RNA–Protein interactions for RNA: ENST00000420854.1

IFT172-204, Transcript of intraflagellar transport 172, humanhuman

TSL 5

Gene IFT172, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT172-204ENST00000420854 NISCHQ9Y2I1 1504 aa17.22■□□□□ 0.35
IFT172-204ENST00000420854 CHIC1Q5VXU3 224 aa16.17■□□□□ 0.18
IFT172-204ENST00000420854 AEBP2Q6ZN18 517 aaPredicted RBP16.12■□□□□ 0.17
IFT172-204ENST00000420854 CCDC180Q9P1Z9 1646 aa15.12■□□□□ 0.01
IFT172-204ENST00000420854 ABCC9O60706 1549 aa15.03■□□□□ -0
IFT172-204ENST00000420854 DCAF8L2P0C7V8 631 aa14.55□□□□□ -0.08
IFT172-204ENST00000420854 ZCCHC6Q5VYS8 1495 aaKnown RBP14.34□□□□□ -0.11
IFT172-204ENST00000420854 RB1CC1Q8TDY2 1594 aa14.3□□□□□ -0.12
IFT172-204ENST00000420854 NACADO15069 1562 aa14.29□□□□□ -0.12
IFT172-204ENST00000420854 MYO15BQ96JP2 1530 aa14.18□□□□□ -0.14
IFT172-204ENST00000420854 PABPN1Q86U42 306 aaKnown RBP eCLIP14.15□□□□□ -0.14
IFT172-204ENST00000420854 DCAF1Q9Y4B6 1507 aa14.15□□□□□ -0.14
IFT172-204ENST00000420854 PHF23Q9BUL5 403 aaPredicted RBP14.11□□□□□ -0.15
IFT172-204ENST00000420854 SCRIBQ14160 1630 aa13.98□□□□□ -0.17
IFT172-204ENST00000420854 BICRAQ9NZM4 1560 aa13.96□□□□□ -0.18
IFT172-204ENST00000420854 UNC13AQ9UPW8 1703 aa13.93□□□□□ -0.18
IFT172-204ENST00000420854 DNAJC5BQ9UF47 199 aa13.91□□□□□ -0.18
IFT172-204ENST00000420854 SENP3Q9H4L4 574 aaPredicted RBP13.88□□□□□ -0.19
IFT172-204ENST00000420854 SHROOM4Q9ULL8 1493 aa13.81□□□□□ -0.2
IFT172-204ENST00000420854 EIF4G1Q04637 1599 aaKnown RBP13.56□□□□□ -0.24
IFT172-204ENST00000420854 CECR2Q9BXF3 1484 aa13.53□□□□□ -0.24
IFT172-204ENST00000420854 CC2D2AQ9P2K1 1620 aa13.5□□□□□ -0.25
IFT172-204ENST00000420854 PLPPR3Q6T4P5 718 aa13.36□□□□□ -0.27
IFT172-204ENST00000420854 MROH2BQ7Z745 1585 aa13.33□□□□□ -0.28
IFT172-204ENST00000420854 SMARCA4P51532 1647 aa13.31□□□□□ -0.28
IFT172-204ENST00000420854 ATAD2BQ9ULI0 1458 aa13.3□□□□□ -0.28
IFT172-204ENST00000420854 BAZ1AQ9NRL2 1556 aaPredicted RBP13.28□□□□□ -0.28
IFT172-204ENST00000420854 NCAPD3P42695 1498 aa13.27□□□□□ -0.29
IFT172-204ENST00000420854 RSF1Q96T23 1441 aaPredicted RBP13.21□□□□□ -0.3
IFT172-204ENST00000420854 SMARCA2P51531 1590 aa13.19□□□□□ -0.3
IFT172-204ENST00000420854 BAZ1BQ9UIG0 1483 aaKnown RBP13.16□□□□□ -0.3
IFT172-204ENST00000420854 PEG3Q9GZU2 1588 aa13.15□□□□□ -0.3
IFT172-204ENST00000420854 WIZO95785 1651 aa13.14□□□□□ -0.31
IFT172-204ENST00000420854 HMGXB3Q12766 1538 aa13.13□□□□□ -0.31
IFT172-204ENST00000420854 NESP48681 1621 aa13.04□□□□□ -0.32
IFT172-204ENST00000420854 SUPT5HO00267 1087 aaKnown RBP13□□□□□ -0.33
IFT172-204ENST00000420854 TOP2AP11388 1531 aaKnown RBP12.97□□□□□ -0.33
IFT172-204ENST00000420854 CADPSQ9ULU8 1353 aa12.92□□□□□ -0.34
IFT172-204ENST00000420854 CCDC88BA6NC98 1476 aa12.9□□□□□ -0.34
IFT172-204ENST00000420854 ERCC6Q03468 1493 aa12.89□□□□□ -0.35
IFT172-204ENST00000420854 CFTRP13569 1480 aa12.82□□□□□ -0.36
IFT172-204ENST00000420854 LAMC3Q9Y6N6 1575 aa12.81□□□□□ -0.36
IFT172-204ENST00000420854 PDS5BQ9NTI5 1447 aa12.79□□□□□ -0.36
IFT172-204ENST00000420854 FANCD2Q9BXW9 1451 aa12.75□□□□□ -0.37
IFT172-204ENST00000420854 KIF21AQ7Z4S6 1674 aa12.72□□□□□ -0.37
IFT172-204ENST00000420854 CEP164Q9UPV0 1460 aa12.7□□□□□ -0.38
IFT172-204ENST00000420854 THOC2Q8NI27 1593 aaKnown RBP12.69□□□□□ -0.38
IFT172-204ENST00000420854 MRC2Q9UBG0 1479 aa12.68□□□□□ -0.38
IFT172-204ENST00000420854 FOXD1Q16676 465 aa12.68□□□□□ -0.38
IFT172-204ENST00000420854 CUX2O14529 1486 aa12.67□□□□□ -0.38
IFT172-204ENST00000420854 URB2Q14146 1524 aaKnown RBP12.65□□□□□ -0.38
IFT172-204ENST00000420854 WDR62O43379 1518 aa12.62□□□□□ -0.39
IFT172-204ENST00000420854 TOPBP1Q92547 1522 aa12.55□□□□□ -0.4
IFT172-204ENST00000420854 PRDM2Q13029 1718 aa12.49□□□□□ -0.41
IFT172-204ENST00000420854 CUX1P39880 1505 aa12.48□□□□□ -0.41
IFT172-204ENST00000420854 DNMBPQ6XZF7 1577 aa12.47□□□□□ -0.41
IFT172-204ENST00000420854 ZNF608Q9ULD9 1512 aaPredicted RBP12.47□□□□□ -0.41
IFT172-204ENST00000420854 RAD54L2Q9Y4B4 1467 aa12.47□□□□□ -0.41
IFT172-204ENST00000420854 POLA1P09884 1462 aaPredicted RBP12.46□□□□□ -0.42
IFT172-204ENST00000420854 ABCC8Q09428 1581 aa12.45□□□□□ -0.42
IFT172-204ENST00000420854 FGD5Q6ZNL6 1462 aa12.43□□□□□ -0.42
IFT172-204ENST00000420854 IFT140Q96RY7 1462 aa12.43□□□□□ -0.42
IFT172-204ENST00000420854 AQRO60306 1485 aaKnown RBP eCLIP12.42□□□□□ -0.42
IFT172-204ENST00000420854 SOGA1O94964 1423 aa12.42□□□□□ -0.42
IFT172-204ENST00000420854 TDRD9Q8NDG6 1382 aaKnown RBP12.42□□□□□ -0.42
IFT172-204ENST00000420854 WRNQ14191 1432 aaPredicted RBP eCLIP12.41□□□□□ -0.42
IFT172-204ENST00000420854 ADRA2BP18089 450 aa12.4□□□□□ -0.42
IFT172-204ENST00000420854 DNAJC5Q9H3Z4 198 aa12.38□□□□□ -0.43
IFT172-204ENST00000420854 SYNJ1O43426 1573 aa12.37□□□□□ -0.43
IFT172-204ENST00000420854 TARBP1Q13395 1621 aaKnown RBP12.37□□□□□ -0.43
IFT172-204ENST00000420854 PPP6R1Q9UPN7 881 aa12.34□□□□□ -0.43
IFT172-204ENST00000420854 EIF4G3O43432 1585 aaKnown RBP12.3□□□□□ -0.44
IFT172-204ENST00000420854 TOP2BQ02880 1626 aa12.3□□□□□ -0.44
IFT172-204ENST00000420854 FBLN2P98095 1184 aa12.29□□□□□ -0.44
IFT172-204ENST00000420854 ABCA10Q8WWZ4 1543 aa12.27□□□□□ -0.44
IFT172-204ENST00000420854 BIVM-ERCC5R4GMW8 1640 aa12.26□□□□□ -0.45
IFT172-204ENST00000420854 OSCARQ8IYS5 282 aa12.26□□□□□ -0.45
IFT172-204ENST00000420854 GAPVD1Q14C86 1478 aa12.25□□□□□ -0.45
IFT172-204ENST00000420854 SNAPC4Q5SXM2 1469 aa12.25□□□□□ -0.45
IFT172-204ENST00000420854 GRIN2BQ13224 1484 aa12.22□□□□□ -0.45
IFT172-204ENST00000420854 WDR97A6NE52 1622 aa12.2□□□□□ -0.46
IFT172-204ENST00000420854 CHMP7Q8WUX9 453 aaPredicted RBP12.2□□□□□ -0.46
IFT172-204ENST00000420854 TRIM41Q8WV44 630 aa12.19□□□□□ -0.46
IFT172-204ENST00000420854 ABCA5Q8WWZ7 1642 aa12.19□□□□□ -0.46
IFT172-204ENST00000420854 RUSC2Q8N2Y8 1516 aa12.16□□□□□ -0.46
IFT172-204ENST00000420854 MAGI1Q96QZ7 1491 aaPredicted RBP12.15□□□□□ -0.46
IFT172-204ENST00000420854 IGF1RP08069 1367 aa12.15□□□□□ -0.46
IFT172-204ENST00000420854 SYNJ2O15056 1496 aa12.14□□□□□ -0.47
IFT172-204ENST00000420854 PIAS4Q8N2W9 510 aaPredicted RBP12.13□□□□□ -0.47
IFT172-204ENST00000420854 KIF27Q86VH2 1401 aa12.12□□□□□ -0.47
IFT172-204ENST00000420854 CHD1O14646 1710 aa12.1□□□□□ -0.47
IFT172-204ENST00000420854 FHAD1B1AJZ9 1412 aa12.1□□□□□ -0.47
IFT172-204ENST00000420854 PBRM1Q86U86 1689 aa12.1□□□□□ -0.47
IFT172-204ENST00000420854 ERICH3Q5RHP9 1530 aa12.08□□□□□ -0.48
IFT172-204ENST00000420854 ADAMTS12P58397 1594 aa12.08□□□□□ -0.48
IFT172-204ENST00000420854 GRIN2AQ12879 1464 aa12.08□□□□□ -0.48
IFT172-204ENST00000420854 FAM9AQ8IZU1 332 aaPredicted RBP12.06□□□□□ -0.48
IFT172-204ENST00000420854 CARMIL1Q5VZK9 1371 aa12.05□□□□□ -0.48
IFT172-204ENST00000420854 CLASP1Q7Z460 1538 aa12.03□□□□□ -0.48
IFT172-204ENST00000420854 CEP170Q5SW79 1584 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms