RNA–Protein interactions for RNA: ENST00000418981.1

HLA-U-204, Transcript of major histocompatibility complex, class I, U (pseudogene), humanhuman

BASIC

Gene HLA-U, Length 186 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-U-204ENST00000418981 NISCHQ9Y2I1 1504 aa29.81■■■□□ 2.36
HLA-U-204ENST00000418981 CCDC180Q9P1Z9 1646 aa26.5■■□□□ 1.83
HLA-U-204ENST00000418981 ABCC9O60706 1549 aa25.8■■□□□ 1.72
HLA-U-204ENST00000418981 NACADO15069 1562 aa25.01■■□□□ 1.59
HLA-U-204ENST00000418981 MYO15BQ96JP2 1530 aa24.99■■□□□ 1.59
HLA-U-204ENST00000418981 RB1CC1Q8TDY2 1594 aa24.97■■□□□ 1.59
HLA-U-204ENST00000418981 ZCCHC6Q5VYS8 1495 aaKnown RBP24.83■■□□□ 1.57
HLA-U-204ENST00000418981 DCAF1Q9Y4B6 1507 aa24.82■■□□□ 1.56
HLA-U-204ENST00000418981 DCAF8L2P0C7V8 631 aa24.78■■□□□ 1.56
HLA-U-204ENST00000418981 SHROOM4Q9ULL8 1493 aa24.19■■□□□ 1.46
HLA-U-204ENST00000418981 UNC13AQ9UPW8 1703 aa24.11■■□□□ 1.45
HLA-U-204ENST00000418981 PABPN1Q86U42 306 aaKnown RBP eCLIP24.1■■□□□ 1.45
HLA-U-204ENST00000418981 BICRAQ9NZM4 1560 aa24.09■■□□□ 1.45
HLA-U-204ENST00000418981 SCRIBQ14160 1630 aa23.99■■□□□ 1.43
HLA-U-204ENST00000418981 DNAJC5BQ9UF47 199 aa23.66■■□□□ 1.38
HLA-U-204ENST00000418981 EIF4G1Q04637 1599 aaKnown RBP23.51■■□□□ 1.35
HLA-U-204ENST00000418981 CC2D2AQ9P2K1 1620 aa23.36■■□□□ 1.33
HLA-U-204ENST00000418981 CECR2Q9BXF3 1484 aa23.29■■□□□ 1.32
HLA-U-204ENST00000418981 BAZ1AQ9NRL2 1556 aaPredicted RBP23.15■■□□□ 1.3
HLA-U-204ENST00000418981 NCAPD3P42695 1498 aa23.1■■□□□ 1.29
HLA-U-204ENST00000418981 SMARCA4P51532 1647 aa23.06■■□□□ 1.28
HLA-U-204ENST00000418981 SMARCA2P51531 1590 aa23.05■■□□□ 1.28
HLA-U-204ENST00000418981 ATAD2BQ9ULI0 1458 aa23.02■■□□□ 1.28
HLA-U-204ENST00000418981 PEG3Q9GZU2 1588 aa22.97■■□□□ 1.27
HLA-U-204ENST00000418981 HMGXB3Q12766 1538 aa22.94■■□□□ 1.26
HLA-U-204ENST00000418981 MROH2BQ7Z745 1585 aa22.87■■□□□ 1.25
HLA-U-204ENST00000418981 BAZ1BQ9UIG0 1483 aaKnown RBP22.81■■□□□ 1.24
HLA-U-204ENST00000418981 RSF1Q96T23 1441 aaPredicted RBP22.71■■□□□ 1.23
HLA-U-204ENST00000418981 WIZO95785 1651 aa22.53■■□□□ 1.2
HLA-U-204ENST00000418981 TOP2AP11388 1531 aaKnown RBP22.47■■□□□ 1.19
HLA-U-204ENST00000418981 LAMC3Q9Y6N6 1575 aa22.42■■□□□ 1.18
HLA-U-204ENST00000418981 CADPSQ9ULU8 1353 aa22.4■■□□□ 1.18
HLA-U-204ENST00000418981 PDS5BQ9NTI5 1447 aa22.35■■□□□ 1.17
HLA-U-204ENST00000418981 ERCC6Q03468 1493 aa22.34■■□□□ 1.17
HLA-U-204ENST00000418981 NESP48681 1621 aa22.28■■□□□ 1.16
HLA-U-204ENST00000418981 CFTRP13569 1480 aa22.26■■□□□ 1.15
HLA-U-204ENST00000418981 CUX2O14529 1486 aa22.22■■□□□ 1.15
HLA-U-204ENST00000418981 CCDC88BA6NC98 1476 aa22.17■■□□□ 1.14
HLA-U-204ENST00000418981 FANCD2Q9BXW9 1451 aa22.06■■□□□ 1.12
HLA-U-204ENST00000418981 CEP164Q9UPV0 1460 aa22.05■■□□□ 1.12
HLA-U-204ENST00000418981 MRC2Q9UBG0 1479 aa22.03■■□□□ 1.12
HLA-U-204ENST00000418981 SUPT5HO00267 1087 aaKnown RBP22■■□□□ 1.11
HLA-U-204ENST00000418981 THOC2Q8NI27 1593 aaKnown RBP21.99■■□□□ 1.11
HLA-U-204ENST00000418981 KIF21AQ7Z4S6 1674 aa21.96■■□□□ 1.11
HLA-U-204ENST00000418981 WDR62O43379 1518 aa21.94■■□□□ 1.1
HLA-U-204ENST00000418981 PRDM2Q13029 1718 aa21.89■■□□□ 1.09
HLA-U-204ENST00000418981 ABCC8Q09428 1581 aa21.88■■□□□ 1.09
HLA-U-204ENST00000418981 URB2Q14146 1524 aaKnown RBP21.78■■□□□ 1.08
HLA-U-204ENST00000418981 TOPBP1Q92547 1522 aa21.69■■□□□ 1.06
HLA-U-204ENST00000418981 DNMBPQ6XZF7 1577 aa21.68■■□□□ 1.06
HLA-U-204ENST00000418981 IFT140Q96RY7 1462 aa21.65■■□□□ 1.06
HLA-U-204ENST00000418981 DNAJC5Q9H3Z4 198 aa21.51■■□□□ 1.03
HLA-U-204ENST00000418981 POLA1P09884 1462 aaPredicted RBP21.51■■□□□ 1.03
HLA-U-204ENST00000418981 CUX1P39880 1505 aa21.47■■□□□ 1.03
HLA-U-204ENST00000418981 SOGA1O94964 1423 aa21.46■■□□□ 1.03
HLA-U-204ENST00000418981 WDR97A6NE52 1622 aa21.45■■□□□ 1.02
HLA-U-204ENST00000418981 WRNQ14191 1432 aaPredicted RBP eCLIP21.44■■□□□ 1.02
HLA-U-204ENST00000418981 FGD5Q6ZNL6 1462 aa21.42■■□□□ 1.02
HLA-U-204ENST00000418981 TARBP1Q13395 1621 aaKnown RBP21.4■■□□□ 1.02
HLA-U-204ENST00000418981 ZNF608Q9ULD9 1512 aaPredicted RBP21.37■■□□□ 1.01
HLA-U-204ENST00000418981 TOP2BQ02880 1626 aa21.34■■□□□ 1.01
HLA-U-204ENST00000418981 RAD54L2Q9Y4B4 1467 aa21.32■■□□□ 1
HLA-U-204ENST00000418981 ABCA10Q8WWZ4 1543 aa21.32■■□□□ 1
HLA-U-204ENST00000418981 OSCARQ8IYS5 282 aa21.31■■□□□ 1
HLA-U-204ENST00000418981 BIVM-ERCC5R4GMW8 1640 aa21.29■■□□□ 1
HLA-U-204ENST00000418981 AQRO60306 1485 aaKnown RBP eCLIP21.29■■□□□ 1
HLA-U-204ENST00000418981 EIF4G3O43432 1585 aaKnown RBP21.28■■□□□ 1
HLA-U-204ENST00000418981 TDRD9Q8NDG6 1382 aaKnown RBP21.27■■□□□ 1
HLA-U-204ENST00000418981 GRIN2BQ13224 1484 aa21.25■□□□□ 0.99
HLA-U-204ENST00000418981 SYNJ1O43426 1573 aa21.22■□□□□ 0.99
HLA-U-204ENST00000418981 MAGI1Q96QZ7 1491 aaPredicted RBP21.21■□□□□ 0.99
HLA-U-204ENST00000418981 GAPVD1Q14C86 1478 aa21.2■□□□□ 0.98
HLA-U-204ENST00000418981 ABCA5Q8WWZ7 1642 aa21.12■□□□□ 0.97
HLA-U-204ENST00000418981 SNAPC4Q5SXM2 1469 aa21.11■□□□□ 0.97
HLA-U-204ENST00000418981 SYNJ2O15056 1496 aa21.1■□□□□ 0.97
HLA-U-204ENST00000418981 CHMP7Q8WUX9 453 aaPredicted RBP21.1■□□□□ 0.97
HLA-U-204ENST00000418981 ERICH3Q5RHP9 1530 aa21.08■□□□□ 0.96
HLA-U-204ENST00000418981 KIF27Q86VH2 1401 aa21.04■□□□□ 0.96
HLA-U-204ENST00000418981 FBLN2P98095 1184 aa21.04■□□□□ 0.96
HLA-U-204ENST00000418981 FHAD1B1AJZ9 1412 aa21.03■□□□□ 0.96
HLA-U-204ENST00000418981 PBRM1Q86U86 1689 aa20.98■□□□□ 0.95
HLA-U-204ENST00000418981 CHD1O14646 1710 aa20.92■□□□□ 0.94
HLA-U-204ENST00000418981 TRIM41Q8WV44 630 aa20.92■□□□□ 0.94
HLA-U-204ENST00000418981 IGF1RP08069 1367 aa20.92■□□□□ 0.94
HLA-U-204ENST00000418981 GRIN2AQ12879 1464 aa20.92■□□□□ 0.94
HLA-U-204ENST00000418981 ADAMTS12P58397 1594 aa20.92■□□□□ 0.94
HLA-U-204ENST00000418981 NUP160Q12769 1436 aa20.88■□□□□ 0.93
HLA-U-204ENST00000418981 CLASP1Q7Z460 1538 aa20.87■□□□□ 0.93
HLA-U-204ENST00000418981 CUL7Q14999 1698 aa20.82■□□□□ 0.92
HLA-U-204ENST00000418981 ARHGEF11O15085 1522 aa20.82■□□□□ 0.92
HLA-U-204ENST00000418981 CARMIL1Q5VZK9 1371 aa20.8■□□□□ 0.92
HLA-U-204ENST00000418981 RIMBP3CA6NJZ7 1639 aa20.74■□□□□ 0.91
HLA-U-204ENST00000418981 RIMBP3BA6NNM3 1639 aa20.74■□□□□ 0.91
HLA-U-204ENST00000418981 RIMBP3Q9UFD9 1639 aa20.74■□□□□ 0.91
HLA-U-204ENST00000418981 EEA1Q15075 1411 aa20.73■□□□□ 0.91
HLA-U-204ENST00000418981 CEP170Q5SW79 1584 aa20.71■□□□□ 0.91
HLA-U-204ENST00000418981 KIAA0586Q9BVV6 1533 aa20.7■□□□□ 0.9
HLA-U-204ENST00000418981 JPH4Q96JJ6 628 aa20.68■□□□□ 0.9
HLA-U-204ENST00000418981 RAPGEF2Q9Y4G8 1499 aa20.68■□□□□ 0.9
HLA-U-204ENST00000418981 SHROOM2Q13796 1616 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms