RNA–Protein interactions for RNA: ENST00000419021.1

SEC61A2-208, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 5

Gene SEC61A2, Length 778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-208ENST00000419021 NISCHQ9Y2I1 1504 aa24.45■■□□□ 1.5
SEC61A2-208ENST00000419021 CCDC180Q9P1Z9 1646 aa21.69■■□□□ 1.06
SEC61A2-208ENST00000419021 ABCC9O60706 1549 aa20.88■□□□□ 0.93
SEC61A2-208ENST00000419021 ZCCHC6Q5VYS8 1495 aaKnown RBP20.44■□□□□ 0.86
SEC61A2-208ENST00000419021 MYO15BQ96JP2 1530 aa20.29■□□□□ 0.84
SEC61A2-208ENST00000419021 DCAF1Q9Y4B6 1507 aa20.28■□□□□ 0.84
SEC61A2-208ENST00000419021 NACADO15069 1562 aa20.27■□□□□ 0.84
SEC61A2-208ENST00000419021 RB1CC1Q8TDY2 1594 aa20.21■□□□□ 0.83
SEC61A2-208ENST00000419021 DCAF8L2P0C7V8 631 aa20.04■□□□□ 0.8
SEC61A2-208ENST00000419021 UNC13AQ9UPW8 1703 aa19.91■□□□□ 0.78
SEC61A2-208ENST00000419021 SCRIBQ14160 1630 aa19.73■□□□□ 0.75
SEC61A2-208ENST00000419021 BICRAQ9NZM4 1560 aa19.72■□□□□ 0.75
SEC61A2-208ENST00000419021 PABPN1Q86U42 306 aaKnown RBP eCLIP19.49■□□□□ 0.71
SEC61A2-208ENST00000419021 SHROOM4Q9ULL8 1493 aa19.47■□□□□ 0.71
SEC61A2-208ENST00000419021 EIF4G1Q04637 1599 aaKnown RBP19.1■□□□□ 0.65
SEC61A2-208ENST00000419021 DNAJC5BQ9UF47 199 aa19.02■□□□□ 0.64
SEC61A2-208ENST00000419021 CECR2Q9BXF3 1484 aa19.02■□□□□ 0.63
SEC61A2-208ENST00000419021 CC2D2AQ9P2K1 1620 aa18.96■□□□□ 0.63
SEC61A2-208ENST00000419021 SMARCA4P51532 1647 aa18.94■□□□□ 0.62
SEC61A2-208ENST00000419021 BAZ1AQ9NRL2 1556 aaPredicted RBP18.9■□□□□ 0.62
SEC61A2-208ENST00000419021 MROH2BQ7Z745 1585 aa18.85■□□□□ 0.61
SEC61A2-208ENST00000419021 PEG3Q9GZU2 1588 aa18.81■□□□□ 0.6
SEC61A2-208ENST00000419021 ATAD2BQ9ULI0 1458 aa18.75■□□□□ 0.59
SEC61A2-208ENST00000419021 SMARCA2P51531 1590 aa18.72■□□□□ 0.59
SEC61A2-208ENST00000419021 NCAPD3P42695 1498 aa18.71■□□□□ 0.59
SEC61A2-208ENST00000419021 RSF1Q96T23 1441 aaPredicted RBP18.69■□□□□ 0.58
SEC61A2-208ENST00000419021 HMGXB3Q12766 1538 aa18.67■□□□□ 0.58
SEC61A2-208ENST00000419021 WIZO95785 1651 aa18.66■□□□□ 0.58
SEC61A2-208ENST00000419021 BAZ1BQ9UIG0 1483 aaKnown RBP18.55■□□□□ 0.56
SEC61A2-208ENST00000419021 TOP2AP11388 1531 aaKnown RBP18.46■□□□□ 0.55
SEC61A2-208ENST00000419021 CCDC88BA6NC98 1476 aa18.22■□□□□ 0.51
SEC61A2-208ENST00000419021 SUPT5HO00267 1087 aaKnown RBP18.19■□□□□ 0.5
SEC61A2-208ENST00000419021 NESP48681 1621 aa18.19■□□□□ 0.5
SEC61A2-208ENST00000419021 LAMC3Q9Y6N6 1575 aa18.17■□□□□ 0.5
SEC61A2-208ENST00000419021 CADPSQ9ULU8 1353 aa18.13■□□□□ 0.49
SEC61A2-208ENST00000419021 CFTRP13569 1480 aa18.12■□□□□ 0.49
SEC61A2-208ENST00000419021 PRDM2Q13029 1718 aa18.08■□□□□ 0.48
SEC61A2-208ENST00000419021 KIF21AQ7Z4S6 1674 aa18.03■□□□□ 0.48
SEC61A2-208ENST00000419021 PDS5BQ9NTI5 1447 aa17.96■□□□□ 0.47
SEC61A2-208ENST00000419021 THOC2Q8NI27 1593 aaKnown RBP17.94■□□□□ 0.46
SEC61A2-208ENST00000419021 FANCD2Q9BXW9 1451 aa17.93■□□□□ 0.46
SEC61A2-208ENST00000419021 ERCC6Q03468 1493 aa17.9■□□□□ 0.46
SEC61A2-208ENST00000419021 CEP164Q9UPV0 1460 aa17.87■□□□□ 0.45
SEC61A2-208ENST00000419021 MRC2Q9UBG0 1479 aa17.82■□□□□ 0.44
SEC61A2-208ENST00000419021 WDR62O43379 1518 aa17.82■□□□□ 0.44
SEC61A2-208ENST00000419021 URB2Q14146 1524 aaKnown RBP17.79■□□□□ 0.44
SEC61A2-208ENST00000419021 CUX2O14529 1486 aa17.74■□□□□ 0.43
SEC61A2-208ENST00000419021 DNMBPQ6XZF7 1577 aa17.7■□□□□ 0.42
SEC61A2-208ENST00000419021 TOPBP1Q92547 1522 aa17.7■□□□□ 0.42
SEC61A2-208ENST00000419021 CUX1P39880 1505 aa17.67■□□□□ 0.42
SEC61A2-208ENST00000419021 ABCC8Q09428 1581 aa17.65■□□□□ 0.42
SEC61A2-208ENST00000419021 BIVM-ERCC5R4GMW8 1640 aa17.61■□□□□ 0.41
SEC61A2-208ENST00000419021 SYNJ1O43426 1573 aa17.6■□□□□ 0.41
SEC61A2-208ENST00000419021 TOP2BQ02880 1626 aa17.58■□□□□ 0.4
SEC61A2-208ENST00000419021 POLA1P09884 1462 aaPredicted RBP17.56■□□□□ 0.4
SEC61A2-208ENST00000419021 WRNQ14191 1432 aaPredicted RBP eCLIP17.56■□□□□ 0.4
SEC61A2-208ENST00000419021 TARBP1Q13395 1621 aaKnown RBP17.55■□□□□ 0.4
SEC61A2-208ENST00000419021 FGD5Q6ZNL6 1462 aa17.54■□□□□ 0.4
SEC61A2-208ENST00000419021 WDR97A6NE52 1622 aa17.5■□□□□ 0.39
SEC61A2-208ENST00000419021 IFT140Q96RY7 1462 aa17.49■□□□□ 0.39
SEC61A2-208ENST00000419021 RAD54L2Q9Y4B4 1467 aa17.46■□□□□ 0.39
SEC61A2-208ENST00000419021 ZNF608Q9ULD9 1512 aaPredicted RBP17.44■□□□□ 0.38
SEC61A2-208ENST00000419021 SOGA1O94964 1423 aa17.42■□□□□ 0.38
SEC61A2-208ENST00000419021 ABCA10Q8WWZ4 1543 aa17.41■□□□□ 0.38
SEC61A2-208ENST00000419021 EIF4G3O43432 1585 aaKnown RBP17.4■□□□□ 0.38
SEC61A2-208ENST00000419021 ABCA5Q8WWZ7 1642 aa17.36■□□□□ 0.37
SEC61A2-208ENST00000419021 AQRO60306 1485 aaKnown RBP eCLIP17.31■□□□□ 0.36
SEC61A2-208ENST00000419021 TDRD9Q8NDG6 1382 aaKnown RBP17.29■□□□□ 0.36
SEC61A2-208ENST00000419021 PBRM1Q86U86 1689 aa17.28■□□□□ 0.36
SEC61A2-208ENST00000419021 GAPVD1Q14C86 1478 aa17.25■□□□□ 0.35
SEC61A2-208ENST00000419021 GRIN2BQ13224 1484 aa17.22■□□□□ 0.35
SEC61A2-208ENST00000419021 CHIC1Q5VXU3 224 aa17.21■□□□□ 0.35
SEC61A2-208ENST00000419021 ERICH3Q5RHP9 1530 aa17.19■□□□□ 0.34
SEC61A2-208ENST00000419021 SNAPC4Q5SXM2 1469 aa17.18■□□□□ 0.34
SEC61A2-208ENST00000419021 MAGI1Q96QZ7 1491 aaPredicted RBP17.18■□□□□ 0.34
SEC61A2-208ENST00000419021 TRIM41Q8WV44 630 aa17.17■□□□□ 0.34
SEC61A2-208ENST00000419021 ADAMTS12P58397 1594 aa17.16■□□□□ 0.34
SEC61A2-208ENST00000419021 CHD1O14646 1710 aa17.16■□□□□ 0.34
SEC61A2-208ENST00000419021 RUSC2Q8N2Y8 1516 aa17.15■□□□□ 0.34
SEC61A2-208ENST00000419021 KIF27Q86VH2 1401 aa17.14■□□□□ 0.33
SEC61A2-208ENST00000419021 IGF1RP08069 1367 aa17.1■□□□□ 0.33
SEC61A2-208ENST00000419021 SYNJ2O15056 1496 aa17.1■□□□□ 0.33
SEC61A2-208ENST00000419021 CUL7Q14999 1698 aa17.08■□□□□ 0.32
SEC61A2-208ENST00000419021 FHAD1B1AJZ9 1412 aa17.05■□□□□ 0.32
SEC61A2-208ENST00000419021 GRIN2AQ12879 1464 aa17.02■□□□□ 0.32
SEC61A2-208ENST00000419021 CLASP1Q7Z460 1538 aa16.99■□□□□ 0.31
SEC61A2-208ENST00000419021 EEA1Q15075 1411 aa16.98■□□□□ 0.31
SEC61A2-208ENST00000419021 CEP170Q5SW79 1584 aa16.98■□□□□ 0.31
SEC61A2-208ENST00000419021 NUP160Q12769 1436 aa16.97■□□□□ 0.31
SEC61A2-208ENST00000419021 PRXQ9BXM0 1461 aa16.97■□□□□ 0.31
SEC61A2-208ENST00000419021 CARMIL1Q5VZK9 1371 aa16.96■□□□□ 0.31
SEC61A2-208ENST00000419021 CHMP7Q8WUX9 453 aaPredicted RBP16.93■□□□□ 0.3
SEC61A2-208ENST00000419021 OSCARQ8IYS5 282 aa16.92■□□□□ 0.3
SEC61A2-208ENST00000419021 FBLN2P98095 1184 aa16.9■□□□□ 0.3
SEC61A2-208ENST00000419021 RAPGEF2Q9Y4G8 1499 aa16.9■□□□□ 0.3
SEC61A2-208ENST00000419021 DNAJC5Q9H3Z4 198 aa16.89■□□□□ 0.29
SEC61A2-208ENST00000419021 KIF21BO75037 1637 aa16.88■□□□□ 0.29
SEC61A2-208ENST00000419021 SHROOM2Q13796 1616 aa16.88■□□□□ 0.29
SEC61A2-208ENST00000419021 CSRNP3Q8WYN3 585 aa16.87■□□□□ 0.29
SEC61A2-208ENST00000419021 KIAA0586Q9BVV6 1533 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms