RNA–Protein interactions for RNA: ENST00000418713.5

RPUSD3-202, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 955 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-202ENST00000418713 NISCHQ9Y2I1 1504 aa47.58■■■■■ 5.21
RPUSD3-202ENST00000418713 CCDC180Q9P1Z9 1646 aa42.27■■■■■ 4.36
RPUSD3-202ENST00000418713 ABCC9O60706 1549 aa41.2■■■■■ 4.19
RPUSD3-202ENST00000418713 DCAF8L2P0C7V8 631 aa39.87■■■■□ 3.97
RPUSD3-202ENST00000418713 RB1CC1Q8TDY2 1594 aa39.8■■■■□ 3.96
RPUSD3-202ENST00000418713 NACADO15069 1562 aa39.79■■■■□ 3.96
RPUSD3-202ENST00000418713 ZCCHC6Q5VYS8 1495 aaKnown RBP39.62■■■■□ 3.93
RPUSD3-202ENST00000418713 MYO15BQ96JP2 1530 aa39.61■■■■□ 3.93
RPUSD3-202ENST00000418713 DCAF1Q9Y4B6 1507 aa39.45■■■■□ 3.91
RPUSD3-202ENST00000418713 UNC13AQ9UPW8 1703 aa38.67■■■■□ 3.78
RPUSD3-202ENST00000418713 PABPN1Q86U42 306 aaKnown RBP eCLIP38.56■■■■□ 3.76
RPUSD3-202ENST00000418713 SCRIBQ14160 1630 aa38.47■■■■□ 3.75
RPUSD3-202ENST00000418713 BICRAQ9NZM4 1560 aa38.39■■■■□ 3.74
RPUSD3-202ENST00000418713 SHROOM4Q9ULL8 1493 aa38.25■■■■□ 3.71
RPUSD3-202ENST00000418713 DNAJC5BQ9UF47 199 aa37.85■■■■□ 3.65
RPUSD3-202ENST00000418713 EIF4G1Q04637 1599 aaKnown RBP37.46■■■■□ 3.59
RPUSD3-202ENST00000418713 CC2D2AQ9P2K1 1620 aa37.28■■■■□ 3.56
RPUSD3-202ENST00000418713 CECR2Q9BXF3 1484 aa37.08■■■■□ 3.53
RPUSD3-202ENST00000418713 BAZ1AQ9NRL2 1556 aaPredicted RBP36.93■■■■□ 3.5
RPUSD3-202ENST00000418713 SMARCA4P51532 1647 aa36.85■■■■□ 3.49
RPUSD3-202ENST00000418713 SMARCA2P51531 1590 aa36.71■■■■□ 3.47
RPUSD3-202ENST00000418713 NCAPD3P42695 1498 aa36.7■■■■□ 3.47
RPUSD3-202ENST00000418713 ATAD2BQ9ULI0 1458 aa36.69■■■■□ 3.46
RPUSD3-202ENST00000418713 MROH2BQ7Z745 1585 aa36.58■■■■□ 3.45
RPUSD3-202ENST00000418713 PEG3Q9GZU2 1588 aa36.54■■■■□ 3.44
RPUSD3-202ENST00000418713 HMGXB3Q12766 1538 aa36.49■■■■□ 3.43
RPUSD3-202ENST00000418713 BAZ1BQ9UIG0 1483 aaKnown RBP36.43■■■■□ 3.42
RPUSD3-202ENST00000418713 RSF1Q96T23 1441 aaPredicted RBP36.27■■■■□ 3.4
RPUSD3-202ENST00000418713 WIZO95785 1651 aa36.19■■■■□ 3.38
RPUSD3-202ENST00000418713 TOP2AP11388 1531 aaKnown RBP35.89■■■■□ 3.34
RPUSD3-202ENST00000418713 LAMC3Q9Y6N6 1575 aa35.71■■■■□ 3.31
RPUSD3-202ENST00000418713 CADPSQ9ULU8 1353 aa35.66■■■■□ 3.3
RPUSD3-202ENST00000418713 ERCC6Q03468 1493 aa35.63■■■■□ 3.29
RPUSD3-202ENST00000418713 NESP48681 1621 aa35.61■■■■□ 3.29
RPUSD3-202ENST00000418713 PDS5BQ9NTI5 1447 aa35.56■■■■□ 3.28
RPUSD3-202ENST00000418713 SUPT5HO00267 1087 aaKnown RBP35.52■■■■□ 3.28
RPUSD3-202ENST00000418713 CCDC88BA6NC98 1476 aa35.48■■■■□ 3.27
RPUSD3-202ENST00000418713 CFTRP13569 1480 aa35.41■■■■□ 3.26
RPUSD3-202ENST00000418713 CUX2O14529 1486 aa35.22■■■■□ 3.23
RPUSD3-202ENST00000418713 KIF21AQ7Z4S6 1674 aa35.2■■■■□ 3.23
RPUSD3-202ENST00000418713 FANCD2Q9BXW9 1451 aa35.19■■■■□ 3.22
RPUSD3-202ENST00000418713 CEP164Q9UPV0 1460 aa35.16■■■■□ 3.22
RPUSD3-202ENST00000418713 PRDM2Q13029 1718 aa35.09■■■■□ 3.21
RPUSD3-202ENST00000418713 MRC2Q9UBG0 1479 aa35.08■■■■□ 3.21
RPUSD3-202ENST00000418713 THOC2Q8NI27 1593 aaKnown RBP35.06■■■■□ 3.2
RPUSD3-202ENST00000418713 WDR62O43379 1518 aa34.91■■■■□ 3.18
RPUSD3-202ENST00000418713 ABCC8Q09428 1581 aa34.81■■■■□ 3.16
RPUSD3-202ENST00000418713 URB2Q14146 1524 aaKnown RBP34.74■■■■□ 3.15
RPUSD3-202ENST00000418713 TOPBP1Q92547 1522 aa34.61■■■■□ 3.13
RPUSD3-202ENST00000418713 DNAJC5Q9H3Z4 198 aa34.6■■■■□ 3.13
RPUSD3-202ENST00000418713 DNMBPQ6XZF7 1577 aa34.59■■■■□ 3.13
RPUSD3-202ENST00000418713 IFT140Q96RY7 1462 aa34.46■■■■□ 3.11
RPUSD3-202ENST00000418713 CUX1P39880 1505 aa34.32■■■■□ 3.08
RPUSD3-202ENST00000418713 POLA1P09884 1462 aaPredicted RBP34.31■■■■□ 3.08
RPUSD3-202ENST00000418713 SOGA1O94964 1423 aa34.28■■■■□ 3.08
RPUSD3-202ENST00000418713 WRNQ14191 1432 aaPredicted RBP eCLIP34.27■■■■□ 3.08
RPUSD3-202ENST00000418713 FGD5Q6ZNL6 1462 aa34.25■■■■□ 3.07
RPUSD3-202ENST00000418713 TARBP1Q13395 1621 aaKnown RBP34.16■■■■□ 3.06
RPUSD3-202ENST00000418713 RAD54L2Q9Y4B4 1467 aa34.14■■■■□ 3.06
RPUSD3-202ENST00000418713 ZNF608Q9ULD9 1512 aaPredicted RBP34.13■■■■□ 3.05
RPUSD3-202ENST00000418713 TOP2BQ02880 1626 aa34.12■■■■□ 3.05
RPUSD3-202ENST00000418713 BIVM-ERCC5R4GMW8 1640 aa34.08■■■■□ 3.05
RPUSD3-202ENST00000418713 WDR97A6NE52 1622 aa34.07■■■■□ 3.04
RPUSD3-202ENST00000418713 AQRO60306 1485 aaKnown RBP eCLIP34.03■■■■□ 3.043e-6■■□□□ 13.8
RPUSD3-202ENST00000418713 SYNJ1O43426 1573 aa34.02■■■■□ 3.04
RPUSD3-202ENST00000418713 EIF4G3O43432 1585 aaKnown RBP34.01■■■■□ 3.03
RPUSD3-202ENST00000418713 TDRD9Q8NDG6 1382 aaKnown RBP34■■■■□ 3.03
RPUSD3-202ENST00000418713 ABCA10Q8WWZ4 1543 aa33.97■■■■□ 3.03
RPUSD3-202ENST00000418713 OSCARQ8IYS5 282 aa33.89■■■■□ 3.02
RPUSD3-202ENST00000418713 GRIN2BQ13224 1484 aa33.85■■■■□ 3.01
RPUSD3-202ENST00000418713 GAPVD1Q14C86 1478 aa33.85■■■■□ 3.01
RPUSD3-202ENST00000418713 MAGI1Q96QZ7 1491 aaPredicted RBP33.76■■■□□ 2.99
RPUSD3-202ENST00000418713 FBLN2P98095 1184 aa33.74■■■□□ 2.99
RPUSD3-202ENST00000418713 ABCA5Q8WWZ7 1642 aa33.72■■■□□ 2.99
RPUSD3-202ENST00000418713 CHMP7Q8WUX9 453 aaPredicted RBP33.71■■■□□ 2.99
RPUSD3-202ENST00000418713 SNAPC4Q5SXM2 1469 aa33.69■■■□□ 2.98
RPUSD3-202ENST00000418713 TRIM41Q8WV44 630 aa33.66■■■□□ 2.98
RPUSD3-202ENST00000418713 PBRM1Q86U86 1689 aa33.65■■■□□ 2.98
RPUSD3-202ENST00000418713 KIF27Q86VH2 1401 aa33.62■■■□□ 2.97
RPUSD3-202ENST00000418713 SYNJ2O15056 1496 aa33.61■■■□□ 2.97
RPUSD3-202ENST00000418713 ERICH3Q5RHP9 1530 aa33.59■■■□□ 2.97
RPUSD3-202ENST00000418713 CHD1O14646 1710 aa33.54■■■□□ 2.96
RPUSD3-202ENST00000418713 FHAD1B1AJZ9 1412 aa33.5■■■□□ 2.95
RPUSD3-202ENST00000418713 ADAMTS12P58397 1594 aa33.4■■■□□ 2.94
RPUSD3-202ENST00000418713 IGF1RP08069 1367 aa33.4■■■□□ 2.94
RPUSD3-202ENST00000418713 GRIN2AQ12879 1464 aa33.37■■■□□ 2.93
RPUSD3-202ENST00000418713 CUL7Q14999 1698 aa33.29■■■□□ 2.92
RPUSD3-202ENST00000418713 CARMIL1Q5VZK9 1371 aa33.24■■■□□ 2.91
RPUSD3-202ENST00000418713 CLASP1Q7Z460 1538 aa33.22■■■□□ 2.91
RPUSD3-202ENST00000418713 NUP160Q12769 1436 aa33.21■■■□□ 2.91
RPUSD3-202ENST00000418713 CHIC1Q5VXU3 224 aa33.2■■■□□ 2.91
RPUSD3-202ENST00000418713 ARHGEF11O15085 1522 aa33.13■■■□□ 2.89
RPUSD3-202ENST00000418713 RUSC2Q8N2Y8 1516 aa33.11■■■□□ 2.89
RPUSD3-202ENST00000418713 EEA1Q15075 1411 aa33.1■■■□□ 2.89
RPUSD3-202ENST00000418713 RIMBP3CA6NJZ7 1639 aa33.1■■■□□ 2.89
RPUSD3-202ENST00000418713 RIMBP3BA6NNM3 1639 aa33.1■■■□□ 2.89
RPUSD3-202ENST00000418713 RIMBP3Q9UFD9 1639 aa33.1■■■□□ 2.89
RPUSD3-202ENST00000418713 CEP170Q5SW79 1584 aa33.09■■■□□ 2.89
RPUSD3-202ENST00000418713 RAPGEF2Q9Y4G8 1499 aa33.05■■■□□ 2.88
RPUSD3-202ENST00000418713 CSRNP3Q8WYN3 585 aa33.02■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms