RNA–Protein interactions for RNA: ENST00000417535.7

CSF2RA-208, Transcript of colony stimulating factor 2 receptor alpha subunit, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSF2RA, Length 1,955 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF2RA-208ENST00000417535 NISCHQ9Y2I1 1504 aa29.21■■■□□ 2.27
CSF2RA-208ENST00000417535 CCDC180Q9P1Z9 1646 aa25.68■■□□□ 1.7
CSF2RA-208ENST00000417535 ABCC9O60706 1549 aa24.84■■□□□ 1.57
CSF2RA-208ENST00000417535 ZCCHC6Q5VYS8 1495 aaKnown RBP24.42■■□□□ 1.5
CSF2RA-208ENST00000417535 DCAF8L2P0C7V8 631 aa24.34■■□□□ 1.49
CSF2RA-208ENST00000417535 DCAF1Q9Y4B6 1507 aa24.07■■□□□ 1.44
CSF2RA-208ENST00000417535 NACADO15069 1562 aa24.02■■□□□ 1.44
CSF2RA-208ENST00000417535 MYO15BQ96JP2 1530 aa23.97■■□□□ 1.43
CSF2RA-208ENST00000417535 RB1CC1Q8TDY2 1594 aa23.96■■□□□ 1.43
CSF2RA-208ENST00000417535 SCRIBQ14160 1630 aa23.62■■□□□ 1.37
CSF2RA-208ENST00000417535 UNC13AQ9UPW8 1703 aa23.61■■□□□ 1.37
CSF2RA-208ENST00000417535 SHROOM4Q9ULL8 1493 aa23.54■■□□□ 1.36
CSF2RA-208ENST00000417535 PABPN1Q86U42 306 aaKnown RBP eCLIP23.35■■□□□ 1.33
CSF2RA-208ENST00000417535 BICRAQ9NZM4 1560 aa23.34■■□□□ 1.33
CSF2RA-208ENST00000417535 CECR2Q9BXF3 1484 aa22.81■■□□□ 1.24
CSF2RA-208ENST00000417535 EIF4G1Q04637 1599 aaKnown RBP22.64■■□□□ 1.22
CSF2RA-208ENST00000417535 MROH2BQ7Z745 1585 aa22.59■■□□□ 1.21
CSF2RA-208ENST00000417535 SMARCA4P51532 1647 aa22.58■■□□□ 1.2
CSF2RA-208ENST00000417535 BAZ1AQ9NRL2 1556 aaPredicted RBP22.56■■□□□ 1.2
CSF2RA-208ENST00000417535 DNAJC5BQ9UF47 199 aa22.48■■□□□ 1.19
CSF2RA-208ENST00000417535 RSF1Q96T23 1441 aaPredicted RBP22.47■■□□□ 1.19
CSF2RA-208ENST00000417535 CC2D2AQ9P2K1 1620 aa22.46■■□□□ 1.19
CSF2RA-208ENST00000417535 WIZO95785 1651 aa22.4■■□□□ 1.18
CSF2RA-208ENST00000417535 SUPT5HO00267 1087 aaKnown RBP22.34■■□□□ 1.17
CSF2RA-208ENST00000417535 ATAD2BQ9ULI0 1458 aa22.33■■□□□ 1.16
CSF2RA-208ENST00000417535 PEG3Q9GZU2 1588 aa22.28■■□□□ 1.16
CSF2RA-208ENST00000417535 SMARCA2P51531 1590 aa22.25■■□□□ 1.15
CSF2RA-208ENST00000417535 NCAPD3P42695 1498 aa22.19■■□□□ 1.14
CSF2RA-208ENST00000417535 BAZ1BQ9UIG0 1483 aaKnown RBP22.15■■□□□ 1.14
CSF2RA-208ENST00000417535 HMGXB3Q12766 1538 aa22.11■■□□□ 1.13
CSF2RA-208ENST00000417535 TOP2AP11388 1531 aaKnown RBP22.07■■□□□ 1.12
CSF2RA-208ENST00000417535 CCDC88BA6NC98 1476 aa21.88■■□□□ 1.09
CSF2RA-208ENST00000417535 NESP48681 1621 aa21.68■■□□□ 1.06
CSF2RA-208ENST00000417535 CADPSQ9ULU8 1353 aa21.59■■□□□ 1.05
CSF2RA-208ENST00000417535 CFTRP13569 1480 aa21.57■■□□□ 1.04
CSF2RA-208ENST00000417535 LAMC3Q9Y6N6 1575 aa21.52■■□□□ 1.04
CSF2RA-208ENST00000417535 PRDM2Q13029 1718 aa21.46■■□□□ 1.03
CSF2RA-208ENST00000417535 KIF21AQ7Z4S6 1674 aa21.41■■□□□ 1.02
CSF2RA-208ENST00000417535 FANCD2Q9BXW9 1451 aa21.37■■□□□ 1.01
CSF2RA-208ENST00000417535 PDS5BQ9NTI5 1447 aa21.34■■□□□ 1.01
CSF2RA-208ENST00000417535 ABCC8Q09428 1581 aa21.3■■□□□ 1
CSF2RA-208ENST00000417535 ERCC6Q03468 1493 aa21.29■■□□□ 1
CSF2RA-208ENST00000417535 CEP164Q9UPV0 1460 aa21.27■■□□□ 1
CSF2RA-208ENST00000417535 URB2Q14146 1524 aaKnown RBP21.17■□□□□ 0.98
CSF2RA-208ENST00000417535 THOC2Q8NI27 1593 aaKnown RBP21.16■□□□□ 0.98
CSF2RA-208ENST00000417535 CUX1P39880 1505 aa21.15■□□□□ 0.98
CSF2RA-208ENST00000417535 SYNJ1O43426 1573 aa21.13■□□□□ 0.97
CSF2RA-208ENST00000417535 MRC2Q9UBG0 1479 aa21.13■□□□□ 0.97
CSF2RA-208ENST00000417535 WRNQ14191 1432 aaPredicted RBP eCLIP21.13■□□□□ 0.97
CSF2RA-208ENST00000417535 TOPBP1Q92547 1522 aa21.09■□□□□ 0.97
CSF2RA-208ENST00000417535 CHIC1Q5VXU3 224 aa21.09■□□□□ 0.97
CSF2RA-208ENST00000417535 DNMBPQ6XZF7 1577 aa21.07■□□□□ 0.96
CSF2RA-208ENST00000417535 WDR62O43379 1518 aa21.06■□□□□ 0.96
CSF2RA-208ENST00000417535 TOP2BQ02880 1626 aa21.04■□□□□ 0.96
CSF2RA-208ENST00000417535 BIVM-ERCC5R4GMW8 1640 aa21.03■□□□□ 0.96
CSF2RA-208ENST00000417535 TRIM41Q8WV44 630 aa20.98■□□□□ 0.95
CSF2RA-208ENST00000417535 FGD5Q6ZNL6 1462 aa20.98■□□□□ 0.95
CSF2RA-208ENST00000417535 POLA1P09884 1462 aaPredicted RBP20.96■□□□□ 0.95
CSF2RA-208ENST00000417535 CUX2O14529 1486 aa20.93■□□□□ 0.94
CSF2RA-208ENST00000417535 RAD54L2Q9Y4B4 1467 aa20.92■□□□□ 0.94
CSF2RA-208ENST00000417535 SOGA1O94964 1423 aa20.86■□□□□ 0.93
CSF2RA-208ENST00000417535 TARBP1Q13395 1621 aaKnown RBP20.85■□□□□ 0.93
CSF2RA-208ENST00000417535 ZNF608Q9ULD9 1512 aaPredicted RBP20.79■□□□□ 0.92
CSF2RA-208ENST00000417535 WDR97A6NE52 1622 aa20.78■□□□□ 0.92
CSF2RA-208ENST00000417535 IFT140Q96RY7 1462 aa20.78■□□□□ 0.92
CSF2RA-208ENST00000417535 RUSC2Q8N2Y8 1516 aa20.76■□□□□ 0.91
CSF2RA-208ENST00000417535 TDRD9Q8NDG6 1382 aaKnown RBP20.75■□□□□ 0.91
CSF2RA-208ENST00000417535 ABCA10Q8WWZ4 1543 aa20.75■□□□□ 0.91
CSF2RA-208ENST00000417535 AQRO60306 1485 aaKnown RBP eCLIP20.72■□□□□ 0.91
CSF2RA-208ENST00000417535 FAM9AQ8IZU1 332 aaPredicted RBP20.68■□□□□ 0.9
CSF2RA-208ENST00000417535 EIF4G3O43432 1585 aaKnown RBP20.67■□□□□ 0.9
CSF2RA-208ENST00000417535 ABCA5Q8WWZ7 1642 aa20.66■□□□□ 0.9
CSF2RA-208ENST00000417535 GAPVD1Q14C86 1478 aa20.62■□□□□ 0.89
CSF2RA-208ENST00000417535 KIF27Q86VH2 1401 aa20.61■□□□□ 0.89
CSF2RA-208ENST00000417535 PBRM1Q86U86 1689 aa20.58■□□□□ 0.89
CSF2RA-208ENST00000417535 IGF1RP08069 1367 aa20.54■□□□□ 0.88
CSF2RA-208ENST00000417535 GRIN2BQ13224 1484 aa20.51■□□□□ 0.87
CSF2RA-208ENST00000417535 SNAPC4Q5SXM2 1469 aa20.49■□□□□ 0.87
CSF2RA-208ENST00000417535 CSRNP3Q8WYN3 585 aa20.48■□□□□ 0.87
CSF2RA-208ENST00000417535 ERICH3Q5RHP9 1530 aa20.48■□□□□ 0.87
CSF2RA-208ENST00000417535 EHMT2Q96KQ7 1210 aa20.46■□□□□ 0.87
CSF2RA-208ENST00000417535 EEA1Q15075 1411 aa20.45■□□□□ 0.86
CSF2RA-208ENST00000417535 ADAMTS12P58397 1594 aa20.42■□□□□ 0.86
CSF2RA-208ENST00000417535 CARMIL1Q5VZK9 1371 aa20.4■□□□□ 0.86
CSF2RA-208ENST00000417535 MAGI1Q96QZ7 1491 aaPredicted RBP20.39■□□□□ 0.85
CSF2RA-208ENST00000417535 CUL7Q14999 1698 aa20.38■□□□□ 0.85
CSF2RA-208ENST00000417535 PRXQ9BXM0 1461 aa20.38■□□□□ 0.85
CSF2RA-208ENST00000417535 FBLN2P98095 1184 aa20.37■□□□□ 0.85
CSF2RA-208ENST00000417535 CHD1O14646 1710 aa20.37■□□□□ 0.85
CSF2RA-208ENST00000417535 FHAD1B1AJZ9 1412 aa20.36■□□□□ 0.85
CSF2RA-208ENST00000417535 RAPGEF2Q9Y4G8 1499 aa20.35■□□□□ 0.85
CSF2RA-208ENST00000417535 SYNJ2O15056 1496 aa20.33■□□□□ 0.85
CSF2RA-208ENST00000417535 LOC105371045A0A1W2PR82 267 aa20.33■□□□□ 0.84
CSF2RA-208ENST00000417535 CHMP7Q8WUX9 453 aaPredicted RBP20.32■□□□□ 0.84
CSF2RA-208ENST00000417535 KIF21BO75037 1637 aa20.3■□□□□ 0.84
CSF2RA-208ENST00000417535 GRIN2AQ12879 1464 aa20.29■□□□□ 0.84
CSF2RA-208ENST00000417535 CEP170Q5SW79 1584 aa20.22■□□□□ 0.83
CSF2RA-208ENST00000417535 GOLGA3Q08378 1498 aa20.21■□□□□ 0.83
CSF2RA-208ENST00000417535 UBTFP17480 764 aaKnown RBP20.18■□□□□ 0.82
CSF2RA-208ENST00000417535 NUP160Q12769 1436 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms