RNA–Protein interactions for RNA: ENST00000417841.5

SHISA5-203, Transcript of shisa family member 5, humanhuman

TSL 4

Gene SHISA5, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-203ENST00000417841 NISCHQ9Y2I1 1504 aa44.55■■■■■ 4.72
SHISA5-203ENST00000417841 CCDC180Q9P1Z9 1646 aa39.65■■■■□ 3.94
SHISA5-203ENST00000417841 ABCC9O60706 1549 aa38.44■■■■□ 3.74
SHISA5-203ENST00000417841 RB1CC1Q8TDY2 1594 aa37.21■■■■□ 3.55
SHISA5-203ENST00000417841 NACADO15069 1562 aa37.2■■■■□ 3.55
SHISA5-203ENST00000417841 ZCCHC6Q5VYS8 1495 aaKnown RBP37.14■■■■□ 3.54
SHISA5-203ENST00000417841 DCAF8L2P0C7V8 631 aa37.11■■■■□ 3.53
SHISA5-203ENST00000417841 MYO15BQ96JP2 1530 aa37.05■■■■□ 3.52
SHISA5-203ENST00000417841 DCAF1Q9Y4B6 1507 aa36.94■■■■□ 3.5
SHISA5-203ENST00000417841 UNC13AQ9UPW8 1703 aa36.33■■■■□ 3.41
SHISA5-203ENST00000417841 SCRIBQ14160 1630 aa36.06■■■■□ 3.36
SHISA5-203ENST00000417841 BICRAQ9NZM4 1560 aa35.93■■■■□ 3.34
SHISA5-203ENST00000417841 PABPN1Q86U42 306 aaKnown RBP eCLIP35.9■■■■□ 3.34
SHISA5-203ENST00000417841 SHROOM4Q9ULL8 1493 aa35.76■■■■□ 3.32
SHISA5-203ENST00000417841 EIF4G1Q04637 1599 aaKnown RBP35.03■■■■□ 3.2
SHISA5-203ENST00000417841 DNAJC5BQ9UF47 199 aa34.98■■■■□ 3.19
SHISA5-203ENST00000417841 CC2D2AQ9P2K1 1620 aa34.84■■■■□ 3.17
SHISA5-203ENST00000417841 CECR2Q9BXF3 1484 aa34.58■■■■□ 3.13
SHISA5-203ENST00000417841 BAZ1AQ9NRL2 1556 aaPredicted RBP34.57■■■■□ 3.13
SHISA5-203ENST00000417841 SMARCA4P51532 1647 aa34.55■■■■□ 3.12
SHISA5-203ENST00000417841 SMARCA2P51531 1590 aa34.35■■■■□ 3.09
SHISA5-203ENST00000417841 MROH2BQ7Z745 1585 aa34.28■■■■□ 3.08
SHISA5-203ENST00000417841 ATAD2BQ9ULI0 1458 aa34.27■■■■□ 3.08
SHISA5-203ENST00000417841 NCAPD3P42695 1498 aa34.26■■■■□ 3.07
SHISA5-203ENST00000417841 PEG3Q9GZU2 1588 aa34.23■■■■□ 3.07
SHISA5-203ENST00000417841 HMGXB3Q12766 1538 aa34.15■■■■□ 3.06
SHISA5-203ENST00000417841 BAZ1BQ9UIG0 1483 aaKnown RBP34.06■■■■□ 3.04
SHISA5-203ENST00000417841 WIZO95785 1651 aa33.96■■■■□ 3.03
SHISA5-203ENST00000417841 RSF1Q96T23 1441 aaPredicted RBP33.96■■■■□ 3.03
SHISA5-203ENST00000417841 TOP2AP11388 1531 aaKnown RBP33.65■■■□□ 2.98
SHISA5-203ENST00000417841 LAMC3Q9Y6N6 1575 aa33.4■■■□□ 2.94
SHISA5-203ENST00000417841 NESP48681 1621 aa33.28■■■□□ 2.92
SHISA5-203ENST00000417841 CADPSQ9ULU8 1353 aa33.26■■■□□ 2.92
SHISA5-203ENST00000417841 SUPT5HO00267 1087 aaKnown RBP33.23■■■□□ 2.91
SHISA5-203ENST00000417841 ERCC6Q03468 1493 aa33.22■■■□□ 2.91
SHISA5-203ENST00000417841 CCDC88BA6NC98 1476 aa33.19■■■□□ 2.9
SHISA5-203ENST00000417841 PDS5BQ9NTI5 1447 aa33.16■■■□□ 2.9
SHISA5-203ENST00000417841 CFTRP13569 1480 aa33.1■■■□□ 2.89
SHISA5-203ENST00000417841 PRDM2Q13029 1718 aa33.02■■■□□ 2.88
SHISA5-203ENST00000417841 KIF21AQ7Z4S6 1674 aa33.01■■■□□ 2.88
SHISA5-203ENST00000417841 FANCD2Q9BXW9 1451 aa32.88■■■□□ 2.85
SHISA5-203ENST00000417841 CEP164Q9UPV0 1460 aa32.86■■■□□ 2.85
SHISA5-203ENST00000417841 THOC2Q8NI27 1593 aaKnown RBP32.83■■■□□ 2.85
SHISA5-203ENST00000417841 CUX2O14529 1486 aa32.82■■■□□ 2.84
SHISA5-203ENST00000417841 MRC2Q9UBG0 1479 aa32.76■■■□□ 2.84
SHISA5-203ENST00000417841 WDR62O43379 1518 aa32.64■■■□□ 2.82
SHISA5-203ENST00000417841 ABCC8Q09428 1581 aa32.51■■■□□ 2.79
SHISA5-203ENST00000417841 URB2Q14146 1524 aaKnown RBP32.49■■■□□ 2.79
SHISA5-203ENST00000417841 DNMBPQ6XZF7 1577 aa32.4■■■□□ 2.78
SHISA5-203ENST00000417841 TOPBP1Q92547 1522 aa32.37■■■□□ 2.77
SHISA5-203ENST00000417841 IFT140Q96RY7 1462 aa32.17■■■□□ 2.74
SHISA5-203ENST00000417841 CUX1P39880 1505 aa32.16■■■□□ 2.74
SHISA5-203ENST00000417841 POLA1P09884 1462 aaPredicted RBP32.1■■■□□ 2.73
SHISA5-203ENST00000417841 WRNQ14191 1432 aaPredicted RBP eCLIP32.08■■■□□ 2.73
SHISA5-203ENST00000417841 FGD5Q6ZNL6 1462 aa32.05■■■□□ 2.72
SHISA5-203ENST00000417841 BIVM-ERCC5R4GMW8 1640 aa32.02■■■□□ 2.72
SHISA5-203ENST00000417841 TOP2BQ02880 1626 aa32.01■■■□□ 2.72
SHISA5-203ENST00000417841 TARBP1Q13395 1621 aaKnown RBP32■■■□□ 2.71
SHISA5-203ENST00000417841 SOGA1O94964 1423 aa31.99■■■□□ 2.71
SHISA5-203ENST00000417841 SYNJ1O43426 1573 aa31.94■■■□□ 2.7
SHISA5-203ENST00000417841 WDR97A6NE52 1622 aa31.91■■■□□ 2.7
SHISA5-203ENST00000417841 RAD54L2Q9Y4B4 1467 aa31.91■■■□□ 2.7
SHISA5-203ENST00000417841 ZNF608Q9ULD9 1512 aaPredicted RBP31.89■■■□□ 2.7
SHISA5-203ENST00000417841 EIF4G3O43432 1585 aaKnown RBP31.87■■■□□ 2.69
SHISA5-203ENST00000417841 ABCA10Q8WWZ4 1543 aa31.78■■■□□ 2.68
SHISA5-203ENST00000417841 AQRO60306 1485 aaKnown RBP eCLIP31.75■■■□□ 2.67
SHISA5-203ENST00000417841 TDRD9Q8NDG6 1382 aaKnown RBP31.72■■■□□ 2.67
SHISA5-203ENST00000417841 GAPVD1Q14C86 1478 aa31.64■■■□□ 2.66
SHISA5-203ENST00000417841 ABCA5Q8WWZ7 1642 aa31.64■■■□□ 2.65
SHISA5-203ENST00000417841 GRIN2BQ13224 1484 aa31.63■■■□□ 2.65
SHISA5-203ENST00000417841 PBRM1Q86U86 1689 aa31.61■■■□□ 2.65
SHISA5-203ENST00000417841 MAGI1Q96QZ7 1491 aaPredicted RBP31.55■■■□□ 2.64
SHISA5-203ENST00000417841 DNAJC5Q9H3Z4 198 aa31.51■■■□□ 2.63
SHISA5-203ENST00000417841 SNAPC4Q5SXM2 1469 aa31.51■■■□□ 2.63
SHISA5-203ENST00000417841 OSCARQ8IYS5 282 aa31.47■■■□□ 2.63
SHISA5-203ENST00000417841 TRIM41Q8WV44 630 aa31.46■■■□□ 2.63
SHISA5-203ENST00000417841 CHD1O14646 1710 aa31.46■■■□□ 2.63
SHISA5-203ENST00000417841 ERICH3Q5RHP9 1530 aa31.45■■■□□ 2.63
SHISA5-203ENST00000417841 KIF27Q86VH2 1401 aa31.42■■■□□ 2.62
SHISA5-203ENST00000417841 SYNJ2O15056 1496 aa31.4■■■□□ 2.62
SHISA5-203ENST00000417841 FBLN2P98095 1184 aa31.39■■■□□ 2.62
SHISA5-203ENST00000417841 CHMP7Q8WUX9 453 aaPredicted RBP31.38■■■□□ 2.61
SHISA5-203ENST00000417841 ADAMTS12P58397 1594 aa31.32■■■□□ 2.6
SHISA5-203ENST00000417841 FHAD1B1AJZ9 1412 aa31.3■■■□□ 2.6
SHISA5-203ENST00000417841 CUL7Q14999 1698 aa31.25■■■□□ 2.59
SHISA5-203ENST00000417841 GRIN2AQ12879 1464 aa31.2■■■□□ 2.58
SHISA5-203ENST00000417841 IGF1RP08069 1367 aa31.18■■■□□ 2.58
SHISA5-203ENST00000417841 CHIC1Q5VXU3 224 aa31.11■■■□□ 2.57
SHISA5-203ENST00000417841 CLASP1Q7Z460 1538 aa31.08■■■□□ 2.57
SHISA5-203ENST00000417841 CARMIL1Q5VZK9 1371 aa31.05■■■□□ 2.56
SHISA5-203ENST00000417841 RUSC2Q8N2Y8 1516 aa31.03■■■□□ 2.56
SHISA5-203ENST00000417841 NUP160Q12769 1436 aa31.03■■■□□ 2.56
SHISA5-203ENST00000417841 EEA1Q15075 1411 aa31■■■□□ 2.55
SHISA5-203ENST00000417841 CEP170Q5SW79 1584 aa31■■■□□ 2.55
SHISA5-203ENST00000417841 RIMBP3CA6NJZ7 1639 aa30.92■■■□□ 2.54
SHISA5-203ENST00000417841 RIMBP3BA6NNM3 1639 aa30.92■■■□□ 2.54
SHISA5-203ENST00000417841 RIMBP3Q9UFD9 1639 aa30.92■■■□□ 2.54
SHISA5-203ENST00000417841 RAPGEF2Q9Y4G8 1499 aa30.92■■■□□ 2.54
SHISA5-203ENST00000417841 ARHGEF11O15085 1522 aa30.92■■■□□ 2.54
SHISA5-203ENST00000417841 CSRNP3Q8WYN3 585 aa30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms