RNA–Protein interactions for RNA: ENST00000416739.5

PARP11-202, Transcript of poly(ADP-ribose) polymerase family member 11, humanhuman

TSL 2

Gene PARP11, Length 2,428 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP11-202ENST00000416739 NISCHQ9Y2I1 1504 aa26.01■■□□□ 1.75
PARP11-202ENST00000416739 CCDC180Q9P1Z9 1646 aa22.45■■□□□ 1.19
PARP11-202ENST00000416739 ZCCHC6Q5VYS8 1495 aaKnown RBP21.84■■□□□ 1.09
PARP11-202ENST00000416739 DCAF8L2P0C7V8 631 aa21.76■■□□□ 1.07
PARP11-202ENST00000416739 SHROOM4Q9ULL8 1493 aa21.61■■□□□ 1.05
PARP11-202ENST00000416739 ABCC9O60706 1549 aa21.48■■□□□ 1.03
PARP11-202ENST00000416739 DCAF1Q9Y4B6 1507 aa21.32■■□□□ 1
PARP11-202ENST00000416739 MYO15BQ96JP2 1530 aa20.99■□□□□ 0.95
PARP11-202ENST00000416739 SCRIBQ14160 1630 aa20.94■□□□□ 0.94
PARP11-202ENST00000416739 NACADO15069 1562 aa20.93■□□□□ 0.94
PARP11-202ENST00000416739 SUPT5HO00267 1087 aaKnown RBP20.81■□□□□ 0.92
PARP11-202ENST00000416739 RB1CC1Q8TDY2 1594 aa20.76■□□□□ 0.91
PARP11-202ENST00000416739 UNC13AQ9UPW8 1703 aa20.53■□□□□ 0.88
PARP11-202ENST00000416739 PABPN1Q86U42 306 aaKnown RBP eCLIP20.39■□□□□ 0.86
PARP11-202ENST00000416739 CECR2Q9BXF3 1484 aa20.37■□□□□ 0.85
PARP11-202ENST00000416739 RSF1Q96T23 1441 aaPredicted RBP20.29■□□□□ 0.84
PARP11-202ENST00000416739 BICRAQ9NZM4 1560 aa20.29■□□□□ 0.84
PARP11-202ENST00000416739 MROH2BQ7Z745 1585 aa20.2■□□□□ 0.82
PARP11-202ENST00000416739 WIZO95785 1651 aa20.06■□□□□ 0.8
PARP11-202ENST00000416739 BAZ1AQ9NRL2 1556 aaPredicted RBP20■□□□□ 0.79
PARP11-202ENST00000416739 SMARCA4P51532 1647 aa19.97■□□□□ 0.79
PARP11-202ENST00000416739 CHIC1Q5VXU3 224 aa19.88■□□□□ 0.77
PARP11-202ENST00000416739 TOP2AP11388 1531 aaKnown RBP19.68■□□□□ 0.74
PARP11-202ENST00000416739 ATAD2BQ9ULI0 1458 aa19.65■□□□□ 0.74
PARP11-202ENST00000416739 EIF4G1Q04637 1599 aaKnown RBP19.63■□□□□ 0.73
PARP11-202ENST00000416739 PEG3Q9GZU2 1588 aa19.62■□□□□ 0.73
PARP11-202ENST00000416739 CCDC88BA6NC98 1476 aa19.62■□□□□ 0.73
PARP11-202ENST00000416739 SMARCA2P51531 1590 aa19.58■□□□□ 0.73
PARP11-202ENST00000416739 BAZ1BQ9UIG0 1483 aaKnown RBP19.52■□□□□ 0.71
PARP11-202ENST00000416739 TRIM41Q8WV44 630 aa19.42■□□□□ 0.7
PARP11-202ENST00000416739 NCAPD3P42695 1498 aa19.39■□□□□ 0.7
PARP11-202ENST00000416739 CC2D2AQ9P2K1 1620 aa19.35■□□□□ 0.69
PARP11-202ENST00000416739 ABCC8Q09428 1581 aa19.33■□□□□ 0.68
PARP11-202ENST00000416739 HMGXB3Q12766 1538 aa19.31■□□□□ 0.68
PARP11-202ENST00000416739 LOC105371045A0A1W2PR82 267 aa19.29■□□□□ 0.68
PARP11-202ENST00000416739 FAM9AQ8IZU1 332 aaPredicted RBP19.26■□□□□ 0.67
PARP11-202ENST00000416739 DNAJC5BQ9UF47 199 aa19.2■□□□□ 0.66
PARP11-202ENST00000416739 EHMT2Q96KQ7 1210 aa19.14■□□□□ 0.65
PARP11-202ENST00000416739 WRNQ14191 1432 aaPredicted RBP eCLIP19.05■□□□□ 0.64
PARP11-202ENST00000416739 SYNJ1O43426 1573 aa19.03■□□□□ 0.64
PARP11-202ENST00000416739 CFTRP13569 1480 aa19.02■□□□□ 0.64
PARP11-202ENST00000416739 SOGA1O94964 1423 aa18.99■□□□□ 0.63
PARP11-202ENST00000416739 RUSC2Q8N2Y8 1516 aa18.97■□□□□ 0.63
PARP11-202ENST00000416739 CADPSQ9ULU8 1353 aa18.96■□□□□ 0.63
PARP11-202ENST00000416739 NESP48681 1621 aa18.94■□□□□ 0.62
PARP11-202ENST00000416739 CUX1P39880 1505 aa18.85■□□□□ 0.61
PARP11-202ENST00000416739 TOP2BQ02880 1626 aa18.84■□□□□ 0.61
PARP11-202ENST00000416739 PRDM2Q13029 1718 aa18.83■□□□□ 0.61
PARP11-202ENST00000416739 BIVM-ERCC5R4GMW8 1640 aa18.78■□□□□ 0.6
PARP11-202ENST00000416739 FANCD2Q9BXW9 1451 aa18.77■□□□□ 0.59
PARP11-202ENST00000416739 CSRNP3Q8WYN3 585 aa18.76■□□□□ 0.59
PARP11-202ENST00000416739 LAMC3Q9Y6N6 1575 aa18.67■□□□□ 0.58
PARP11-202ENST00000416739 EEA1Q15075 1411 aa18.65■□□□□ 0.58
PARP11-202ENST00000416739 FGD5Q6ZNL6 1462 aa18.62■□□□□ 0.57
PARP11-202ENST00000416739 UBTFP17480 764 aaKnown RBP18.61■□□□□ 0.57
PARP11-202ENST00000416739 KIF21AQ7Z4S6 1674 aa18.6■□□□□ 0.57
PARP11-202ENST00000416739 CEP164Q9UPV0 1460 aa18.58■□□□□ 0.57
PARP11-202ENST00000416739 TOPBP1Q92547 1522 aa18.57■□□□□ 0.56
PARP11-202ENST00000416739 URB2Q14146 1524 aaKnown RBP18.57■□□□□ 0.56
PARP11-202ENST00000416739 RAD54L2Q9Y4B4 1467 aa18.56■□□□□ 0.56
PARP11-202ENST00000416739 PDS5BQ9NTI5 1447 aa18.55■□□□□ 0.56
PARP11-202ENST00000416739 RAPGEF2Q9Y4G8 1499 aa18.55■□□□□ 0.56
PARP11-202ENST00000416739 DNMBPQ6XZF7 1577 aa18.53■□□□□ 0.56
PARP11-202ENST00000416739 CUX2O14529 1486 aa18.52■□□□□ 0.56
PARP11-202ENST00000416739 POLA1P09884 1462 aaPredicted RBP18.52■□□□□ 0.55
PARP11-202ENST00000416739 GOLGA3Q08378 1498 aa18.52■□□□□ 0.55
PARP11-202ENST00000416739 KIF27Q86VH2 1401 aa18.51■□□□□ 0.55
PARP11-202ENST00000416739 TNIKQ9UKE5 1360 aa18.5■□□□□ 0.55
PARP11-202ENST00000416739 RANGAP1P46060 587 aaPredicted RBP18.49■□□□□ 0.55
PARP11-202ENST00000416739 KIF21BO75037 1637 aa18.49■□□□□ 0.55
PARP11-202ENST00000416739 CEP162Q5TB80 1403 aa18.48■□□□□ 0.55
PARP11-202ENST00000416739 PPARGC1BQ86YN6 1023 aaKnown RBP18.47■□□□□ 0.55
PARP11-202ENST00000416739 PCGF6Q9BYE7 350 aa18.44■□□□□ 0.54
PARP11-202ENST00000416739 IGF1RP08069 1367 aa18.44■□□□□ 0.54
PARP11-202ENST00000416739 PRXQ9BXM0 1461 aa18.44■□□□□ 0.54
PARP11-202ENST00000416739 TDRD9Q8NDG6 1382 aaKnown RBP18.38■□□□□ 0.53
PARP11-202ENST00000416739 ABCA10Q8WWZ4 1543 aa18.37■□□□□ 0.53
PARP11-202ENST00000416739 CARMIL1Q5VZK9 1371 aa18.32■□□□□ 0.52
PARP11-202ENST00000416739 MRC2Q9UBG0 1479 aa18.32■□□□□ 0.52
PARP11-202ENST00000416739 ERICH3Q5RHP9 1530 aa18.32■□□□□ 0.52
PARP11-202ENST00000416739 ERCC6Q03468 1493 aa18.3■□□□□ 0.52
PARP11-202ENST00000416739 WDR97A6NE52 1622 aa18.3■□□□□ 0.52
PARP11-202ENST00000416739 CLIP1P30622 1438 aa18.3■□□□□ 0.52
PARP11-202ENST00000416739 TTBK1Q5TCY1 1321 aaPredicted RBP18.29■□□□□ 0.52
PARP11-202ENST00000416739 TARBP1Q13395 1621 aaKnown RBP18.28■□□□□ 0.52
PARP11-202ENST00000416739 AQRO60306 1485 aaKnown RBP eCLIP18.24■□□□□ 0.51
PARP11-202ENST00000416739 GAPVD1Q14C86 1478 aa18.22■□□□□ 0.51
PARP11-202ENST00000416739 TRIM26Q12899 539 aaPredicted RBP18.22■□□□□ 0.51
PARP11-202ENST00000416739 ABCA5Q8WWZ7 1642 aa18.22■□□□□ 0.51
PARP11-202ENST00000416739 WDR62O43379 1518 aa18.22■□□□□ 0.51
PARP11-202ENST00000416739 ZNF608Q9ULD9 1512 aaPredicted RBP18.2■□□□□ 0.5
PARP11-202ENST00000416739 THOC2Q8NI27 1593 aaKnown RBP18.19■□□□□ 0.5
PARP11-202ENST00000416739 ARAP1Q96P48 1450 aa18.14■□□□□ 0.49
PARP11-202ENST00000416739 ARHGAP35Q9NRY4 1499 aa18.11■□□□□ 0.49
PARP11-202ENST00000416739 VPS8Q8N3P4 1428 aa18.11■□□□□ 0.49
PARP11-202ENST00000416739 CUL7Q14999 1698 aa18.11■□□□□ 0.49
PARP11-202ENST00000416739 P3H3Q8IVL6 736 aa18.1■□□□□ 0.49
PARP11-202ENST00000416739 IFT140Q96RY7 1462 aa18.09■□□□□ 0.49
PARP11-202ENST00000416739 PBRM1Q86U86 1689 aa18.09■□□□□ 0.49
PARP11-202ENST00000416739 EIF4G3O43432 1585 aaKnown RBP18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms