RNA–Protein interactions for RNA: ENST00000419101.3

LINC00608-201, long intergenic non-protein coding RNA 608, humanhuman

TSL 5 BASIC

Gene LINC00608, Length 2,254 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00608-201ENST00000419101 NISCHQ9Y2I1 1504 aa22.88■■□□□ 1.25
LINC00608-201ENST00000419101 CCDC180Q9P1Z9 1646 aa19.69■□□□□ 0.74
LINC00608-201ENST00000419101 ZCCHC6Q5VYS8 1495 aaKnown RBP19.27■□□□□ 0.67
LINC00608-201ENST00000419101 SHROOM4Q9ULL8 1493 aa19.17■□□□□ 0.66
LINC00608-201ENST00000419101 DCAF8L2P0C7V8 631 aa19.03■□□□□ 0.64
LINC00608-201ENST00000419101 DCAF1Q9Y4B6 1507 aa18.78■□□□□ 0.6
LINC00608-201ENST00000419101 SUPT5HO00267 1087 aaKnown RBP18.61■□□□□ 0.57
LINC00608-201ENST00000419101 ABCC9O60706 1549 aa18.51■□□□□ 0.55
LINC00608-201ENST00000419101 MYO15BQ96JP2 1530 aa18.38■□□□□ 0.53
LINC00608-201ENST00000419101 SCRIBQ14160 1630 aa18.35■□□□□ 0.53
LINC00608-201ENST00000419101 NACADO15069 1562 aa18.26■□□□□ 0.51
LINC00608-201ENST00000419101 RB1CC1Q8TDY2 1594 aa18.06■□□□□ 0.48
LINC00608-201ENST00000419101 RSF1Q96T23 1441 aaPredicted RBP17.93■□□□□ 0.46
LINC00608-201ENST00000419101 CHIC1Q5VXU3 224 aa17.92■□□□□ 0.46
LINC00608-201ENST00000419101 CECR2Q9BXF3 1484 aa17.86■□□□□ 0.45
LINC00608-201ENST00000419101 UNC13AQ9UPW8 1703 aa17.85■□□□□ 0.45
LINC00608-201ENST00000419101 MROH2BQ7Z745 1585 aa17.76■□□□□ 0.43
LINC00608-201ENST00000419101 WIZO95785 1651 aa17.68■□□□□ 0.42
LINC00608-201ENST00000419101 BAZ1AQ9NRL2 1556 aaPredicted RBP17.6■□□□□ 0.41
LINC00608-201ENST00000419101 PABPN1Q86U42 306 aaKnown RBP eCLIP17.6■□□□□ 0.41
LINC00608-201ENST00000419101 BICRAQ9NZM4 1560 aa17.58■□□□□ 0.4
LINC00608-201ENST00000419101 SMARCA4P51532 1647 aa17.52■□□□□ 0.4
LINC00608-201ENST00000419101 TOP2AP11388 1531 aaKnown RBP17.38■□□□□ 0.37
LINC00608-201ENST00000419101 TRIM41Q8WV44 630 aa17.37■□□□□ 0.37
LINC00608-201ENST00000419101 LOC105371045A0A1W2PR82 267 aa17.36■□□□□ 0.37
LINC00608-201ENST00000419101 CCDC88BA6NC98 1476 aa17.28■□□□□ 0.36
LINC00608-201ENST00000419101 SMARCA2P51531 1590 aa17.28■□□□□ 0.36
LINC00608-201ENST00000419101 EIF4G1Q04637 1599 aaKnown RBP17.25■□□□□ 0.35
LINC00608-201ENST00000419101 FAM9AQ8IZU1 332 aaPredicted RBP17.21■□□□□ 0.35
LINC00608-201ENST00000419101 PEG3Q9GZU2 1588 aa17.2■□□□□ 0.34
LINC00608-201ENST00000419101 ATAD2BQ9ULI0 1458 aa17.14■□□□□ 0.33
LINC00608-201ENST00000419101 ABCC8Q09428 1581 aa17.12■□□□□ 0.33
LINC00608-201ENST00000419101 BAZ1BQ9UIG0 1483 aaKnown RBP17.08■□□□□ 0.32
LINC00608-201ENST00000419101 EHMT2Q96KQ7 1210 aa17.07■□□□□ 0.32
LINC00608-201ENST00000419101 PCGF6Q9BYE7 350 aa16.94■□□□□ 0.3
LINC00608-201ENST00000419101 NCAPD3P42695 1498 aa16.88■□□□□ 0.29
LINC00608-201ENST00000419101 HMGXB3Q12766 1538 aa16.86■□□□□ 0.29
LINC00608-201ENST00000419101 WRNQ14191 1432 aaPredicted RBP eCLIP16.85■□□□□ 0.29
LINC00608-201ENST00000419101 SOGA1O94964 1423 aa16.85■□□□□ 0.29
LINC00608-201ENST00000419101 SYNJ1O43426 1573 aa16.82■□□□□ 0.28
LINC00608-201ENST00000419101 RUSC2Q8N2Y8 1516 aa16.81■□□□□ 0.28
LINC00608-201ENST00000419101 TRIM26Q12899 539 aaPredicted RBP16.71■□□□□ 0.27
LINC00608-201ENST00000419101 CSRNP3Q8WYN3 585 aa16.71■□□□□ 0.27
LINC00608-201ENST00000419101 CC2D2AQ9P2K1 1620 aa16.7■□□□□ 0.26
LINC00608-201ENST00000419101 EEA1Q15075 1411 aa16.69■□□□□ 0.26
LINC00608-201ENST00000419101 HRCP23327 699 aa16.65■□□□□ 0.26
LINC00608-201ENST00000419101 TOP2BQ02880 1626 aa16.65■□□□□ 0.26
LINC00608-201ENST00000419101 CFTRP13569 1480 aa16.63■□□□□ 0.25
LINC00608-201ENST00000419101 BIVM-ERCC5R4GMW8 1640 aa16.62■□□□□ 0.25
LINC00608-201ENST00000419101 UBTFP17480 764 aaKnown RBP16.61■□□□□ 0.25
LINC00608-201ENST00000419101 PPARGC1BQ86YN6 1023 aaKnown RBP16.61■□□□□ 0.25
LINC00608-201ENST00000419101 TNIKQ9UKE5 1360 aa16.58■□□□□ 0.25
LINC00608-201ENST00000419101 CEP162Q5TB80 1403 aa16.58■□□□□ 0.24
LINC00608-201ENST00000419101 PRDM2Q13029 1718 aa16.57■□□□□ 0.24
LINC00608-201ENST00000419101 GOLGA3Q08378 1498 aa16.57■□□□□ 0.24
LINC00608-201ENST00000419101 CUX1P39880 1505 aa16.56■□□□□ 0.24
LINC00608-201ENST00000419101 KIF21BO75037 1637 aa16.53■□□□□ 0.24
LINC00608-201ENST00000419101 CADPSQ9ULU8 1353 aa16.52■□□□□ 0.23
LINC00608-201ENST00000419101 CEP164Q9UPV0 1460 aa16.51■□□□□ 0.23
LINC00608-201ENST00000419101 RAPGEF2Q9Y4G8 1499 aa16.46■□□□□ 0.23
LINC00608-201ENST00000419101 TTBK1Q5TCY1 1321 aaPredicted RBP16.41■□□□□ 0.22
LINC00608-201ENST00000419101 NESP48681 1621 aa16.38■□□□□ 0.21
LINC00608-201ENST00000419101 RANGAP1P46060 587 aaPredicted RBP16.38■□□□□ 0.21
LINC00608-201ENST00000419101 KIF27Q86VH2 1401 aa16.37■□□□□ 0.21
LINC00608-201ENST00000419101 FANCD2Q9BXW9 1451 aa16.36■□□□□ 0.21
LINC00608-201ENST00000419101 CLIP1P30622 1438 aa16.36■□□□□ 0.21
LINC00608-201ENST00000419101 DNAJC5BQ9UF47 199 aa16.35■□□□□ 0.21
LINC00608-201ENST00000419101 PRXQ9BXM0 1461 aa16.35■□□□□ 0.21
LINC00608-201ENST00000419101 FGD5Q6ZNL6 1462 aa16.33■□□□□ 0.2
LINC00608-201ENST00000419101 ERICH3Q5RHP9 1530 aa16.32■□□□□ 0.2
LINC00608-201ENST00000419101 CUX2O14529 1486 aa16.3■□□□□ 0.2
LINC00608-201ENST00000419101 DNMBPQ6XZF7 1577 aa16.24■□□□□ 0.19
LINC00608-201ENST00000419101 LAMC3Q9Y6N6 1575 aa16.24■□□□□ 0.19
LINC00608-201ENST00000419101 VPS8Q8N3P4 1428 aa16.24■□□□□ 0.19
LINC00608-201ENST00000419101 TOPBP1Q92547 1522 aa16.23■□□□□ 0.19
LINC00608-201ENST00000419101 IGF1RP08069 1367 aa16.22■□□□□ 0.19
LINC00608-201ENST00000419101 RAD54L2Q9Y4B4 1467 aa16.21■□□□□ 0.19
LINC00608-201ENST00000419101 POLA1P09884 1462 aaPredicted RBP16.18■□□□□ 0.18
LINC00608-201ENST00000419101 ARAP1Q96P48 1450 aa16.16■□□□□ 0.18
LINC00608-201ENST00000419101 URB2Q14146 1524 aaKnown RBP16.16■□□□□ 0.18
LINC00608-201ENST00000419101 CARMIL1Q5VZK9 1371 aa16.15■□□□□ 0.18
LINC00608-201ENST00000419101 KIF21AQ7Z4S6 1674 aa16.15■□□□□ 0.18
LINC00608-201ENST00000419101 ZEB1P37275 1124 aaPredicted RBP16.15■□□□□ 0.18
LINC00608-201ENST00000419101 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.14■□□□□ 0.17
LINC00608-201ENST00000419101 APLP2Q06481 763 aa16.14■□□□□ 0.17
LINC00608-201ENST00000419101 ABCA10Q8WWZ4 1543 aa16.12■□□□□ 0.17
LINC00608-201ENST00000419101 PDS5BQ9NTI5 1447 aa16.12■□□□□ 0.17
LINC00608-201ENST00000419101 ARHGAP35Q9NRY4 1499 aa16.08■□□□□ 0.17
LINC00608-201ENST00000419101 WDR97A6NE52 1622 aa16.06■□□□□ 0.16
LINC00608-201ENST00000419101 CCER1Q8TC90 406 aaPredicted RBP16.05■□□□□ 0.16
LINC00608-201ENST00000419101 TDRD9Q8NDG6 1382 aaKnown RBP16.02■□□□□ 0.16
LINC00608-201ENST00000419101 KANK4Q5T7N3 995 aaPredicted RBP16.01■□□□□ 0.15
LINC00608-201ENST00000419101 HNRNPUL2Q1KMD3 747 aaKnown RBP16■□□□□ 0.15
LINC00608-201ENST00000419101 CUL7Q14999 1698 aa16■□□□□ 0.15
LINC00608-201ENST00000419101 ABCA5Q8WWZ7 1642 aa15.98■□□□□ 0.15
LINC00608-201ENST00000419101 P3H3Q8IVL6 736 aa15.96■□□□□ 0.15
LINC00608-201ENST00000419101 GAPVD1Q14C86 1478 aa15.95■□□□□ 0.14
LINC00608-201ENST00000419101 TARBP1Q13395 1621 aaKnown RBP15.94■□□□□ 0.14
LINC00608-201ENST00000419101 CTTNBP2Q8WZ74 1663 aa15.94■□□□□ 0.14
LINC00608-201ENST00000419101 MRC2Q9UBG0 1479 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms