RNA–Protein interactions for RNA: ENST00000417345.2

CNTFR-203, Transcript of ciliary neurotrophic factor receptor, humanhuman

TSL 3

Gene CNTFR, Length 921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-203ENST00000417345 NISCHQ9Y2I1 1504 aa32.87■■■□□ 2.85
CNTFR-203ENST00000417345 CCDC180Q9P1Z9 1646 aa29.23■■■□□ 2.27
CNTFR-203ENST00000417345 ABCC9O60706 1549 aa28.25■■■□□ 2.11
CNTFR-203ENST00000417345 ZCCHC6Q5VYS8 1495 aaKnown RBP27.45■■□□□ 1.99
CNTFR-203ENST00000417345 DCAF8L2P0C7V8 631 aa27.4■■□□□ 1.98
CNTFR-203ENST00000417345 NACADO15069 1562 aa27.38■■□□□ 1.97
CNTFR-203ENST00000417345 RB1CC1Q8TDY2 1594 aa27.38■■□□□ 1.97
CNTFR-203ENST00000417345 MYO15BQ96JP2 1530 aa27.26■■□□□ 1.96
CNTFR-203ENST00000417345 DCAF1Q9Y4B6 1507 aa27.24■■□□□ 1.95
CNTFR-203ENST00000417345 UNC13AQ9UPW8 1703 aa26.72■■□□□ 1.87
CNTFR-203ENST00000417345 SCRIBQ14160 1630 aa26.65■■□□□ 1.86
CNTFR-203ENST00000417345 DNAJC5BQ9UF47 199 aa26.51■■□□□ 1.83
CNTFR-203ENST00000417345 BICRAQ9NZM4 1560 aa26.4■■□□□ 1.82
CNTFR-203ENST00000417345 PABPN1Q86U42 306 aaKnown RBP eCLIP26.38■■□□□ 1.81
CNTFR-203ENST00000417345 SHROOM4Q9ULL8 1493 aa26.29■■□□□ 1.8
CNTFR-203ENST00000417345 EIF4G1Q04637 1599 aaKnown RBP25.76■■□□□ 1.71
CNTFR-203ENST00000417345 CC2D2AQ9P2K1 1620 aa25.59■■□□□ 1.69
CNTFR-203ENST00000417345 BAZ1AQ9NRL2 1556 aaPredicted RBP25.54■■□□□ 1.68
CNTFR-203ENST00000417345 CECR2Q9BXF3 1484 aa25.52■■□□□ 1.68
CNTFR-203ENST00000417345 SMARCA4P51532 1647 aa25.5■■□□□ 1.67
CNTFR-203ENST00000417345 SMARCA2P51531 1590 aa25.32■■□□□ 1.64
CNTFR-203ENST00000417345 MROH2BQ7Z745 1585 aa25.31■■□□□ 1.64
CNTFR-203ENST00000417345 ATAD2BQ9ULI0 1458 aa25.23■■□□□ 1.63
CNTFR-203ENST00000417345 PEG3Q9GZU2 1588 aa25.22■■□□□ 1.63
CNTFR-203ENST00000417345 NCAPD3P42695 1498 aa25.18■■□□□ 1.62
CNTFR-203ENST00000417345 HMGXB3Q12766 1538 aa25.16■■□□□ 1.62
CNTFR-203ENST00000417345 BAZ1BQ9UIG0 1483 aaKnown RBP25.13■■□□□ 1.61
CNTFR-203ENST00000417345 RSF1Q96T23 1441 aaPredicted RBP25.11■■□□□ 1.61
CNTFR-203ENST00000417345 WIZO95785 1651 aa25.1■■□□□ 1.61
CNTFR-203ENST00000417345 TOP2AP11388 1531 aaKnown RBP24.88■■□□□ 1.57
CNTFR-203ENST00000417345 DNAJC5Q9H3Z4 198 aa24.87■■□□□ 1.57
CNTFR-203ENST00000417345 SUPT5HO00267 1087 aaKnown RBP24.72■■□□□ 1.55
CNTFR-203ENST00000417345 LAMC3Q9Y6N6 1575 aa24.57■■□□□ 1.52
CNTFR-203ENST00000417345 CCDC88BA6NC98 1476 aa24.51■■□□□ 1.51
CNTFR-203ENST00000417345 NESP48681 1621 aa24.47■■□□□ 1.51
CNTFR-203ENST00000417345 CADPSQ9ULU8 1353 aa24.47■■□□□ 1.51
CNTFR-203ENST00000417345 ERCC6Q03468 1493 aa24.43■■□□□ 1.5
CNTFR-203ENST00000417345 PDS5BQ9NTI5 1447 aa24.39■■□□□ 1.5
CNTFR-203ENST00000417345 PRDM2Q13029 1718 aa24.38■■□□□ 1.49
CNTFR-203ENST00000417345 CFTRP13569 1480 aa24.38■■□□□ 1.49
CNTFR-203ENST00000417345 KIF21AQ7Z4S6 1674 aa24.3■■□□□ 1.48
CNTFR-203ENST00000417345 FANCD2Q9BXW9 1451 aa24.23■■□□□ 1.47
CNTFR-203ENST00000417345 CEP164Q9UPV0 1460 aa24.22■■□□□ 1.47
CNTFR-203ENST00000417345 THOC2Q8NI27 1593 aaKnown RBP24.12■■□□□ 1.45
CNTFR-203ENST00000417345 MRC2Q9UBG0 1479 aa24.11■■□□□ 1.45
CNTFR-203ENST00000417345 CUX2O14529 1486 aa24.03■■□□□ 1.44
CNTFR-203ENST00000417345 WDR62O43379 1518 aa24■■□□□ 1.43
CNTFR-203ENST00000417345 ABCC8Q09428 1581 aa23.95■■□□□ 1.42
CNTFR-203ENST00000417345 URB2Q14146 1524 aaKnown RBP23.92■■□□□ 1.42
CNTFR-203ENST00000417345 DNMBPQ6XZF7 1577 aa23.91■■□□□ 1.42
CNTFR-203ENST00000417345 TOPBP1Q92547 1522 aa23.85■■□□□ 1.41
CNTFR-203ENST00000417345 CUX1P39880 1505 aa23.74■■□□□ 1.39
CNTFR-203ENST00000417345 WRNQ14191 1432 aaPredicted RBP eCLIP23.74■■□□□ 1.39
CNTFR-203ENST00000417345 BIVM-ERCC5R4GMW8 1640 aa23.68■■□□□ 1.38
CNTFR-203ENST00000417345 IFT140Q96RY7 1462 aa23.68■■□□□ 1.38
CNTFR-203ENST00000417345 TOP2BQ02880 1626 aa23.67■■□□□ 1.38
CNTFR-203ENST00000417345 POLA1P09884 1462 aaPredicted RBP23.67■■□□□ 1.38
CNTFR-203ENST00000417345 FGD5Q6ZNL6 1462 aa23.67■■□□□ 1.38
CNTFR-203ENST00000417345 SYNJ1O43426 1573 aa23.65■■□□□ 1.38
CNTFR-203ENST00000417345 SOGA1O94964 1423 aa23.59■■□□□ 1.37
CNTFR-203ENST00000417345 TARBP1Q13395 1621 aaKnown RBP23.57■■□□□ 1.36
CNTFR-203ENST00000417345 RAD54L2Q9Y4B4 1467 aa23.52■■□□□ 1.36
CNTFR-203ENST00000417345 WDR97A6NE52 1622 aa23.51■■□□□ 1.35
CNTFR-203ENST00000417345 EIF4G3O43432 1585 aaKnown RBP23.48■■□□□ 1.35
CNTFR-203ENST00000417345 ZNF608Q9ULD9 1512 aaPredicted RBP23.46■■□□□ 1.35
CNTFR-203ENST00000417345 ABCA10Q8WWZ4 1543 aa23.44■■□□□ 1.34
CNTFR-203ENST00000417345 TRIM41Q8WV44 630 aa23.42■■□□□ 1.34
CNTFR-203ENST00000417345 TDRD9Q8NDG6 1382 aaKnown RBP23.38■■□□□ 1.33
CNTFR-203ENST00000417345 AQRO60306 1485 aaKnown RBP eCLIP23.37■■□□□ 1.33
CNTFR-203ENST00000417345 ABCA5Q8WWZ7 1642 aa23.35■■□□□ 1.33
CNTFR-203ENST00000417345 PBRM1Q86U86 1689 aa23.34■■□□□ 1.33
CNTFR-203ENST00000417345 GAPVD1Q14C86 1478 aa23.33■■□□□ 1.33
CNTFR-203ENST00000417345 GRIN2BQ13224 1484 aa23.31■■□□□ 1.32
CNTFR-203ENST00000417345 KIF27Q86VH2 1401 aa23.25■■□□□ 1.31
CNTFR-203ENST00000417345 MAGI1Q96QZ7 1491 aaPredicted RBP23.24■■□□□ 1.31
CNTFR-203ENST00000417345 SNAPC4Q5SXM2 1469 aa23.23■■□□□ 1.31
CNTFR-203ENST00000417345 ERICH3Q5RHP9 1530 aa23.21■■□□□ 1.31
CNTFR-203ENST00000417345 CHD1O14646 1710 aa23.16■■□□□ 1.3
CNTFR-203ENST00000417345 CHIC1Q5VXU3 224 aa23.15■■□□□ 1.3
CNTFR-203ENST00000417345 FBLN2P98095 1184 aa23.13■■□□□ 1.29
CNTFR-203ENST00000417345 ADAMTS12P58397 1594 aa23.13■■□□□ 1.29
CNTFR-203ENST00000417345 SYNJ2O15056 1496 aa23.12■■□□□ 1.29
CNTFR-203ENST00000417345 CUL7Q14999 1698 aa23.12■■□□□ 1.29
CNTFR-203ENST00000417345 CHMP7Q8WUX9 453 aaPredicted RBP23.1■■□□□ 1.29
CNTFR-203ENST00000417345 FHAD1B1AJZ9 1412 aa23.08■■□□□ 1.28
CNTFR-203ENST00000417345 OSCARQ8IYS5 282 aa23.05■■□□□ 1.28
CNTFR-203ENST00000417345 EEA1Q15075 1411 aa23.02■■□□□ 1.28
CNTFR-203ENST00000417345 IGF1RP08069 1367 aa23.01■■□□□ 1.27
CNTFR-203ENST00000417345 GRIN2AQ12879 1464 aa22.99■■□□□ 1.27
CNTFR-203ENST00000417345 RUSC2Q8N2Y8 1516 aa22.98■■□□□ 1.27
CNTFR-203ENST00000417345 CARMIL1Q5VZK9 1371 aa22.94■■□□□ 1.26
CNTFR-203ENST00000417345 RAPGEF2Q9Y4G8 1499 aa22.87■■□□□ 1.25
CNTFR-203ENST00000417345 CEP170Q5SW79 1584 aa22.85■■□□□ 1.25
CNTFR-203ENST00000417345 FAM9AQ8IZU1 332 aaPredicted RBP22.85■■□□□ 1.25
CNTFR-203ENST00000417345 CSRNP3Q8WYN3 585 aa22.85■■□□□ 1.25
CNTFR-203ENST00000417345 NUP160Q12769 1436 aa22.84■■□□□ 1.25
CNTFR-203ENST00000417345 CLASP1Q7Z460 1538 aa22.84■■□□□ 1.25
CNTFR-203ENST00000417345 PRXQ9BXM0 1461 aa22.79■■□□□ 1.24
CNTFR-203ENST00000417345 KIF21BO75037 1637 aa22.74■■□□□ 1.23
CNTFR-203ENST00000417345 CTTNBP2Q8WZ74 1663 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms