RNA–Protein interactions for RNA: ENST00000419841.2

C7orf43-204, Transcript of chromosome 7 open reading frame 43, humanhuman

TSL 2

Gene C7orf43, Length 1,500 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C7orf43-204ENST00000419841 NISCHQ9Y2I1 1504 aa35.45■■■■□ 3.26
C7orf43-204ENST00000419841 CCDC180Q9P1Z9 1646 aa31.02■■■□□ 2.56
C7orf43-204ENST00000419841 ZCCHC6Q5VYS8 1495 aaKnown RBP29.73■■■□□ 2.35
C7orf43-204ENST00000419841 ABCC9O60706 1549 aa29.46■■■□□ 2.31
C7orf43-204ENST00000419841 DCAF1Q9Y4B6 1507 aa29.34■■■□□ 2.29
C7orf43-204ENST00000419841 DCAF8L2P0C7V8 631 aa29.3■■■□□ 2.28
C7orf43-204ENST00000419841 MYO15BQ96JP2 1530 aa29.09■■■□□ 2.25
C7orf43-204ENST00000419841 NACADO15069 1562 aa28.95■■■□□ 2.23
C7orf43-204ENST00000419841 RB1CC1Q8TDY2 1594 aa28.74■■■□□ 2.19
C7orf43-204ENST00000419841 SHROOM4Q9ULL8 1493 aa28.71■■■□□ 2.19
C7orf43-204ENST00000419841 SCRIBQ14160 1630 aa28.44■■■□□ 2.14
C7orf43-204ENST00000419841 UNC13AQ9UPW8 1703 aa28.1■■■□□ 2.09
C7orf43-204ENST00000419841 BICRAQ9NZM4 1560 aa27.84■■■□□ 2.05
C7orf43-204ENST00000419841 PABPN1Q86U42 306 aaKnown RBP eCLIP27.74■■■□□ 2.03
C7orf43-204ENST00000419841 SUPT5HO00267 1087 aaKnown RBP27.58■■■□□ 2.01
C7orf43-204ENST00000419841 CECR2Q9BXF3 1484 aa27.53■■■□□ 2
C7orf43-204ENST00000419841 RSF1Q96T23 1441 aaPredicted RBP27.42■■□□□ 1.98
C7orf43-204ENST00000419841 BAZ1AQ9NRL2 1556 aaPredicted RBP27.4■■□□□ 1.98
C7orf43-204ENST00000419841 MROH2BQ7Z745 1585 aa27.35■■□□□ 1.97
C7orf43-204ENST00000419841 SMARCA4P51532 1647 aa27.28■■□□□ 1.96
C7orf43-204ENST00000419841 WIZO95785 1651 aa27.11■■□□□ 1.93
C7orf43-204ENST00000419841 EIF4G1Q04637 1599 aaKnown RBP27.03■■□□□ 1.92
C7orf43-204ENST00000419841 PEG3Q9GZU2 1588 aa26.98■■□□□ 1.91
C7orf43-204ENST00000419841 ATAD2BQ9ULI0 1458 aa26.9■■□□□ 1.9
C7orf43-204ENST00000419841 SMARCA2P51531 1590 aa26.9■■□□□ 1.9
C7orf43-204ENST00000419841 TOP2AP11388 1531 aaKnown RBP26.86■■□□□ 1.89
C7orf43-204ENST00000419841 BAZ1BQ9UIG0 1483 aaKnown RBP26.73■■□□□ 1.87
C7orf43-204ENST00000419841 NCAPD3P42695 1498 aa26.72■■□□□ 1.87
C7orf43-204ENST00000419841 CC2D2AQ9P2K1 1620 aa26.67■■□□□ 1.86
C7orf43-204ENST00000419841 HMGXB3Q12766 1538 aa26.66■■□□□ 1.86
C7orf43-204ENST00000419841 CCDC88BA6NC98 1476 aa26.57■■□□□ 1.84
C7orf43-204ENST00000419841 CHIC1Q5VXU3 224 aa26.47■■□□□ 1.83
C7orf43-204ENST00000419841 DNAJC5BQ9UF47 199 aa26.14■■□□□ 1.78
C7orf43-204ENST00000419841 CFTRP13569 1480 aa26.06■■□□□ 1.76
C7orf43-204ENST00000419841 CADPSQ9ULU8 1353 aa26.02■■□□□ 1.76
C7orf43-204ENST00000419841 TRIM41Q8WV44 630 aa25.96■■□□□ 1.75
C7orf43-204ENST00000419841 ABCC8Q09428 1581 aa25.91■■□□□ 1.74
C7orf43-204ENST00000419841 PRDM2Q13029 1718 aa25.9■■□□□ 1.74
C7orf43-204ENST00000419841 LAMC3Q9Y6N6 1575 aa25.83■■□□□ 1.73
C7orf43-204ENST00000419841 WRNQ14191 1432 aaPredicted RBP eCLIP25.82■■□□□ 1.72
C7orf43-204ENST00000419841 NESP48681 1621 aa25.79■■□□□ 1.72
C7orf43-204ENST00000419841 FANCD2Q9BXW9 1451 aa25.71■■□□□ 1.71
C7orf43-204ENST00000419841 SYNJ1O43426 1573 aa25.69■■□□□ 1.7
C7orf43-204ENST00000419841 PDS5BQ9NTI5 1447 aa25.65■■□□□ 1.7
C7orf43-204ENST00000419841 TOP2BQ02880 1626 aa25.63■■□□□ 1.69
C7orf43-204ENST00000419841 BIVM-ERCC5R4GMW8 1640 aa25.6■■□□□ 1.69
C7orf43-204ENST00000419841 CUX1P39880 1505 aa25.59■■□□□ 1.69
C7orf43-204ENST00000419841 CEP164Q9UPV0 1460 aa25.58■■□□□ 1.68
C7orf43-204ENST00000419841 KIF21AQ7Z4S6 1674 aa25.49■■□□□ 1.67
C7orf43-204ENST00000419841 LOC105371045A0A1W2PR82 267 aa25.46■■□□□ 1.67
C7orf43-204ENST00000419841 DNMBPQ6XZF7 1577 aa25.45■■□□□ 1.66
C7orf43-204ENST00000419841 FAM9AQ8IZU1 332 aaPredicted RBP25.44■■□□□ 1.66
C7orf43-204ENST00000419841 TOPBP1Q92547 1522 aa25.41■■□□□ 1.66
C7orf43-204ENST00000419841 SOGA1O94964 1423 aa25.4■■□□□ 1.66
C7orf43-204ENST00000419841 EEA1Q15075 1411 aa25.38■■□□□ 1.65
C7orf43-204ENST00000419841 URB2Q14146 1524 aaKnown RBP25.38■■□□□ 1.65
C7orf43-204ENST00000419841 FGD5Q6ZNL6 1462 aa25.35■■□□□ 1.65
C7orf43-204ENST00000419841 MRC2Q9UBG0 1479 aa25.32■■□□□ 1.64
C7orf43-204ENST00000419841 ERCC6Q03468 1493 aa25.31■■□□□ 1.64
C7orf43-204ENST00000419841 RUSC2Q8N2Y8 1516 aa25.3■■□□□ 1.64
C7orf43-204ENST00000419841 POLA1P09884 1462 aaPredicted RBP25.27■■□□□ 1.64
C7orf43-204ENST00000419841 CSRNP3Q8WYN3 585 aa25.24■■□□□ 1.63
C7orf43-204ENST00000419841 KIF27Q86VH2 1401 aa25.2■■□□□ 1.62
C7orf43-204ENST00000419841 WDR62O43379 1518 aa25.19■■□□□ 1.62
C7orf43-204ENST00000419841 RAD54L2Q9Y4B4 1467 aa25.16■■□□□ 1.62
C7orf43-204ENST00000419841 CUX2O14529 1486 aa25.16■■□□□ 1.62
C7orf43-204ENST00000419841 ABCA10Q8WWZ4 1543 aa25.15■■□□□ 1.62
C7orf43-204ENST00000419841 THOC2Q8NI27 1593 aaKnown RBP25.14■■□□□ 1.61
C7orf43-204ENST00000419841 EHMT2Q96KQ7 1210 aa25.07■■□□□ 1.6
C7orf43-204ENST00000419841 WDR97A6NE52 1622 aa25.05■■□□□ 1.6
C7orf43-204ENST00000419841 KIF21BO75037 1637 aa25.03■■□□□ 1.6
C7orf43-204ENST00000419841 TARBP1Q13395 1621 aaKnown RBP25.03■■□□□ 1.6
C7orf43-204ENST00000419841 GOLGA3Q08378 1498 aa25■■□□□ 1.59
C7orf43-204ENST00000419841 IFT140Q96RY7 1462 aa24.99■■□□□ 1.59
C7orf43-204ENST00000419841 IGF1RP08069 1367 aa24.99■■□□□ 1.59
C7orf43-204ENST00000419841 PRXQ9BXM0 1461 aa24.97■■□□□ 1.59
C7orf43-204ENST00000419841 TDRD9Q8NDG6 1382 aaKnown RBP24.95■■□□□ 1.58
C7orf43-204ENST00000419841 ABCA5Q8WWZ7 1642 aa24.94■■□□□ 1.58
C7orf43-204ENST00000419841 ERICH3Q5RHP9 1530 aa24.91■■□□□ 1.58
C7orf43-204ENST00000419841 GAPVD1Q14C86 1478 aa24.91■■□□□ 1.58
C7orf43-204ENST00000419841 RAPGEF2Q9Y4G8 1499 aa24.9■■□□□ 1.58
C7orf43-204ENST00000419841 TNIKQ9UKE5 1360 aa24.89■■□□□ 1.57
C7orf43-204ENST00000419841 UBTFP17480 764 aaKnown RBP24.88■■□□□ 1.57
C7orf43-204ENST00000419841 CARMIL1Q5VZK9 1371 aa24.86■■□□□ 1.57
C7orf43-204ENST00000419841 CUL7Q14999 1698 aa24.82■■□□□ 1.56
C7orf43-204ENST00000419841 AQRO60306 1485 aaKnown RBP eCLIP24.82■■□□□ 1.567e-8■■■■□ 23.2
C7orf43-204ENST00000419841 ZNF608Q9ULD9 1512 aaPredicted RBP24.81■■□□□ 1.56
C7orf43-204ENST00000419841 PBRM1Q86U86 1689 aa24.76■■□□□ 1.55
C7orf43-204ENST00000419841 GRIN2BQ13224 1484 aa24.76■■□□□ 1.55
C7orf43-204ENST00000419841 CEP162Q5TB80 1403 aa24.75■■□□□ 1.55
C7orf43-204ENST00000419841 EIF4G3O43432 1585 aaKnown RBP24.73■■□□□ 1.55
C7orf43-204ENST00000419841 FHAD1B1AJZ9 1412 aa24.66■■□□□ 1.54
C7orf43-204ENST00000419841 ADAMTS12P58397 1594 aa24.63■■□□□ 1.53
C7orf43-204ENST00000419841 SNAPC4Q5SXM2 1469 aa24.59■■□□□ 1.53
C7orf43-204ENST00000419841 CLIP1P30622 1438 aa24.58■■□□□ 1.53
C7orf43-204ENST00000419841 MAGI1Q96QZ7 1491 aaPredicted RBP24.58■■□□□ 1.53
C7orf43-204ENST00000419841 CTTNBP2Q8WZ74 1663 aa24.49■■□□□ 1.51
C7orf43-204ENST00000419841 RANGAP1P46060 587 aaPredicted RBP24.48■■□□□ 1.51
C7orf43-204ENST00000419841 SYNJ2O15056 1496 aa24.48■■□□□ 1.51
C7orf43-204ENST00000419841 GRIN2AQ12879 1464 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms