RNA–Protein interactions for RNA: ENST00000419499.1

LINC00402-201, long intergenic non-protein coding RNA 402, humanhuman

TSL 2 BASIC

Gene LINC00402, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00402-201ENST00000419499 NISCHQ9Y2I1 1504 aa21.97■■□□□ 1.11
LINC00402-201ENST00000419499 CCDC180Q9P1Z9 1646 aa19.15■□□□□ 0.66
LINC00402-201ENST00000419499 ZCCHC6Q5VYS8 1495 aaKnown RBP18.59■□□□□ 0.57
LINC00402-201ENST00000419499 DCAF1Q9Y4B6 1507 aa18.25■□□□□ 0.51
LINC00402-201ENST00000419499 MYO15BQ96JP2 1530 aa17.93■□□□□ 0.46
LINC00402-201ENST00000419499 SHROOM4Q9ULL8 1493 aa17.89■□□□□ 0.45
LINC00402-201ENST00000419499 NACADO15069 1562 aa17.65■□□□□ 0.42
LINC00402-201ENST00000419499 DCAF8L2P0C7V8 631 aa17.58■□□□□ 0.41
LINC00402-201ENST00000419499 ABCC9O60706 1549 aa17.58■□□□□ 0.41
LINC00402-201ENST00000419499 SCRIBQ14160 1630 aa17.52■□□□□ 0.4
LINC00402-201ENST00000419499 RB1CC1Q8TDY2 1594 aa17.4■□□□□ 0.38
LINC00402-201ENST00000419499 UNC13AQ9UPW8 1703 aa17.29■□□□□ 0.36
LINC00402-201ENST00000419499 SUPT5HO00267 1087 aaKnown RBP17.25■□□□□ 0.35
LINC00402-201ENST00000419499 RSF1Q96T23 1441 aaPredicted RBP17.11■□□□□ 0.33
LINC00402-201ENST00000419499 CECR2Q9BXF3 1484 aa17.02■□□□□ 0.31
LINC00402-201ENST00000419499 BICRAQ9NZM4 1560 aa17■□□□□ 0.31
LINC00402-201ENST00000419499 MROH2BQ7Z745 1585 aa16.99■□□□□ 0.31
LINC00402-201ENST00000419499 BAZ1AQ9NRL2 1556 aaPredicted RBP16.93■□□□□ 0.3
LINC00402-201ENST00000419499 WIZO95785 1651 aa16.9■□□□□ 0.3
LINC00402-201ENST00000419499 SMARCA4P51532 1647 aa16.88■□□□□ 0.29
LINC00402-201ENST00000419499 CHIC1Q5VXU3 224 aa16.81■□□□□ 0.28
LINC00402-201ENST00000419499 EIF4G1Q04637 1599 aaKnown RBP16.76■□□□□ 0.27
LINC00402-201ENST00000419499 PEG3Q9GZU2 1588 aa16.74■□□□□ 0.27
LINC00402-201ENST00000419499 TOP2AP11388 1531 aaKnown RBP16.73■□□□□ 0.27
LINC00402-201ENST00000419499 SMARCA2P51531 1590 aa16.6■□□□□ 0.25
LINC00402-201ENST00000419499 PABPN1Q86U42 306 aaKnown RBP eCLIP16.52■□□□□ 0.24
LINC00402-201ENST00000419499 CCDC88BA6NC98 1476 aa16.49■□□□□ 0.23
LINC00402-201ENST00000419499 ATAD2BQ9ULI0 1458 aa16.44■□□□□ 0.22
LINC00402-201ENST00000419499 HMGXB3Q12766 1538 aa16.34■□□□□ 0.21
LINC00402-201ENST00000419499 BAZ1BQ9UIG0 1483 aaKnown RBP16.32■□□□□ 0.2
LINC00402-201ENST00000419499 ABCC8Q09428 1581 aa16.27■□□□□ 0.19
LINC00402-201ENST00000419499 NCAPD3P42695 1498 aa16.25■□□□□ 0.19
LINC00402-201ENST00000419499 TRIM41Q8WV44 630 aa16.22■□□□□ 0.19
LINC00402-201ENST00000419499 PRDM2Q13029 1718 aa16.14■□□□□ 0.17
LINC00402-201ENST00000419499 SYNJ1O43426 1573 aa16.11■□□□□ 0.17
LINC00402-201ENST00000419499 LOC105371045A0A1W2PR82 267 aa16.11■□□□□ 0.17
LINC00402-201ENST00000419499 BIVM-ERCC5R4GMW8 1640 aa16.06■□□□□ 0.16
LINC00402-201ENST00000419499 CC2D2AQ9P2K1 1620 aa16.06■□□□□ 0.16
LINC00402-201ENST00000419499 WRNQ14191 1432 aaPredicted RBP eCLIP16.04■□□□□ 0.16
LINC00402-201ENST00000419499 TOP2BQ02880 1626 aa16.02■□□□□ 0.16
LINC00402-201ENST00000419499 CFTRP13569 1480 aa15.99■□□□□ 0.15
LINC00402-201ENST00000419499 EEA1Q15075 1411 aa15.97■□□□□ 0.15
LINC00402-201ENST00000419499 SOGA1O94964 1423 aa15.96■□□□□ 0.15
LINC00402-201ENST00000419499 RUSC2Q8N2Y8 1516 aa15.91■□□□□ 0.14
LINC00402-201ENST00000419499 KIF21BO75037 1637 aa15.89■□□□□ 0.14
LINC00402-201ENST00000419499 CUX1P39880 1505 aa15.88■□□□□ 0.13
LINC00402-201ENST00000419499 FAM9AQ8IZU1 332 aaPredicted RBP15.87■□□□□ 0.13
LINC00402-201ENST00000419499 CADPSQ9ULU8 1353 aa15.77■□□□□ 0.12
LINC00402-201ENST00000419499 GOLGA3Q08378 1498 aa15.77■□□□□ 0.11
LINC00402-201ENST00000419499 TNIKQ9UKE5 1360 aa15.76■□□□□ 0.11
LINC00402-201ENST00000419499 CEP164Q9UPV0 1460 aa15.74■□□□□ 0.11
LINC00402-201ENST00000419499 CSRNP3Q8WYN3 585 aa15.71■□□□□ 0.11
LINC00402-201ENST00000419499 CEP162Q5TB80 1403 aa15.71■□□□□ 0.11
LINC00402-201ENST00000419499 ERICH3Q5RHP9 1530 aa15.71■□□□□ 0.1
LINC00402-201ENST00000419499 LAMC3Q9Y6N6 1575 aa15.69■□□□□ 0.1
LINC00402-201ENST00000419499 PRXQ9BXM0 1461 aa15.67■□□□□ 0.1
LINC00402-201ENST00000419499 RAPGEF2Q9Y4G8 1499 aa15.65■□□□□ 0.1
LINC00402-201ENST00000419499 DNMBPQ6XZF7 1577 aa15.64■□□□□ 0.09
LINC00402-201ENST00000419499 FANCD2Q9BXW9 1451 aa15.64■□□□□ 0.09
LINC00402-201ENST00000419499 PCGF6Q9BYE7 350 aa15.62■□□□□ 0.09
LINC00402-201ENST00000419499 WDR97A6NE52 1622 aa15.62■□□□□ 0.09
LINC00402-201ENST00000419499 NESP48681 1621 aa15.61■□□□□ 0.09
LINC00402-201ENST00000419499 TRIM26Q12899 539 aaPredicted RBP15.6■□□□□ 0.09
LINC00402-201ENST00000419499 FGD5Q6ZNL6 1462 aa15.6■□□□□ 0.09
LINC00402-201ENST00000419499 EHMT2Q96KQ7 1210 aa15.59■□□□□ 0.09
LINC00402-201ENST00000419499 KIF27Q86VH2 1401 aa15.57■□□□□ 0.08
LINC00402-201ENST00000419499 KIF21AQ7Z4S6 1674 aa15.56■□□□□ 0.08
LINC00402-201ENST00000419499 TOPBP1Q92547 1522 aa15.55■□□□□ 0.08
LINC00402-201ENST00000419499 HRCP23327 699 aa15.51■□□□□ 0.07
LINC00402-201ENST00000419499 ABCA10Q8WWZ4 1543 aa15.51■□□□□ 0.07
LINC00402-201ENST00000419499 URB2Q14146 1524 aaKnown RBP15.5■□□□□ 0.07
LINC00402-201ENST00000419499 POLA1P09884 1462 aaPredicted RBP15.5■□□□□ 0.07
LINC00402-201ENST00000419499 CUX2O14529 1486 aa15.48■□□□□ 0.07
LINC00402-201ENST00000419499 CLIP1P30622 1438 aa15.47■□□□□ 0.07
LINC00402-201ENST00000419499 ABCA5Q8WWZ7 1642 aa15.46■□□□□ 0.07
LINC00402-201ENST00000419499 DNAJC5BQ9UF47 199 aa15.44■□□□□ 0.06
LINC00402-201ENST00000419499 VPS8Q8N3P4 1428 aa15.44■□□□□ 0.06
LINC00402-201ENST00000419499 CUL7Q14999 1698 aa15.44■□□□□ 0.06
LINC00402-201ENST00000419499 IGF1RP08069 1367 aa15.43■□□□□ 0.06
LINC00402-201ENST00000419499 ARAP1Q96P48 1450 aa15.43■□□□□ 0.06
LINC00402-201ENST00000419499 UBTFP17480 764 aaKnown RBP15.42■□□□□ 0.06
LINC00402-201ENST00000419499 TARBP1Q13395 1621 aaKnown RBP15.41■□□□□ 0.06
LINC00402-201ENST00000419499 PDS5BQ9NTI5 1447 aa15.4■□□□□ 0.06
LINC00402-201ENST00000419499 RAD54L2Q9Y4B4 1467 aa15.4■□□□□ 0.06
LINC00402-201ENST00000419499 CTTNBP2Q8WZ74 1663 aa15.36■□□□□ 0.05
LINC00402-201ENST00000419499 ARHGAP35Q9NRY4 1499 aa15.34■□□□□ 0.05
LINC00402-201ENST00000419499 PBRM1Q86U86 1689 aa15.31■□□□□ 0.04
LINC00402-201ENST00000419499 CARMIL1Q5VZK9 1371 aa15.3■□□□□ 0.04
LINC00402-201ENST00000419499 WDR62O43379 1518 aa15.3■□□□□ 0.04
LINC00402-201ENST00000419499 MRC2Q9UBG0 1479 aa15.28■□□□□ 0.04
LINC00402-201ENST00000419499 THOC2Q8NI27 1593 aaKnown RBP15.25■□□□□ 0.03
LINC00402-201ENST00000419499 PPARGC1BQ86YN6 1023 aaKnown RBP15.25■□□□□ 0.03
LINC00402-201ENST00000419499 EFCAB5A4FU69 1503 aa15.23■□□□□ 0.03
LINC00402-201ENST00000419499 CFAP43Q8NDM7 1665 aa15.22■□□□□ 0.03
LINC00402-201ENST00000419499 GAPVD1Q14C86 1478 aa15.22■□□□□ 0.03
LINC00402-201ENST00000419499 SAMD9Q5K651 1589 aa15.21■□□□□ 0.03
LINC00402-201ENST00000419499 MAP3K1Q13233 1512 aa15.21■□□□□ 0.02
LINC00402-201ENST00000419499 ADAMTS12P58397 1594 aa15.2■□□□□ 0.02
LINC00402-201ENST00000419499 PCF11O94913 1555 aaKnown RBP15.17■□□□□ 0.02
LINC00402-201ENST00000419499 TIAM1Q13009 1591 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms