RNA–Protein interactions for RNA: ENST00000420070.1

LINC00261-201, long intergenic non-protein coding RNA 261, humanhuman

TSL 3

Gene LINC00261, Length 795 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00261-201ENST00000420070 AEBP2Q6ZN18 517 aaPredicted RBP23.97■■□□□ 1.43
LINC00261-201ENST00000420070 NISCHQ9Y2I1 1504 aa22.67■■□□□ 1.22
LINC00261-201ENST00000420070 CHIC1Q5VXU3 224 aa22.61■■□□□ 1.21
LINC00261-201ENST00000420070 ABCC9O60706 1549 aa21.35■■□□□ 1.01
LINC00261-201ENST00000420070 DNAJC5BQ9UF47 199 aa20.75■□□□□ 0.91
LINC00261-201ENST00000420070 CCDC180Q9P1Z9 1646 aa20.56■□□□□ 0.88
LINC00261-201ENST00000420070 SENP3Q9H4L4 574 aaPredicted RBP20.48■□□□□ 0.87
LINC00261-201ENST00000420070 PHF23Q9BUL5 403 aaPredicted RBP20.2■□□□□ 0.82
LINC00261-201ENST00000420070 RB1CC1Q8TDY2 1594 aa19.97■□□□□ 0.79
LINC00261-201ENST00000420070 PABPN1Q86U42 306 aaKnown RBP eCLIP19.83■□□□□ 0.77
LINC00261-201ENST00000420070 NACADO15069 1562 aa19.66■□□□□ 0.74
LINC00261-201ENST00000420070 DNAJC5Q9H3Z4 198 aa19.57■□□□□ 0.72
LINC00261-201ENST00000420070 DCAF8L2P0C7V8 631 aa19.55■□□□□ 0.72
LINC00261-201ENST00000420070 UNC13AQ9UPW8 1703 aa19.46■□□□□ 0.71
LINC00261-201ENST00000420070 BICRAQ9NZM4 1560 aa19.43■□□□□ 0.7
LINC00261-201ENST00000420070 CECR2Q9BXF3 1484 aa19.3■□□□□ 0.68
LINC00261-201ENST00000420070 CC2D2AQ9P2K1 1620 aa19.22■□□□□ 0.67
LINC00261-201ENST00000420070 MYO15BQ96JP2 1530 aa19.16■□□□□ 0.66
LINC00261-201ENST00000420070 FOXD1Q16676 465 aa19.12■□□□□ 0.65
LINC00261-201ENST00000420070 SHROOM4Q9ULL8 1493 aa19.05■□□□□ 0.64
LINC00261-201ENST00000420070 EIF4G1Q04637 1599 aaKnown RBP19■□□□□ 0.63
LINC00261-201ENST00000420070 SCRIBQ14160 1630 aa18.73■□□□□ 0.59
LINC00261-201ENST00000420070 CUX2O14529 1486 aa18.67■□□□□ 0.58
LINC00261-201ENST00000420070 DCAF1Q9Y4B6 1507 aa18.65■□□□□ 0.58
LINC00261-201ENST00000420070 ZCCHC6Q5VYS8 1495 aaKnown RBP18.59■□□□□ 0.57
LINC00261-201ENST00000420070 ERCC6Q03468 1493 aa18.47■□□□□ 0.55
LINC00261-201ENST00000420070 TRIM41Q8WV44 630 aa18.4■□□□□ 0.54
LINC00261-201ENST00000420070 NCAPD3P42695 1498 aa18.21■□□□□ 0.51
LINC00261-201ENST00000420070 NESP48681 1621 aa18.14■□□□□ 0.49
LINC00261-201ENST00000420070 ATAD2BQ9ULI0 1458 aa18.04■□□□□ 0.48
LINC00261-201ENST00000420070 THOC2Q8NI27 1593 aaKnown RBP18.03■□□□□ 0.48
LINC00261-201ENST00000420070 PLPPR3Q6T4P5 718 aa17.99■□□□□ 0.47
LINC00261-201ENST00000420070 MSH5O43196 834 aa17.97■□□□□ 0.47
LINC00261-201ENST00000420070 HMGXB3Q12766 1538 aa17.94■□□□□ 0.46
LINC00261-201ENST00000420070 SMARCA2P51531 1590 aa17.91■□□□□ 0.46
LINC00261-201ENST00000420070 LAMC3Q9Y6N6 1575 aa17.86■□□□□ 0.45
LINC00261-201ENST00000420070 PDS5BQ9NTI5 1447 aa17.83■□□□□ 0.45
LINC00261-201ENST00000420070 POTEDQ86YR6 584 aa17.82■□□□□ 0.44
LINC00261-201ENST00000420070 KIF21AQ7Z4S6 1674 aa17.81■□□□□ 0.44
LINC00261-201ENST00000420070 BAZ1BQ9UIG0 1483 aaKnown RBP17.81■□□□□ 0.44
LINC00261-201ENST00000420070 PIAS4Q8N2W9 510 aaPredicted RBP17.8■□□□□ 0.44
LINC00261-201ENST00000420070 SMARCA4P51532 1647 aa17.8■□□□□ 0.44
LINC00261-201ENST00000420070 OSCARQ8IYS5 282 aa17.79■□□□□ 0.44
LINC00261-201ENST00000420070 PPP6R1Q9UPN7 881 aa17.74■□□□□ 0.43
LINC00261-201ENST00000420070 BAZ1AQ9NRL2 1556 aaPredicted RBP17.71■□□□□ 0.43
LINC00261-201ENST00000420070 MRC2Q9UBG0 1479 aa17.69■□□□□ 0.42
LINC00261-201ENST00000420070 ADRA2BP18089 450 aa17.66■□□□□ 0.42
LINC00261-201ENST00000420070 WDR62O43379 1518 aa17.64■□□□□ 0.41
LINC00261-201ENST00000420070 CADPSQ9ULU8 1353 aa17.64■□□□□ 0.41
LINC00261-201ENST00000420070 PEG3Q9GZU2 1588 aa17.63■□□□□ 0.41
LINC00261-201ENST00000420070 RIMBP3CA6NJZ7 1639 aa17.54■□□□□ 0.4
LINC00261-201ENST00000420070 RIMBP3BA6NNM3 1639 aa17.54■□□□□ 0.4
LINC00261-201ENST00000420070 RIMBP3Q9UFD9 1639 aa17.54■□□□□ 0.4
LINC00261-201ENST00000420070 CEP164Q9UPV0 1460 aa17.47■□□□□ 0.39
LINC00261-201ENST00000420070 MROH2BQ7Z745 1585 aa17.46■□□□□ 0.39
LINC00261-201ENST00000420070 TRHP20396 242 aaPredicted RBP17.46■□□□□ 0.39
LINC00261-201ENST00000420070 CYB5RLQ6IPT4 315 aa17.43■□□□□ 0.38
LINC00261-201ENST00000420070 ARHGEF11O15085 1522 aa17.42■□□□□ 0.38
LINC00261-201ENST00000420070 FANCD2Q9BXW9 1451 aa17.41■□□□□ 0.38
LINC00261-201ENST00000420070 URB2Q14146 1524 aaKnown RBP17.31■□□□□ 0.36
LINC00261-201ENST00000420070 CFTRP13569 1480 aa17.26■□□□□ 0.35
LINC00261-201ENST00000420070 ZNF608Q9ULD9 1512 aaPredicted RBP17.21■□□□□ 0.35
LINC00261-201ENST00000420070 ARAP1Q96P48 1450 aa17.2■□□□□ 0.34
LINC00261-201ENST00000420070 WIZO95785 1651 aa17.2■□□□□ 0.34
LINC00261-201ENST00000420070 IFT140Q96RY7 1462 aa17.16■□□□□ 0.34
LINC00261-201ENST00000420070 RSF1Q96T23 1441 aaPredicted RBP17.08■□□□□ 0.32
LINC00261-201ENST00000420070 FBLN2P98095 1184 aa17.07■□□□□ 0.32
LINC00261-201ENST00000420070 EIF4G3O43432 1585 aaKnown RBP17.02■□□□□ 0.32
LINC00261-201ENST00000420070 CHD1O14646 1710 aa17.01■□□□□ 0.31
LINC00261-201ENST00000420070 AQRO60306 1485 aaKnown RBP eCLIP17■□□□□ 0.31
LINC00261-201ENST00000420070 TOPBP1Q92547 1522 aa16.99■□□□□ 0.31
LINC00261-201ENST00000420070 ABCC8Q09428 1581 aa16.91■□□□□ 0.3
LINC00261-201ENST00000420070 TOP2AP11388 1531 aaKnown RBP16.91■□□□□ 0.3
LINC00261-201ENST00000420070 PRDM2Q13029 1718 aa16.9■□□□□ 0.3
LINC00261-201ENST00000420070 TARBP1Q13395 1621 aaKnown RBP16.88■□□□□ 0.29
LINC00261-201ENST00000420070 CLASP1Q7Z460 1538 aa16.84■□□□□ 0.29
LINC00261-201ENST00000420070 DNMBPQ6XZF7 1577 aa16.83■□□□□ 0.28
LINC00261-201ENST00000420070 ILDR1Q86SU0 546 aaPredicted RBP16.83■□□□□ 0.28
LINC00261-201ENST00000420070 CHMP7Q8WUX9 453 aaPredicted RBP16.82■□□□□ 0.28
LINC00261-201ENST00000420070 TDRD9Q8NDG6 1382 aaKnown RBP16.79■□□□□ 0.28
LINC00261-201ENST00000420070 CCDC88BA6NC98 1476 aa16.79■□□□□ 0.28
LINC00261-201ENST00000420070 POLA1P09884 1462 aaPredicted RBP16.77■□□□□ 0.28
LINC00261-201ENST00000420070 GAPVD1Q14C86 1478 aa16.76■□□□□ 0.27
LINC00261-201ENST00000420070 SYNJ1O43426 1573 aa16.76■□□□□ 0.27
LINC00261-201ENST00000420070 SNAPC4Q5SXM2 1469 aa16.75■□□□□ 0.27
LINC00261-201ENST00000420070 RAD54L2Q9Y4B4 1467 aa16.75■□□□□ 0.27
LINC00261-201ENST00000420070 SOGA1O94964 1423 aa16.73■□□□□ 0.27
LINC00261-201ENST00000420070 MAGI1Q96QZ7 1491 aaPredicted RBP16.67■□□□□ 0.26
LINC00261-201ENST00000420070 SYNJ2O15056 1496 aa16.65■□□□□ 0.26
LINC00261-201ENST00000420070 GRIN2BQ13224 1484 aa16.62■□□□□ 0.25
LINC00261-201ENST00000420070 WDR97A6NE52 1622 aa16.62■□□□□ 0.25
LINC00261-201ENST00000420070 KDM4FA0A1W2PPD8 638 aa16.6■□□□□ 0.25
LINC00261-201ENST00000420070 ERCC6L2Q5T890 1561 aa16.55■□□□□ 0.24
LINC00261-201ENST00000420070 FGD5Q6ZNL6 1462 aa16.55■□□□□ 0.24
LINC00261-201ENST00000420070 KIF13AQ9H1H9 1805 aa16.52■□□□□ 0.23
LINC00261-201ENST00000420070 FAM69CQ0P6D2 419 aa16.48■□□□□ 0.23
LINC00261-201ENST00000420070 CEP170Q5SW79 1584 aa16.44■□□□□ 0.22
LINC00261-201ENST00000420070 CUX1P39880 1505 aa16.44■□□□□ 0.22
LINC00261-201ENST00000420070 PBRM1Q86U86 1689 aa16.43■□□□□ 0.22
LINC00261-201ENST00000420070 GRIN2AQ12879 1464 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms