RNA–Protein interactions for RNA: ENST00000420869.2

TRIM49D1-201, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TRIM49D1, Length 1,651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-201ENST00000420869 NISCHQ9Y2I1 1504 aa18.72■□□□□ 0.59
TRIM49D1-201ENST00000420869 CCDC180Q9P1Z9 1646 aa16.27■□□□□ 0.19
TRIM49D1-201ENST00000420869 ZCCHC6Q5VYS8 1495 aaKnown RBP15.88■□□□□ 0.13
TRIM49D1-201ENST00000420869 DCAF1Q9Y4B6 1507 aa15.53■□□□□ 0.08
TRIM49D1-201ENST00000420869 SHROOM4Q9ULL8 1493 aa15.51■□□□□ 0.07
TRIM49D1-201ENST00000420869 MYO15BQ96JP2 1530 aa15.11■□□□□ 0.01
TRIM49D1-201ENST00000420869 SUPT5HO00267 1087 aaKnown RBP15.11■□□□□ 0.01
TRIM49D1-201ENST00000420869 ABCC9O60706 1549 aa15.06■□□□□ 0
TRIM49D1-201ENST00000420869 DCAF8L2P0C7V8 631 aa14.97□□□□□ -0.01
TRIM49D1-201ENST00000420869 SCRIBQ14160 1630 aa14.92□□□□□ -0.02
TRIM49D1-201ENST00000420869 NACADO15069 1562 aa14.85□□□□□ -0.03
TRIM49D1-201ENST00000420869 CHIC1Q5VXU3 224 aa14.84□□□□□ -0.03
TRIM49D1-201ENST00000420869 UNC13AQ9UPW8 1703 aa14.67□□□□□ -0.06
TRIM49D1-201ENST00000420869 RB1CC1Q8TDY2 1594 aa14.67□□□□□ -0.06
TRIM49D1-201ENST00000420869 RSF1Q96T23 1441 aaPredicted RBP14.67□□□□□ -0.06
TRIM49D1-201ENST00000420869 WIZO95785 1651 aa14.52□□□□□ -0.08
TRIM49D1-201ENST00000420869 BAZ1AQ9NRL2 1556 aaPredicted RBP14.51□□□□□ -0.09
TRIM49D1-201ENST00000420869 MROH2BQ7Z745 1585 aa14.5□□□□□ -0.09
TRIM49D1-201ENST00000420869 CECR2Q9BXF3 1484 aa14.48□□□□□ -0.09
TRIM49D1-201ENST00000420869 EIF4G1Q04637 1599 aaKnown RBP14.46□□□□□ -0.1
TRIM49D1-201ENST00000420869 SMARCA4P51532 1647 aa14.38□□□□□ -0.11
TRIM49D1-201ENST00000420869 TOP2AP11388 1531 aaKnown RBP14.31□□□□□ -0.12
TRIM49D1-201ENST00000420869 HRCP23327 699 aa14.27□□□□□ -0.12
TRIM49D1-201ENST00000420869 LOC105371045A0A1W2PR82 267 aa14.24□□□□□ -0.13
TRIM49D1-201ENST00000420869 BICRAQ9NZM4 1560 aa14.24□□□□□ -0.13
TRIM49D1-201ENST00000420869 SMARCA2P51531 1590 aa14.23□□□□□ -0.13
TRIM49D1-201ENST00000420869 PEG3Q9GZU2 1588 aa14.17□□□□□ -0.14
TRIM49D1-201ENST00000420869 TRIM41Q8WV44 630 aa14.17□□□□□ -0.14
TRIM49D1-201ENST00000420869 PCGF6Q9BYE7 350 aa14.16□□□□□ -0.14
TRIM49D1-201ENST00000420869 CCDC88BA6NC98 1476 aa14.09□□□□□ -0.15
TRIM49D1-201ENST00000420869 ABCC8Q09428 1581 aa14.06□□□□□ -0.16
TRIM49D1-201ENST00000420869 TRIM26Q12899 539 aaPredicted RBP14.04□□□□□ -0.16
TRIM49D1-201ENST00000420869 FAM9AQ8IZU1 332 aaPredicted RBP13.91□□□□□ -0.18
TRIM49D1-201ENST00000420869 EEA1Q15075 1411 aa13.88□□□□□ -0.19
TRIM49D1-201ENST00000420869 PRDM2Q13029 1718 aa13.87□□□□□ -0.19
TRIM49D1-201ENST00000420869 SYNJ1O43426 1573 aa13.86□□□□□ -0.19
TRIM49D1-201ENST00000420869 ATAD2BQ9ULI0 1458 aa13.86□□□□□ -0.19
TRIM49D1-201ENST00000420869 PPARGC1BQ86YN6 1023 aaKnown RBP13.84□□□□□ -0.19
TRIM49D1-201ENST00000420869 KIF21BO75037 1637 aa13.84□□□□□ -0.19
TRIM49D1-201ENST00000420869 WRNQ14191 1432 aaPredicted RBP eCLIP13.83□□□□□ -0.2
TRIM49D1-201ENST00000420869 BIVM-ERCC5R4GMW8 1640 aa13.82□□□□□ -0.2
TRIM49D1-201ENST00000420869 BAZ1BQ9UIG0 1483 aaKnown RBP13.81□□□□□ -0.2
TRIM49D1-201ENST00000420869 SOGA1O94964 1423 aa13.78□□□□□ -0.2
TRIM49D1-201ENST00000420869 HMGXB3Q12766 1538 aa13.77□□□□□ -0.2
TRIM49D1-201ENST00000420869 PABPN1Q86U42 306 aaKnown RBP eCLIP13.77□□□□□ -0.21
TRIM49D1-201ENST00000420869 RUSC2Q8N2Y8 1516 aa13.76□□□□□ -0.21
TRIM49D1-201ENST00000420869 TOP2BQ02880 1626 aa13.75□□□□□ -0.21
TRIM49D1-201ENST00000420869 TNIKQ9UKE5 1360 aa13.75□□□□□ -0.21
TRIM49D1-201ENST00000420869 ZEB1P37275 1124 aaPredicted RBP13.75□□□□□ -0.21
TRIM49D1-201ENST00000420869 CEP162Q5TB80 1403 aa13.74□□□□□ -0.21
TRIM49D1-201ENST00000420869 GOLGA3Q08378 1498 aa13.73□□□□□ -0.21
TRIM49D1-201ENST00000420869 EHMT2Q96KQ7 1210 aa13.68□□□□□ -0.22
TRIM49D1-201ENST00000420869 CEP164Q9UPV0 1460 aa13.67□□□□□ -0.22
TRIM49D1-201ENST00000420869 CSRNP3Q8WYN3 585 aa13.63□□□□□ -0.23
TRIM49D1-201ENST00000420869 NCAPD3P42695 1498 aa13.63□□□□□ -0.23
TRIM49D1-201ENST00000420869 ERICH3Q5RHP9 1530 aa13.59□□□□□ -0.23
TRIM49D1-201ENST00000420869 CUX1P39880 1505 aa13.54□□□□□ -0.24
TRIM49D1-201ENST00000420869 RAPGEF2Q9Y4G8 1499 aa13.51□□□□□ -0.25
TRIM49D1-201ENST00000420869 CFTRP13569 1480 aa13.49□□□□□ -0.25
TRIM49D1-201ENST00000420869 VPS8Q8N3P4 1428 aa13.49□□□□□ -0.25
TRIM49D1-201ENST00000420869 CLIP1P30622 1438 aa13.48□□□□□ -0.25
TRIM49D1-201ENST00000420869 PRXQ9BXM0 1461 aa13.47□□□□□ -0.25
TRIM49D1-201ENST00000420869 UBTFP17480 764 aaKnown RBP13.46□□□□□ -0.26
TRIM49D1-201ENST00000420869 ARAP1Q96P48 1450 aa13.39□□□□□ -0.27
TRIM49D1-201ENST00000420869 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.38□□□□□ -0.27
TRIM49D1-201ENST00000420869 CC2D2AQ9P2K1 1620 aa13.38□□□□□ -0.27
TRIM49D1-201ENST00000420869 CCER1Q8TC90 406 aaPredicted RBP13.34□□□□□ -0.27
TRIM49D1-201ENST00000420869 KIF27Q86VH2 1401 aa13.34□□□□□ -0.27
TRIM49D1-201ENST00000420869 WDR97A6NE52 1622 aa13.32□□□□□ -0.28
TRIM49D1-201ENST00000420869 CTTNBP2Q8WZ74 1663 aa13.3□□□□□ -0.28
TRIM49D1-201ENST00000420869 CFAP43Q8NDM7 1665 aa13.29□□□□□ -0.28
TRIM49D1-201ENST00000420869 DNMBPQ6XZF7 1577 aa13.27□□□□□ -0.29
TRIM49D1-201ENST00000420869 TTBK1Q5TCY1 1321 aaPredicted RBP13.27□□□□□ -0.29
TRIM49D1-201ENST00000420869 FGD5Q6ZNL6 1462 aa13.26□□□□□ -0.29
TRIM49D1-201ENST00000420869 CADPSQ9ULU8 1353 aa13.26□□□□□ -0.29
TRIM49D1-201ENST00000420869 ARHGAP35Q9NRY4 1499 aa13.25□□□□□ -0.29
TRIM49D1-201ENST00000420869 CUL7Q14999 1698 aa13.25□□□□□ -0.29
TRIM49D1-201ENST00000420869 MAP3K1Q13233 1512 aa13.22□□□□□ -0.29
TRIM49D1-201ENST00000420869 CUX2O14529 1486 aa13.21□□□□□ -0.29
TRIM49D1-201ENST00000420869 TIAM1Q13009 1591 aa13.21□□□□□ -0.29
TRIM49D1-201ENST00000420869 AEBP2Q6ZN18 517 aaPredicted RBP13.21□□□□□ -0.3
TRIM49D1-201ENST00000420869 RRBP1Q9P2E9 1410 aaKnown RBP13.19□□□□□ -0.3
TRIM49D1-201ENST00000420869 LAMC3Q9Y6N6 1575 aa13.18□□□□□ -0.3
TRIM49D1-201ENST00000420869 FANCD2Q9BXW9 1451 aa13.17□□□□□ -0.3
TRIM49D1-201ENST00000420869 ABCA10Q8WWZ4 1543 aa13.16□□□□□ -0.3
TRIM49D1-201ENST00000420869 APLP2Q06481 763 aa13.15□□□□□ -0.3
TRIM49D1-201ENST00000420869 IGF1RP08069 1367 aa13.15□□□□□ -0.3
TRIM49D1-201ENST00000420869 TOPBP1Q92547 1522 aa13.15□□□□□ -0.3
TRIM49D1-201ENST00000420869 PCF11O94913 1555 aaKnown RBP13.14□□□□□ -0.31
TRIM49D1-201ENST00000420869 KIF21AQ7Z4S6 1674 aa13.14□□□□□ -0.31
TRIM49D1-201ENST00000420869 ABCA5Q8WWZ7 1642 aa13.14□□□□□ -0.31
TRIM49D1-201ENST00000420869 LRRIQ1Q96JM4 1722 aa13.13□□□□□ -0.31
TRIM49D1-201ENST00000420869 EFCAB5A4FU69 1503 aa13.12□□□□□ -0.31
TRIM49D1-201ENST00000420869 POLA1P09884 1462 aaPredicted RBP13.11□□□□□ -0.31
TRIM49D1-201ENST00000420869 HNRNPUL2Q1KMD3 747 aaKnown RBP13.09□□□□□ -0.31
TRIM49D1-201ENST00000420869 DIEXFQ68CQ4 756 aaKnown RBP13.09□□□□□ -0.31
TRIM49D1-201ENST00000420869 CARMIL1Q5VZK9 1371 aa13.09□□□□□ -0.31
TRIM49D1-201ENST00000420869 CLSPNQ9HAW4 1339 aa13.08□□□□□ -0.32
TRIM49D1-201ENST00000420869 PBRM1Q86U86 1689 aa13.07□□□□□ -0.32
TRIM49D1-201ENST00000420869 NESP48681 1621 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms