RNA–Protein interactions for RNA: ENST00000417633.1

SYNC-203, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-203ENST00000417633 NISCHQ9Y2I1 1504 aa27.31■■□□□ 1.96
SYNC-203ENST00000417633 CCDC180Q9P1Z9 1646 aa24.06■■□□□ 1.44
SYNC-203ENST00000417633 ABCC9O60706 1549 aa23.11■■□□□ 1.29
SYNC-203ENST00000417633 ZCCHC6Q5VYS8 1495 aaKnown RBP22.83■■□□□ 1.25
SYNC-203ENST00000417633 DCAF1Q9Y4B6 1507 aa22.64■■□□□ 1.21
SYNC-203ENST00000417633 DCAF8L2P0C7V8 631 aa22.6■■□□□ 1.21
SYNC-203ENST00000417633 MYO15BQ96JP2 1530 aa22.59■■□□□ 1.21
SYNC-203ENST00000417633 NACADO15069 1562 aa22.55■■□□□ 1.2
SYNC-203ENST00000417633 RB1CC1Q8TDY2 1594 aa22.43■■□□□ 1.18
SYNC-203ENST00000417633 SCRIBQ14160 1630 aa21.95■■□□□ 1.1
SYNC-203ENST00000417633 UNC13AQ9UPW8 1703 aa21.92■■□□□ 1.1
SYNC-203ENST00000417633 SHROOM4Q9ULL8 1493 aa21.77■■□□□ 1.08
SYNC-203ENST00000417633 BICRAQ9NZM4 1560 aa21.75■■□□□ 1.07
SYNC-203ENST00000417633 PABPN1Q86U42 306 aaKnown RBP eCLIP21.68■■□□□ 1.06
SYNC-203ENST00000417633 CECR2Q9BXF3 1484 aa21.21■□□□□ 0.99
SYNC-203ENST00000417633 EIF4G1Q04637 1599 aaKnown RBP21.13■□□□□ 0.97
SYNC-203ENST00000417633 BAZ1AQ9NRL2 1556 aaPredicted RBP21.12■□□□□ 0.97
SYNC-203ENST00000417633 SMARCA4P51532 1647 aa21.07■□□□□ 0.96
SYNC-203ENST00000417633 MROH2BQ7Z745 1585 aa21.04■□□□□ 0.96
SYNC-203ENST00000417633 RSF1Q96T23 1441 aaPredicted RBP20.97■□□□□ 0.95
SYNC-203ENST00000417633 CC2D2AQ9P2K1 1620 aa20.93■□□□□ 0.94
SYNC-203ENST00000417633 PEG3Q9GZU2 1588 aa20.89■□□□□ 0.94
SYNC-203ENST00000417633 ATAD2BQ9ULI0 1458 aa20.88■□□□□ 0.93
SYNC-203ENST00000417633 DNAJC5BQ9UF47 199 aa20.87■□□□□ 0.93
SYNC-203ENST00000417633 SMARCA2P51531 1590 aa20.86■□□□□ 0.93
SYNC-203ENST00000417633 WIZO95785 1651 aa20.82■□□□□ 0.92
SYNC-203ENST00000417633 NCAPD3P42695 1498 aa20.81■□□□□ 0.92
SYNC-203ENST00000417633 SUPT5HO00267 1087 aaKnown RBP20.74■□□□□ 0.91
SYNC-203ENST00000417633 HMGXB3Q12766 1538 aa20.73■□□□□ 0.91
SYNC-203ENST00000417633 BAZ1BQ9UIG0 1483 aaKnown RBP20.7■□□□□ 0.9
SYNC-203ENST00000417633 TOP2AP11388 1531 aaKnown RBP20.63■□□□□ 0.89
SYNC-203ENST00000417633 CCDC88BA6NC98 1476 aa20.41■□□□□ 0.86
SYNC-203ENST00000417633 CADPSQ9ULU8 1353 aa20.22■□□□□ 0.83
SYNC-203ENST00000417633 CFTRP13569 1480 aa20.19■□□□□ 0.82
SYNC-203ENST00000417633 LAMC3Q9Y6N6 1575 aa20.17■□□□□ 0.82
SYNC-203ENST00000417633 NESP48681 1621 aa20.13■□□□□ 0.81
SYNC-203ENST00000417633 PRDM2Q13029 1718 aa20.04■□□□□ 0.8
SYNC-203ENST00000417633 PDS5BQ9NTI5 1447 aa20.02■□□□□ 0.8
SYNC-203ENST00000417633 FANCD2Q9BXW9 1451 aa19.96■□□□□ 0.79
SYNC-203ENST00000417633 KIF21AQ7Z4S6 1674 aa19.89■□□□□ 0.77
SYNC-203ENST00000417633 CEP164Q9UPV0 1460 aa19.88■□□□□ 0.77
SYNC-203ENST00000417633 ERCC6Q03468 1493 aa19.87■□□□□ 0.77
SYNC-203ENST00000417633 MRC2Q9UBG0 1479 aa19.78■□□□□ 0.76
SYNC-203ENST00000417633 ABCC8Q09428 1581 aa19.75■□□□□ 0.75
SYNC-203ENST00000417633 WRNQ14191 1432 aaPredicted RBP eCLIP19.75■□□□□ 0.75
SYNC-203ENST00000417633 URB2Q14146 1524 aaKnown RBP19.73■□□□□ 0.75
SYNC-203ENST00000417633 THOC2Q8NI27 1593 aaKnown RBP19.73■□□□□ 0.75
SYNC-203ENST00000417633 CUX1P39880 1505 aa19.71■□□□□ 0.75
SYNC-203ENST00000417633 DNMBPQ6XZF7 1577 aa19.7■□□□□ 0.74
SYNC-203ENST00000417633 WDR62O43379 1518 aa19.7■□□□□ 0.74
SYNC-203ENST00000417633 TOPBP1Q92547 1522 aa19.7■□□□□ 0.74
SYNC-203ENST00000417633 CHIC1Q5VXU3 224 aa19.66■□□□□ 0.74
SYNC-203ENST00000417633 TOP2BQ02880 1626 aa19.65■□□□□ 0.74
SYNC-203ENST00000417633 SYNJ1O43426 1573 aa19.65■□□□□ 0.74
SYNC-203ENST00000417633 BIVM-ERCC5R4GMW8 1640 aa19.65■□□□□ 0.74
SYNC-203ENST00000417633 TRIM41Q8WV44 630 aa19.6■□□□□ 0.73
SYNC-203ENST00000417633 POLA1P09884 1462 aaPredicted RBP19.56■□□□□ 0.72
SYNC-203ENST00000417633 FGD5Q6ZNL6 1462 aa19.56■□□□□ 0.72
SYNC-203ENST00000417633 CUX2O14529 1486 aa19.54■□□□□ 0.72
SYNC-203ENST00000417633 SOGA1O94964 1423 aa19.51■□□□□ 0.71
SYNC-203ENST00000417633 IFT140Q96RY7 1462 aa19.47■□□□□ 0.71
SYNC-203ENST00000417633 RAD54L2Q9Y4B4 1467 aa19.46■□□□□ 0.71
SYNC-203ENST00000417633 TARBP1Q13395 1621 aaKnown RBP19.44■□□□□ 0.7
SYNC-203ENST00000417633 ABCA10Q8WWZ4 1543 aa19.42■□□□□ 0.7
SYNC-203ENST00000417633 WDR97A6NE52 1622 aa19.37■□□□□ 0.69
SYNC-203ENST00000417633 ZNF608Q9ULD9 1512 aaPredicted RBP19.33■□□□□ 0.68
SYNC-203ENST00000417633 TDRD9Q8NDG6 1382 aaKnown RBP19.32■□□□□ 0.68
SYNC-203ENST00000417633 KIF27Q86VH2 1401 aa19.31■□□□□ 0.68
SYNC-203ENST00000417633 AQRO60306 1485 aaKnown RBP eCLIP19.28■□□□□ 0.68
SYNC-203ENST00000417633 ABCA5Q8WWZ7 1642 aa19.28■□□□□ 0.68
SYNC-203ENST00000417633 GAPVD1Q14C86 1478 aa19.27■□□□□ 0.67
SYNC-203ENST00000417633 RUSC2Q8N2Y8 1516 aa19.25■□□□□ 0.67
SYNC-203ENST00000417633 EIF4G3O43432 1585 aaKnown RBP19.25■□□□□ 0.67
SYNC-203ENST00000417633 EEA1Q15075 1411 aa19.25■□□□□ 0.67
SYNC-203ENST00000417633 IGF1RP08069 1367 aa19.21■□□□□ 0.67
SYNC-203ENST00000417633 GRIN2BQ13224 1484 aa19.21■□□□□ 0.67
SYNC-203ENST00000417633 ERICH3Q5RHP9 1530 aa19.2■□□□□ 0.66
SYNC-203ENST00000417633 PBRM1Q86U86 1689 aa19.17■□□□□ 0.66
SYNC-203ENST00000417633 CSRNP3Q8WYN3 585 aa19.16■□□□□ 0.66
SYNC-203ENST00000417633 FAM9AQ8IZU1 332 aaPredicted RBP19.13■□□□□ 0.65
SYNC-203ENST00000417633 MAGI1Q96QZ7 1491 aaPredicted RBP19.12■□□□□ 0.65
SYNC-203ENST00000417633 SNAPC4Q5SXM2 1469 aa19.1■□□□□ 0.65
SYNC-203ENST00000417633 CARMIL1Q5VZK9 1371 aa19.09■□□□□ 0.65
SYNC-203ENST00000417633 FHAD1B1AJZ9 1412 aa19.08■□□□□ 0.64
SYNC-203ENST00000417633 CUL7Q14999 1698 aa19.08■□□□□ 0.64
SYNC-203ENST00000417633 PRXQ9BXM0 1461 aa19.07■□□□□ 0.64
SYNC-203ENST00000417633 ADAMTS12P58397 1594 aa19.05■□□□□ 0.64
SYNC-203ENST00000417633 SYNJ2O15056 1496 aa19.03■□□□□ 0.64
SYNC-203ENST00000417633 RAPGEF2Q9Y4G8 1499 aa19.01■□□□□ 0.63
SYNC-203ENST00000417633 CHMP7Q8WUX9 453 aaPredicted RBP19■□□□□ 0.63
SYNC-203ENST00000417633 KIF21BO75037 1637 aa18.98■□□□□ 0.63
SYNC-203ENST00000417633 GRIN2AQ12879 1464 aa18.96■□□□□ 0.63
SYNC-203ENST00000417633 FBLN2P98095 1184 aa18.95■□□□□ 0.62
SYNC-203ENST00000417633 CHD1O14646 1710 aa18.92■□□□□ 0.62
SYNC-203ENST00000417633 GOLGA3Q08378 1498 aa18.9■□□□□ 0.62
SYNC-203ENST00000417633 NUP160Q12769 1436 aa18.88■□□□□ 0.61
SYNC-203ENST00000417633 LOC105371045A0A1W2PR82 267 aa18.84■□□□□ 0.61
SYNC-203ENST00000417633 OSCARQ8IYS5 282 aa18.84■□□□□ 0.61
SYNC-203ENST00000417633 CEP170Q5SW79 1584 aa18.83■□□□□ 0.6
SYNC-203ENST00000417633 UBTFP17480 764 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms