RNA–Protein interactions for RNA: ENST00000420892.1

HTRA1-202, Transcript of HtrA serine peptidase 1, humanhuman

TSL 2

Gene HTRA1, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA1-202ENST00000420892 NISCHQ9Y2I1 1504 aa32.67■■■□□ 2.82
HTRA1-202ENST00000420892 CCDC180Q9P1Z9 1646 aa29.04■■■□□ 2.24
HTRA1-202ENST00000420892 ABCC9O60706 1549 aa28.48■■■□□ 2.15
HTRA1-202ENST00000420892 RB1CC1Q8TDY2 1594 aa27.41■■□□□ 1.98
HTRA1-202ENST00000420892 DCAF8L2P0C7V8 631 aa27.39■■□□□ 1.98
HTRA1-202ENST00000420892 NACADO15069 1562 aa27.37■■□□□ 1.97
HTRA1-202ENST00000420892 MYO15BQ96JP2 1530 aa27.22■■□□□ 1.95
HTRA1-202ENST00000420892 ZCCHC6Q5VYS8 1495 aaKnown RBP27.19■■□□□ 1.94
HTRA1-202ENST00000420892 DCAF1Q9Y4B6 1507 aa27.06■■□□□ 1.92
HTRA1-202ENST00000420892 PABPN1Q86U42 306 aaKnown RBP eCLIP26.63■■□□□ 1.85
HTRA1-202ENST00000420892 UNC13AQ9UPW8 1703 aa26.59■■□□□ 1.85
HTRA1-202ENST00000420892 BICRAQ9NZM4 1560 aa26.49■■□□□ 1.83
HTRA1-202ENST00000420892 SCRIBQ14160 1630 aa26.47■■□□□ 1.83
HTRA1-202ENST00000420892 SHROOM4Q9ULL8 1493 aa26.36■■□□□ 1.81
HTRA1-202ENST00000420892 DNAJC5BQ9UF47 199 aa26.16■■□□□ 1.78
HTRA1-202ENST00000420892 EIF4G1Q04637 1599 aaKnown RBP25.84■■□□□ 1.73
HTRA1-202ENST00000420892 CC2D2AQ9P2K1 1620 aa25.73■■□□□ 1.71
HTRA1-202ENST00000420892 CECR2Q9BXF3 1484 aa25.63■■□□□ 1.69
HTRA1-202ENST00000420892 BAZ1AQ9NRL2 1556 aaPredicted RBP25.35■■□□□ 1.65
HTRA1-202ENST00000420892 SMARCA4P51532 1647 aa25.33■■□□□ 1.65
HTRA1-202ENST00000420892 NCAPD3P42695 1498 aa25.27■■□□□ 1.64
HTRA1-202ENST00000420892 ATAD2BQ9ULI0 1458 aa25.25■■□□□ 1.63
HTRA1-202ENST00000420892 SMARCA2P51531 1590 aa25.24■■□□□ 1.63
HTRA1-202ENST00000420892 MROH2BQ7Z745 1585 aa25.14■■□□□ 1.61
HTRA1-202ENST00000420892 HMGXB3Q12766 1538 aa25.12■■□□□ 1.61
HTRA1-202ENST00000420892 PEG3Q9GZU2 1588 aa25.1■■□□□ 1.61
HTRA1-202ENST00000420892 BAZ1BQ9UIG0 1483 aaKnown RBP25.06■■□□□ 1.6
HTRA1-202ENST00000420892 RSF1Q96T23 1441 aaPredicted RBP24.87■■□□□ 1.57
HTRA1-202ENST00000420892 WIZO95785 1651 aa24.82■■□□□ 1.56
HTRA1-202ENST00000420892 TOP2AP11388 1531 aaKnown RBP24.63■■□□□ 1.53
HTRA1-202ENST00000420892 ERCC6Q03468 1493 aa24.62■■□□□ 1.53
HTRA1-202ENST00000420892 LAMC3Q9Y6N6 1575 aa24.59■■□□□ 1.53
HTRA1-202ENST00000420892 NESP48681 1621 aa24.59■■□□□ 1.53
HTRA1-202ENST00000420892 CADPSQ9ULU8 1353 aa24.54■■□□□ 1.52
HTRA1-202ENST00000420892 PDS5BQ9NTI5 1447 aa24.5■■□□□ 1.51
HTRA1-202ENST00000420892 CUX2O14529 1486 aa24.38■■□□□ 1.49
HTRA1-202ENST00000420892 CFTRP13569 1480 aa24.36■■□□□ 1.49
HTRA1-202ENST00000420892 CCDC88BA6NC98 1476 aa24.35■■□□□ 1.49
HTRA1-202ENST00000420892 SUPT5HO00267 1087 aaKnown RBP24.25■■□□□ 1.47
HTRA1-202ENST00000420892 KIF21AQ7Z4S6 1674 aa24.24■■□□□ 1.47
HTRA1-202ENST00000420892 FANCD2Q9BXW9 1451 aa24.24■■□□□ 1.47
HTRA1-202ENST00000420892 THOC2Q8NI27 1593 aaKnown RBP24.22■■□□□ 1.47
HTRA1-202ENST00000420892 CEP164Q9UPV0 1460 aa24.22■■□□□ 1.47
HTRA1-202ENST00000420892 MRC2Q9UBG0 1479 aa24.19■■□□□ 1.46
HTRA1-202ENST00000420892 WDR62O43379 1518 aa24.07■■□□□ 1.44
HTRA1-202ENST00000420892 PRDM2Q13029 1718 aa24.04■■□□□ 1.44
HTRA1-202ENST00000420892 URB2Q14146 1524 aaKnown RBP23.95■■□□□ 1.43
HTRA1-202ENST00000420892 ABCC8Q09428 1581 aa23.91■■□□□ 1.42
HTRA1-202ENST00000420892 TOPBP1Q92547 1522 aa23.82■■□□□ 1.4
HTRA1-202ENST00000420892 DNMBPQ6XZF7 1577 aa23.79■■□□□ 1.4
HTRA1-202ENST00000420892 IFT140Q96RY7 1462 aa23.74■■□□□ 1.39
HTRA1-202ENST00000420892 DNAJC5Q9H3Z4 198 aa23.69■■□□□ 1.38
HTRA1-202ENST00000420892 POLA1P09884 1462 aaPredicted RBP23.62■■□□□ 1.37
HTRA1-202ENST00000420892 CUX1P39880 1505 aa23.59■■□□□ 1.37
HTRA1-202ENST00000420892 SOGA1O94964 1423 aa23.57■■□□□ 1.36
HTRA1-202ENST00000420892 FGD5Q6ZNL6 1462 aa23.55■■□□□ 1.36
HTRA1-202ENST00000420892 ZNF608Q9ULD9 1512 aaPredicted RBP23.54■■□□□ 1.36
HTRA1-202ENST00000420892 TARBP1Q13395 1621 aaKnown RBP23.52■■□□□ 1.36
HTRA1-202ENST00000420892 RAD54L2Q9Y4B4 1467 aa23.49■■□□□ 1.35
HTRA1-202ENST00000420892 WRNQ14191 1432 aaPredicted RBP eCLIP23.49■■□□□ 1.35
HTRA1-202ENST00000420892 EIF4G3O43432 1585 aaKnown RBP23.44■■□□□ 1.34
HTRA1-202ENST00000420892 AQRO60306 1485 aaKnown RBP eCLIP23.44■■□□□ 1.34
HTRA1-202ENST00000420892 WDR97A6NE52 1622 aa23.42■■□□□ 1.34
HTRA1-202ENST00000420892 TDRD9Q8NDG6 1382 aaKnown RBP23.41■■□□□ 1.34
HTRA1-202ENST00000420892 OSCARQ8IYS5 282 aa23.4■■□□□ 1.34
HTRA1-202ENST00000420892 TOP2BQ02880 1626 aa23.39■■□□□ 1.33
HTRA1-202ENST00000420892 BIVM-ERCC5R4GMW8 1640 aa23.36■■□□□ 1.33
HTRA1-202ENST00000420892 ABCA10Q8WWZ4 1543 aa23.34■■□□□ 1.33
HTRA1-202ENST00000420892 SYNJ1O43426 1573 aa23.34■■□□□ 1.33
HTRA1-202ENST00000420892 GRIN2BQ13224 1484 aa23.3■■□□□ 1.32
HTRA1-202ENST00000420892 GAPVD1Q14C86 1478 aa23.28■■□□□ 1.32
HTRA1-202ENST00000420892 FBLN2P98095 1184 aa23.25■■□□□ 1.31
HTRA1-202ENST00000420892 MAGI1Q96QZ7 1491 aaPredicted RBP23.24■■□□□ 1.31
HTRA1-202ENST00000420892 SNAPC4Q5SXM2 1469 aa23.23■■□□□ 1.31
HTRA1-202ENST00000420892 CHMP7Q8WUX9 453 aaPredicted RBP23.2■■□□□ 1.3
HTRA1-202ENST00000420892 ABCA5Q8WWZ7 1642 aa23.19■■□□□ 1.3
HTRA1-202ENST00000420892 SYNJ2O15056 1496 aa23.14■■□□□ 1.29
HTRA1-202ENST00000420892 PBRM1Q86U86 1689 aa23.12■■□□□ 1.29
HTRA1-202ENST00000420892 CHD1O14646 1710 aa23.11■■□□□ 1.29
HTRA1-202ENST00000420892 ERICH3Q5RHP9 1530 aa23.08■■□□□ 1.28
HTRA1-202ENST00000420892 FHAD1B1AJZ9 1412 aa23.03■■□□□ 1.28
HTRA1-202ENST00000420892 KIF27Q86VH2 1401 aa23.03■■□□□ 1.28
HTRA1-202ENST00000420892 ADAMTS12P58397 1594 aa22.98■■□□□ 1.27
HTRA1-202ENST00000420892 GRIN2AQ12879 1464 aa22.97■■□□□ 1.27
HTRA1-202ENST00000420892 TRIM41Q8WV44 630 aa22.95■■□□□ 1.26
HTRA1-202ENST00000420892 ARHGEF11O15085 1522 aa22.92■■□□□ 1.26
HTRA1-202ENST00000420892 CLASP1Q7Z460 1538 aa22.92■■□□□ 1.26
HTRA1-202ENST00000420892 IGF1RP08069 1367 aa22.91■■□□□ 1.26
HTRA1-202ENST00000420892 RIMBP3CA6NJZ7 1639 aa22.9■■□□□ 1.26
HTRA1-202ENST00000420892 RIMBP3BA6NNM3 1639 aa22.9■■□□□ 1.26
HTRA1-202ENST00000420892 RIMBP3Q9UFD9 1639 aa22.9■■□□□ 1.26
HTRA1-202ENST00000420892 NUP160Q12769 1436 aa22.87■■□□□ 1.25
HTRA1-202ENST00000420892 CUL7Q14999 1698 aa22.82■■□□□ 1.24
HTRA1-202ENST00000420892 CARMIL1Q5VZK9 1371 aa22.8■■□□□ 1.24
HTRA1-202ENST00000420892 CEP170Q5SW79 1584 aa22.8■■□□□ 1.24
HTRA1-202ENST00000420892 CYB5RLQ6IPT4 315 aa22.78■■□□□ 1.24
HTRA1-202ENST00000420892 ARAP1Q96P48 1450 aa22.73■■□□□ 1.23
HTRA1-202ENST00000420892 JPH4Q96JJ6 628 aa22.69■■□□□ 1.22
HTRA1-202ENST00000420892 RUSC2Q8N2Y8 1516 aa22.68■■□□□ 1.22
HTRA1-202ENST00000420892 KIAA0586Q9BVV6 1533 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms