RNA–Protein interactions for RNA: ENST00000420364.1

LINC00189-201, long intergenic non-protein coding RNA 189, humanhuman

TSL 1 (best) BASIC

Gene LINC00189, Length 989 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00189-201ENST00000420364 NISCHQ9Y2I1 1504 aa30.06■■■□□ 2.4
LINC00189-201ENST00000420364 AEBP2Q6ZN18 517 aaPredicted RBP28.56■■■□□ 2.16
LINC00189-201ENST00000420364 CHIC1Q5VXU3 224 aa27.72■■■□□ 2.03
LINC00189-201ENST00000420364 CCDC180Q9P1Z9 1646 aa26.66■■□□□ 1.86
LINC00189-201ENST00000420364 ABCC9O60706 1549 aa25.88■■□□□ 1.73
LINC00189-201ENST00000420364 NACADO15069 1562 aa25.1■■□□□ 1.61
LINC00189-201ENST00000420364 DCAF8L2P0C7V8 631 aa25.09■■□□□ 1.61
LINC00189-201ENST00000420364 RB1CC1Q8TDY2 1594 aa25.07■■□□□ 1.6
LINC00189-201ENST00000420364 ZCCHC6Q5VYS8 1495 aaKnown RBP25.06■■□□□ 1.6
LINC00189-201ENST00000420364 MYO15BQ96JP2 1530 aa25.05■■□□□ 1.6
LINC00189-201ENST00000420364 DCAF1Q9Y4B6 1507 aa24.96■■□□□ 1.59
LINC00189-201ENST00000420364 SENP3Q9H4L4 574 aaPredicted RBP24.41■■□□□ 1.5
LINC00189-201ENST00000420364 PHF23Q9BUL5 403 aaPredicted RBP24.28■■□□□ 1.48
LINC00189-201ENST00000420364 UNC13AQ9UPW8 1703 aa24.27■■□□□ 1.48
LINC00189-201ENST00000420364 SCRIBQ14160 1630 aa24.24■■□□□ 1.47
LINC00189-201ENST00000420364 PABPN1Q86U42 306 aaKnown RBP eCLIP24.22■■□□□ 1.47
LINC00189-201ENST00000420364 SHROOM4Q9ULL8 1493 aa24.17■■□□□ 1.46
LINC00189-201ENST00000420364 BICRAQ9NZM4 1560 aa24.16■■□□□ 1.46
LINC00189-201ENST00000420364 EIF4G1Q04637 1599 aaKnown RBP23.58■■□□□ 1.37
LINC00189-201ENST00000420364 DNAJC5BQ9UF47 199 aa23.56■■□□□ 1.36
LINC00189-201ENST00000420364 CC2D2AQ9P2K1 1620 aa23.41■■□□□ 1.34
LINC00189-201ENST00000420364 BAZ1AQ9NRL2 1556 aaPredicted RBP23.34■■□□□ 1.33
LINC00189-201ENST00000420364 CECR2Q9BXF3 1484 aa23.31■■□□□ 1.32
LINC00189-201ENST00000420364 SMARCA4P51532 1647 aa23.25■■□□□ 1.31
LINC00189-201ENST00000420364 SMARCA2P51531 1590 aa23.17■■□□□ 1.3
LINC00189-201ENST00000420364 NCAPD3P42695 1498 aa23.16■■□□□ 1.3
LINC00189-201ENST00000420364 ATAD2BQ9ULI0 1458 aa23.13■■□□□ 1.29
LINC00189-201ENST00000420364 MROH2BQ7Z745 1585 aa23.1■■□□□ 1.29
LINC00189-201ENST00000420364 PEG3Q9GZU2 1588 aa23.08■■□□□ 1.29
LINC00189-201ENST00000420364 HMGXB3Q12766 1538 aa23.03■■□□□ 1.28
LINC00189-201ENST00000420364 BAZ1BQ9UIG0 1483 aaKnown RBP22.98■■□□□ 1.27
LINC00189-201ENST00000420364 RSF1Q96T23 1441 aaPredicted RBP22.95■■□□□ 1.26
LINC00189-201ENST00000420364 WIZO95785 1651 aa22.81■■□□□ 1.24
LINC00189-201ENST00000420364 TOP2AP11388 1531 aaKnown RBP22.69■■□□□ 1.22
LINC00189-201ENST00000420364 FOXD1Q16676 465 aa22.6■■□□□ 1.21
LINC00189-201ENST00000420364 LAMC3Q9Y6N6 1575 aa22.5■■□□□ 1.19
LINC00189-201ENST00000420364 CADPSQ9ULU8 1353 aa22.5■■□□□ 1.19
LINC00189-201ENST00000420364 SUPT5HO00267 1087 aaKnown RBP22.49■■□□□ 1.19
LINC00189-201ENST00000420364 PLPPR3Q6T4P5 718 aa22.46■■□□□ 1.19
LINC00189-201ENST00000420364 PDS5BQ9NTI5 1447 aa22.41■■□□□ 1.18
LINC00189-201ENST00000420364 CCDC88BA6NC98 1476 aa22.41■■□□□ 1.18
LINC00189-201ENST00000420364 ERCC6Q03468 1493 aa22.4■■□□□ 1.18
LINC00189-201ENST00000420364 NESP48681 1621 aa22.39■■□□□ 1.18
LINC00189-201ENST00000420364 CFTRP13569 1480 aa22.36■■□□□ 1.17
LINC00189-201ENST00000420364 FANCD2Q9BXW9 1451 aa22.19■■□□□ 1.14
LINC00189-201ENST00000420364 CEP164Q9UPV0 1460 aa22.16■■□□□ 1.14
LINC00189-201ENST00000420364 CUX2O14529 1486 aa22.13■■□□□ 1.13
LINC00189-201ENST00000420364 KIF21AQ7Z4S6 1674 aa22.1■■□□□ 1.13
LINC00189-201ENST00000420364 MRC2Q9UBG0 1479 aa22.09■■□□□ 1.13
LINC00189-201ENST00000420364 PRDM2Q13029 1718 aa22.09■■□□□ 1.13
LINC00189-201ENST00000420364 THOC2Q8NI27 1593 aaKnown RBP22.04■■□□□ 1.12
LINC00189-201ENST00000420364 ABCC8Q09428 1581 aa21.99■■□□□ 1.11
LINC00189-201ENST00000420364 WDR62O43379 1518 aa21.98■■□□□ 1.11
LINC00189-201ENST00000420364 URB2Q14146 1524 aaKnown RBP21.89■■□□□ 1.09
LINC00189-201ENST00000420364 DNMBPQ6XZF7 1577 aa21.82■■□□□ 1.08
LINC00189-201ENST00000420364 TOPBP1Q92547 1522 aa21.82■■□□□ 1.08
LINC00189-201ENST00000420364 IFT140Q96RY7 1462 aa21.72■■□□□ 1.07
LINC00189-201ENST00000420364 WRNQ14191 1432 aaPredicted RBP eCLIP21.68■■□□□ 1.06
LINC00189-201ENST00000420364 CUX1P39880 1505 aa21.66■■□□□ 1.06
LINC00189-201ENST00000420364 POLA1P09884 1462 aaPredicted RBP21.64■■□□□ 1.06
LINC00189-201ENST00000420364 SOGA1O94964 1423 aa21.63■■□□□ 1.05
LINC00189-201ENST00000420364 FGD5Q6ZNL6 1462 aa21.61■■□□□ 1.05
LINC00189-201ENST00000420364 TOP2BQ02880 1626 aa21.57■■□□□ 1.04
LINC00189-201ENST00000420364 BIVM-ERCC5R4GMW8 1640 aa21.54■■□□□ 1.04
LINC00189-201ENST00000420364 TARBP1Q13395 1621 aaKnown RBP21.53■■□□□ 1.04
LINC00189-201ENST00000420364 WDR97A6NE52 1622 aa21.52■■□□□ 1.04
LINC00189-201ENST00000420364 ADRA2BP18089 450 aa21.51■■□□□ 1.03
LINC00189-201ENST00000420364 PPP6R1Q9UPN7 881 aa21.51■■□□□ 1.03
LINC00189-201ENST00000420364 RAD54L2Q9Y4B4 1467 aa21.5■■□□□ 1.03
LINC00189-201ENST00000420364 SYNJ1O43426 1573 aa21.48■■□□□ 1.03
LINC00189-201ENST00000420364 ZNF608Q9ULD9 1512 aaPredicted RBP21.47■■□□□ 1.03
LINC00189-201ENST00000420364 ABCA10Q8WWZ4 1543 aa21.45■■□□□ 1.02
LINC00189-201ENST00000420364 TDRD9Q8NDG6 1382 aaKnown RBP21.43■■□□□ 1.02
LINC00189-201ENST00000420364 AQRO60306 1485 aaKnown RBP eCLIP21.42■■□□□ 1.02
LINC00189-201ENST00000420364 EIF4G3O43432 1585 aaKnown RBP21.41■■□□□ 1.02
LINC00189-201ENST00000420364 GRIN2BQ13224 1484 aa21.36■■□□□ 1.01
LINC00189-201ENST00000420364 GAPVD1Q14C86 1478 aa21.36■■□□□ 1.01
LINC00189-201ENST00000420364 TRIM41Q8WV44 630 aa21.33■■□□□ 1.01
LINC00189-201ENST00000420364 PIAS4Q8N2W9 510 aaPredicted RBP21.32■■□□□ 1
LINC00189-201ENST00000420364 MAGI1Q96QZ7 1491 aaPredicted RBP21.3■■□□□ 1
LINC00189-201ENST00000420364 OSCARQ8IYS5 282 aa21.29■■□□□ 1
LINC00189-201ENST00000420364 ABCA5Q8WWZ7 1642 aa21.28■■□□□ 1
LINC00189-201ENST00000420364 KIF27Q86VH2 1401 aa21.27■■□□□ 1
LINC00189-201ENST00000420364 POTEDQ86YR6 584 aa21.26■□□□□ 0.99
LINC00189-201ENST00000420364 DNAJC5Q9H3Z4 198 aa21.26■□□□□ 0.99
LINC00189-201ENST00000420364 CHMP7Q8WUX9 453 aaPredicted RBP21.23■□□□□ 0.99
LINC00189-201ENST00000420364 SNAPC4Q5SXM2 1469 aa21.23■□□□□ 0.99
LINC00189-201ENST00000420364 ERICH3Q5RHP9 1530 aa21.23■□□□□ 0.99
LINC00189-201ENST00000420364 FBLN2P98095 1184 aa21.21■□□□□ 0.99
LINC00189-201ENST00000420364 SYNJ2O15056 1496 aa21.2■□□□□ 0.98
LINC00189-201ENST00000420364 PBRM1Q86U86 1689 aa21.18■□□□□ 0.98
LINC00189-201ENST00000420364 FHAD1B1AJZ9 1412 aa21.15■□□□□ 0.98
LINC00189-201ENST00000420364 IGF1RP08069 1367 aa21.1■□□□□ 0.97
LINC00189-201ENST00000420364 ADAMTS12P58397 1594 aa21.07■□□□□ 0.96
LINC00189-201ENST00000420364 CHD1O14646 1710 aa21.05■□□□□ 0.96
LINC00189-201ENST00000420364 MSH5O43196 834 aa21.05■□□□□ 0.96
LINC00189-201ENST00000420364 GRIN2AQ12879 1464 aa21.04■□□□□ 0.96
LINC00189-201ENST00000420364 CUL7Q14999 1698 aa21.03■□□□□ 0.96
LINC00189-201ENST00000420364 EEA1Q15075 1411 aa21.02■□□□□ 0.96
LINC00189-201ENST00000420364 CARMIL1Q5VZK9 1371 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms