RNA–Protein interactions for RNA: ENST00000420619.5

LDLRAD1-203, Transcript of low density lipoprotein receptor class A domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDLRAD1, Length 2,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD1-203ENST00000420619 NISCHQ9Y2I1 1504 aa30.63■■■□□ 2.49
LDLRAD1-203ENST00000420619 CCDC180Q9P1Z9 1646 aa26.81■■□□□ 1.88
LDLRAD1-203ENST00000420619 ABCC9O60706 1549 aa25.66■■□□□ 1.7
LDLRAD1-203ENST00000420619 ZCCHC6Q5VYS8 1495 aaKnown RBP25.65■■□□□ 1.7
LDLRAD1-203ENST00000420619 DCAF8L2P0C7V8 631 aa25.44■■□□□ 1.66
LDLRAD1-203ENST00000420619 DCAF1Q9Y4B6 1507 aa25.3■■□□□ 1.64
LDLRAD1-203ENST00000420619 MYO15BQ96JP2 1530 aa25.11■■□□□ 1.61
LDLRAD1-203ENST00000420619 NACADO15069 1562 aa25.05■■□□□ 1.6
LDLRAD1-203ENST00000420619 RB1CC1Q8TDY2 1594 aa24.9■■□□□ 1.58
LDLRAD1-203ENST00000420619 SHROOM4Q9ULL8 1493 aa24.8■■□□□ 1.56
LDLRAD1-203ENST00000420619 SCRIBQ14160 1630 aa24.64■■□□□ 1.53
LDLRAD1-203ENST00000420619 UNC13AQ9UPW8 1703 aa24.44■■□□□ 1.5
LDLRAD1-203ENST00000420619 BICRAQ9NZM4 1560 aa24.21■■□□□ 1.47
LDLRAD1-203ENST00000420619 PABPN1Q86U42 306 aaKnown RBP eCLIP24.19■■□□□ 1.46
LDLRAD1-203ENST00000420619 CECR2Q9BXF3 1484 aa23.86■■□□□ 1.41
LDLRAD1-203ENST00000420619 SUPT5HO00267 1087 aaKnown RBP23.72■■□□□ 1.39
LDLRAD1-203ENST00000420619 MROH2BQ7Z745 1585 aa23.67■■□□□ 1.38
LDLRAD1-203ENST00000420619 RSF1Q96T23 1441 aaPredicted RBP23.67■■□□□ 1.38
LDLRAD1-203ENST00000420619 BAZ1AQ9NRL2 1556 aaPredicted RBP23.65■■□□□ 1.38
LDLRAD1-203ENST00000420619 SMARCA4P51532 1647 aa23.6■■□□□ 1.37
LDLRAD1-203ENST00000420619 EIF4G1Q04637 1599 aaKnown RBP23.48■■□□□ 1.35
LDLRAD1-203ENST00000420619 WIZO95785 1651 aa23.46■■□□□ 1.35
LDLRAD1-203ENST00000420619 PEG3Q9GZU2 1588 aa23.32■■□□□ 1.32
LDLRAD1-203ENST00000420619 ATAD2BQ9ULI0 1458 aa23.3■■□□□ 1.32
LDLRAD1-203ENST00000420619 SMARCA2P51531 1590 aa23.24■■□□□ 1.31
LDLRAD1-203ENST00000420619 CC2D2AQ9P2K1 1620 aa23.21■■□□□ 1.31
LDLRAD1-203ENST00000420619 TOP2AP11388 1531 aaKnown RBP23.17■■□□□ 1.3
LDLRAD1-203ENST00000420619 NCAPD3P42695 1498 aa23.15■■□□□ 1.3
LDLRAD1-203ENST00000420619 BAZ1BQ9UIG0 1483 aaKnown RBP23.13■■□□□ 1.29
LDLRAD1-203ENST00000420619 HMGXB3Q12766 1538 aa23.05■■□□□ 1.28
LDLRAD1-203ENST00000420619 DNAJC5BQ9UF47 199 aa23■■□□□ 1.27
LDLRAD1-203ENST00000420619 CCDC88BA6NC98 1476 aa22.97■■□□□ 1.27
LDLRAD1-203ENST00000420619 CHIC1Q5VXU3 224 aa22.57■■□□□ 1.2
LDLRAD1-203ENST00000420619 CFTRP13569 1480 aa22.55■■□□□ 1.2
LDLRAD1-203ENST00000420619 CADPSQ9ULU8 1353 aa22.55■■□□□ 1.2
LDLRAD1-203ENST00000420619 NESP48681 1621 aa22.46■■□□□ 1.19
LDLRAD1-203ENST00000420619 ABCC8Q09428 1581 aa22.38■■□□□ 1.17
LDLRAD1-203ENST00000420619 LAMC3Q9Y6N6 1575 aa22.38■■□□□ 1.17
LDLRAD1-203ENST00000420619 PRDM2Q13029 1718 aa22.38■■□□□ 1.17
LDLRAD1-203ENST00000420619 TRIM41Q8WV44 630 aa22.32■■□□□ 1.16
LDLRAD1-203ENST00000420619 FANCD2Q9BXW9 1451 aa22.28■■□□□ 1.16
LDLRAD1-203ENST00000420619 WRNQ14191 1432 aaPredicted RBP eCLIP22.26■■□□□ 1.15
LDLRAD1-203ENST00000420619 PDS5BQ9NTI5 1447 aa22.23■■□□□ 1.15
LDLRAD1-203ENST00000420619 SYNJ1O43426 1573 aa22.19■■□□□ 1.14
LDLRAD1-203ENST00000420619 KIF21AQ7Z4S6 1674 aa22.16■■□□□ 1.14
LDLRAD1-203ENST00000420619 CEP164Q9UPV0 1460 aa22.14■■□□□ 1.14
LDLRAD1-203ENST00000420619 CUX1P39880 1505 aa22.14■■□□□ 1.14
LDLRAD1-203ENST00000420619 TOP2BQ02880 1626 aa22.11■■□□□ 1.13
LDLRAD1-203ENST00000420619 BIVM-ERCC5R4GMW8 1640 aa22.08■■□□□ 1.13
LDLRAD1-203ENST00000420619 URB2Q14146 1524 aaKnown RBP22.03■■□□□ 1.12
LDLRAD1-203ENST00000420619 TOPBP1Q92547 1522 aa22.01■■□□□ 1.11
LDLRAD1-203ENST00000420619 DNMBPQ6XZF7 1577 aa22■■□□□ 1.11
LDLRAD1-203ENST00000420619 ERCC6Q03468 1493 aa22■■□□□ 1.11
LDLRAD1-203ENST00000420619 MRC2Q9UBG0 1479 aa21.96■■□□□ 1.11
LDLRAD1-203ENST00000420619 FGD5Q6ZNL6 1462 aa21.93■■□□□ 1.1
LDLRAD1-203ENST00000420619 SOGA1O94964 1423 aa21.92■■□□□ 1.1
LDLRAD1-203ENST00000420619 FAM9AQ8IZU1 332 aaPredicted RBP21.92■■□□□ 1.1
LDLRAD1-203ENST00000420619 RUSC2Q8N2Y8 1516 aa21.88■■□□□ 1.09
LDLRAD1-203ENST00000420619 POLA1P09884 1462 aaPredicted RBP21.88■■□□□ 1.09
LDLRAD1-203ENST00000420619 THOC2Q8NI27 1593 aaKnown RBP21.86■■□□□ 1.09
LDLRAD1-203ENST00000420619 WDR62O43379 1518 aa21.85■■□□□ 1.09
LDLRAD1-203ENST00000420619 RAD54L2Q9Y4B4 1467 aa21.83■■□□□ 1.09
LDLRAD1-203ENST00000420619 CUX2O14529 1486 aa21.75■■□□□ 1.07
LDLRAD1-203ENST00000420619 EEA1Q15075 1411 aa21.75■■□□□ 1.07
LDLRAD1-203ENST00000420619 ABCA10Q8WWZ4 1543 aa21.73■■□□□ 1.07
LDLRAD1-203ENST00000420619 LOC105371045A0A1W2PR82 267 aa21.73■■□□□ 1.07
LDLRAD1-203ENST00000420619 CSRNP3Q8WYN3 585 aa21.73■■□□□ 1.07
LDLRAD1-203ENST00000420619 KIF27Q86VH2 1401 aa21.71■■□□□ 1.07
LDLRAD1-203ENST00000420619 TARBP1Q13395 1621 aaKnown RBP21.71■■□□□ 1.07
LDLRAD1-203ENST00000420619 WDR97A6NE52 1622 aa21.67■■□□□ 1.06
LDLRAD1-203ENST00000420619 TDRD9Q8NDG6 1382 aaKnown RBP21.65■■□□□ 1.06
LDLRAD1-203ENST00000420619 IFT140Q96RY7 1462 aa21.64■■□□□ 1.06
LDLRAD1-203ENST00000420619 EHMT2Q96KQ7 1210 aa21.64■■□□□ 1.05
LDLRAD1-203ENST00000420619 IGF1RP08069 1367 aa21.61■■□□□ 1.05
LDLRAD1-203ENST00000420619 ZNF608Q9ULD9 1512 aaPredicted RBP21.57■■□□□ 1.04
LDLRAD1-203ENST00000420619 ABCA5Q8WWZ7 1642 aa21.57■■□□□ 1.04
LDLRAD1-203ENST00000420619 AQRO60306 1485 aaKnown RBP eCLIP21.57■■□□□ 1.04
LDLRAD1-203ENST00000420619 GAPVD1Q14C86 1478 aa21.56■■□□□ 1.04
LDLRAD1-203ENST00000420619 PRXQ9BXM0 1461 aa21.51■■□□□ 1.03
LDLRAD1-203ENST00000420619 KIF21BO75037 1637 aa21.49■■□□□ 1.03
LDLRAD1-203ENST00000420619 CARMIL1Q5VZK9 1371 aa21.47■■□□□ 1.03
LDLRAD1-203ENST00000420619 RAPGEF2Q9Y4G8 1499 aa21.47■■□□□ 1.03
LDLRAD1-203ENST00000420619 ERICH3Q5RHP9 1530 aa21.46■■□□□ 1.03
LDLRAD1-203ENST00000420619 EIF4G3O43432 1585 aaKnown RBP21.45■■□□□ 1.02
LDLRAD1-203ENST00000420619 GOLGA3Q08378 1498 aa21.44■■□□□ 1.02
LDLRAD1-203ENST00000420619 PBRM1Q86U86 1689 aa21.44■■□□□ 1.02
LDLRAD1-203ENST00000420619 GRIN2BQ13224 1484 aa21.42■■□□□ 1.02
LDLRAD1-203ENST00000420619 UBTFP17480 764 aaKnown RBP21.42■■□□□ 1.02
LDLRAD1-203ENST00000420619 CUL7Q14999 1698 aa21.39■■□□□ 1.01
LDLRAD1-203ENST00000420619 TNIKQ9UKE5 1360 aa21.35■■□□□ 1.01
LDLRAD1-203ENST00000420619 SNAPC4Q5SXM2 1469 aa21.32■■□□□ 1
LDLRAD1-203ENST00000420619 FHAD1B1AJZ9 1412 aa21.31■■□□□ 1
LDLRAD1-203ENST00000420619 ADAMTS12P58397 1594 aa21.3■■□□□ 1
LDLRAD1-203ENST00000420619 MAGI1Q96QZ7 1491 aaPredicted RBP21.27■■□□□ 1
LDLRAD1-203ENST00000420619 CEP162Q5TB80 1403 aa21.21■□□□□ 0.99
LDLRAD1-203ENST00000420619 CHMP7Q8WUX9 453 aaPredicted RBP21.2■□□□□ 0.98
LDLRAD1-203ENST00000420619 SYNJ2O15056 1496 aa21.2■□□□□ 0.98
LDLRAD1-203ENST00000420619 RANGAP1P46060 587 aaPredicted RBP21.18■□□□□ 0.98
LDLRAD1-203ENST00000420619 FBLN2P98095 1184 aa21.18■□□□□ 0.98
LDLRAD1-203ENST00000420619 GRIN2AQ12879 1464 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms