RNA–Protein interactions for RNA: ENST00000416405.5

AP000552.1-204, humanhuman

TSL 5

Gene AP000552.1, Length 1,857 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000552.1-204ENST00000416405 NISCHQ9Y2I1 1504 aa33.03■■■□□ 2.88
AP000552.1-204ENST00000416405 CCDC180Q9P1Z9 1646 aa29.13■■■□□ 2.25
AP000552.1-204ENST00000416405 ABCC9O60706 1549 aa28.01■■■□□ 2.07
AP000552.1-204ENST00000416405 ZCCHC6Q5VYS8 1495 aaKnown RBP27.6■■■□□ 2.01
AP000552.1-204ENST00000416405 MYO15BQ96JP2 1530 aa27.45■■□□□ 1.98
AP000552.1-204ENST00000416405 DCAF1Q9Y4B6 1507 aa27.45■■□□□ 1.98
AP000552.1-204ENST00000416405 NACADO15069 1562 aa27.35■■□□□ 1.97
AP000552.1-204ENST00000416405 DCAF8L2P0C7V8 631 aa27.28■■□□□ 1.96
AP000552.1-204ENST00000416405 RB1CC1Q8TDY2 1594 aa27.22■■□□□ 1.95
AP000552.1-204ENST00000416405 SCRIBQ14160 1630 aa26.5■■□□□ 1.83
AP000552.1-204ENST00000416405 UNC13AQ9UPW8 1703 aa26.43■■□□□ 1.82
AP000552.1-204ENST00000416405 BICRAQ9NZM4 1560 aa26.36■■□□□ 1.81
AP000552.1-204ENST00000416405 SHROOM4Q9ULL8 1493 aa26.3■■□□□ 1.8
AP000552.1-204ENST00000416405 PABPN1Q86U42 306 aaKnown RBP eCLIP26.27■■□□□ 1.8
AP000552.1-204ENST00000416405 EIF4G1Q04637 1599 aaKnown RBP25.62■■□□□ 1.69
AP000552.1-204ENST00000416405 CECR2Q9BXF3 1484 aa25.62■■□□□ 1.69
AP000552.1-204ENST00000416405 BAZ1AQ9NRL2 1556 aaPredicted RBP25.56■■□□□ 1.68
AP000552.1-204ENST00000416405 SMARCA4P51532 1647 aa25.47■■□□□ 1.67
AP000552.1-204ENST00000416405 MROH2BQ7Z745 1585 aa25.4■■□□□ 1.66
AP000552.1-204ENST00000416405 DNAJC5BQ9UF47 199 aa25.38■■□□□ 1.65
AP000552.1-204ENST00000416405 CC2D2AQ9P2K1 1620 aa25.38■■□□□ 1.65
AP000552.1-204ENST00000416405 RSF1Q96T23 1441 aaPredicted RBP25.34■■□□□ 1.65
AP000552.1-204ENST00000416405 PEG3Q9GZU2 1588 aa25.32■■□□□ 1.64
AP000552.1-204ENST00000416405 ATAD2BQ9ULI0 1458 aa25.29■■□□□ 1.64
AP000552.1-204ENST00000416405 SMARCA2P51531 1590 aa25.28■■□□□ 1.64
AP000552.1-204ENST00000416405 NCAPD3P42695 1498 aa25.28■■□□□ 1.64
AP000552.1-204ENST00000416405 HMGXB3Q12766 1538 aa25.14■■□□□ 1.62
AP000552.1-204ENST00000416405 WIZO95785 1651 aa25.07■■□□□ 1.6
AP000552.1-204ENST00000416405 BAZ1BQ9UIG0 1483 aaKnown RBP25.06■■□□□ 1.6
AP000552.1-204ENST00000416405 TOP2AP11388 1531 aaKnown RBP24.94■■□□□ 1.58
AP000552.1-204ENST00000416405 SUPT5HO00267 1087 aaKnown RBP24.89■■□□□ 1.57
AP000552.1-204ENST00000416405 CCDC88BA6NC98 1476 aa24.65■■□□□ 1.54
AP000552.1-204ENST00000416405 CADPSQ9ULU8 1353 aa24.54■■□□□ 1.52
AP000552.1-204ENST00000416405 CFTRP13569 1480 aa24.48■■□□□ 1.51
AP000552.1-204ENST00000416405 LAMC3Q9Y6N6 1575 aa24.46■■□□□ 1.51
AP000552.1-204ENST00000416405 NESP48681 1621 aa24.36■■□□□ 1.49
AP000552.1-204ENST00000416405 PDS5BQ9NTI5 1447 aa24.34■■□□□ 1.49
AP000552.1-204ENST00000416405 FANCD2Q9BXW9 1451 aa24.19■■□□□ 1.46
AP000552.1-204ENST00000416405 PRDM2Q13029 1718 aa24.15■■□□□ 1.46
AP000552.1-204ENST00000416405 ERCC6Q03468 1493 aa24.13■■□□□ 1.45
AP000552.1-204ENST00000416405 CEP164Q9UPV0 1460 aa24.11■■□□□ 1.45
AP000552.1-204ENST00000416405 KIF21AQ7Z4S6 1674 aa24.02■■□□□ 1.44
AP000552.1-204ENST00000416405 MRC2Q9UBG0 1479 aa24.01■■□□□ 1.43
AP000552.1-204ENST00000416405 ABCC8Q09428 1581 aa23.97■■□□□ 1.43
AP000552.1-204ENST00000416405 THOC2Q8NI27 1593 aaKnown RBP23.92■■□□□ 1.42
AP000552.1-204ENST00000416405 WDR62O43379 1518 aa23.91■■□□□ 1.42
AP000552.1-204ENST00000416405 URB2Q14146 1524 aaKnown RBP23.9■■□□□ 1.42
AP000552.1-204ENST00000416405 WRNQ14191 1432 aaPredicted RBP eCLIP23.86■■□□□ 1.41
AP000552.1-204ENST00000416405 DNMBPQ6XZF7 1577 aa23.85■■□□□ 1.41
AP000552.1-204ENST00000416405 TOPBP1Q92547 1522 aa23.84■■□□□ 1.41
AP000552.1-204ENST00000416405 CUX2O14529 1486 aa23.83■■□□□ 1.41
AP000552.1-204ENST00000416405 CUX1P39880 1505 aa23.8■■□□□ 1.4
AP000552.1-204ENST00000416405 TOP2BQ02880 1626 aa23.73■■□□□ 1.39
AP000552.1-204ENST00000416405 BIVM-ERCC5R4GMW8 1640 aa23.69■■□□□ 1.38
AP000552.1-204ENST00000416405 SYNJ1O43426 1573 aa23.69■■□□□ 1.38
AP000552.1-204ENST00000416405 POLA1P09884 1462 aaPredicted RBP23.67■■□□□ 1.38
AP000552.1-204ENST00000416405 FGD5Q6ZNL6 1462 aa23.65■■□□□ 1.38
AP000552.1-204ENST00000416405 IFT140Q96RY7 1462 aa23.64■■□□□ 1.38
AP000552.1-204ENST00000416405 SOGA1O94964 1423 aa23.61■■□□□ 1.37
AP000552.1-204ENST00000416405 CHIC1Q5VXU3 224 aa23.59■■□□□ 1.37
AP000552.1-204ENST00000416405 TRIM41Q8WV44 630 aa23.58■■□□□ 1.37
AP000552.1-204ENST00000416405 TARBP1Q13395 1621 aaKnown RBP23.53■■□□□ 1.36
AP000552.1-204ENST00000416405 ABCA10Q8WWZ4 1543 aa23.52■■□□□ 1.36
AP000552.1-204ENST00000416405 RAD54L2Q9Y4B4 1467 aa23.52■■□□□ 1.36
AP000552.1-204ENST00000416405 WDR97A6NE52 1622 aa23.47■■□□□ 1.35
AP000552.1-204ENST00000416405 ZNF608Q9ULD9 1512 aaPredicted RBP23.41■■□□□ 1.34
AP000552.1-204ENST00000416405 TDRD9Q8NDG6 1382 aaKnown RBP23.39■■□□□ 1.33
AP000552.1-204ENST00000416405 KIF27Q86VH2 1401 aa23.35■■□□□ 1.33
AP000552.1-204ENST00000416405 AQRO60306 1485 aaKnown RBP eCLIP23.35■■□□□ 1.33
AP000552.1-204ENST00000416405 GAPVD1Q14C86 1478 aa23.34■■□□□ 1.33
AP000552.1-204ENST00000416405 ABCA5Q8WWZ7 1642 aa23.31■■□□□ 1.32
AP000552.1-204ENST00000416405 GRIN2BQ13224 1484 aa23.29■■□□□ 1.32
AP000552.1-204ENST00000416405 EIF4G3O43432 1585 aaKnown RBP23.29■■□□□ 1.32
AP000552.1-204ENST00000416405 EEA1Q15075 1411 aa23.26■■□□□ 1.31
AP000552.1-204ENST00000416405 ERICH3Q5RHP9 1530 aa23.24■■□□□ 1.31
AP000552.1-204ENST00000416405 IGF1RP08069 1367 aa23.24■■□□□ 1.31
AP000552.1-204ENST00000416405 MAGI1Q96QZ7 1491 aaPredicted RBP23.21■■□□□ 1.31
AP000552.1-204ENST00000416405 RUSC2Q8N2Y8 1516 aa23.16■■□□□ 1.3
AP000552.1-204ENST00000416405 SNAPC4Q5SXM2 1469 aa23.13■■□□□ 1.29
AP000552.1-204ENST00000416405 FHAD1B1AJZ9 1412 aa23.12■■□□□ 1.29
AP000552.1-204ENST00000416405 CSRNP3Q8WYN3 585 aa23.12■■□□□ 1.29
AP000552.1-204ENST00000416405 PBRM1Q86U86 1689 aa23.11■■□□□ 1.29
AP000552.1-204ENST00000416405 SYNJ2O15056 1496 aa23.09■■□□□ 1.29
AP000552.1-204ENST00000416405 CARMIL1Q5VZK9 1371 aa23.07■■□□□ 1.28
AP000552.1-204ENST00000416405 CUL7Q14999 1698 aa23.05■■□□□ 1.28
AP000552.1-204ENST00000416405 ADAMTS12P58397 1594 aa23.04■■□□□ 1.28
AP000552.1-204ENST00000416405 PRXQ9BXM0 1461 aa23.04■■□□□ 1.28
AP000552.1-204ENST00000416405 CHMP7Q8WUX9 453 aaPredicted RBP23.03■■□□□ 1.28
AP000552.1-204ENST00000416405 RAPGEF2Q9Y4G8 1499 aa22.97■■□□□ 1.27
AP000552.1-204ENST00000416405 GRIN2AQ12879 1464 aa22.97■■□□□ 1.27
AP000552.1-204ENST00000416405 FAM9AQ8IZU1 332 aaPredicted RBP22.94■■□□□ 1.26
AP000552.1-204ENST00000416405 FBLN2P98095 1184 aa22.94■■□□□ 1.26
AP000552.1-204ENST00000416405 OSCARQ8IYS5 282 aa22.94■■□□□ 1.26
AP000552.1-204ENST00000416405 NUP160Q12769 1436 aa22.9■■□□□ 1.26
AP000552.1-204ENST00000416405 KIF21BO75037 1637 aa22.87■■□□□ 1.25
AP000552.1-204ENST00000416405 CHD1O14646 1710 aa22.85■■□□□ 1.25
AP000552.1-204ENST00000416405 KIAA0586Q9BVV6 1533 aa22.79■■□□□ 1.24
AP000552.1-204ENST00000416405 GOLGA3Q08378 1498 aa22.78■■□□□ 1.24
AP000552.1-204ENST00000416405 CEP170Q5SW79 1584 aa22.77■■□□□ 1.24
AP000552.1-204ENST00000416405 CLASP1Q7Z460 1538 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms