RNA–Protein interactions for RNA: ENST00000416215.6

PTPN6-203, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 2

Gene PTPN6, Length 2,412 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-203ENST00000416215 NISCHQ9Y2I1 1504 aa29.6■■■□□ 2.33
PTPN6-203ENST00000416215 CCDC180Q9P1Z9 1646 aa25.49■■□□□ 1.67
PTPN6-203ENST00000416215 ZCCHC6Q5VYS8 1495 aaKnown RBP24.91■■□□□ 1.58
PTPN6-203ENST00000416215 SHROOM4Q9ULL8 1493 aa24.67■■□□□ 1.54
PTPN6-203ENST00000416215 DCAF8L2P0C7V8 631 aa24.64■■□□□ 1.53
PTPN6-203ENST00000416215 DCAF1Q9Y4B6 1507 aa24.34■■□□□ 1.49
PTPN6-203ENST00000416215 ABCC9O60706 1549 aa24.07■■□□□ 1.44
PTPN6-203ENST00000416215 SUPT5HO00267 1087 aaKnown RBP23.92■■□□□ 1.42
PTPN6-203ENST00000416215 MYO15BQ96JP2 1530 aa23.88■■□□□ 1.41
PTPN6-203ENST00000416215 NACADO15069 1562 aa23.71■■□□□ 1.39
PTPN6-203ENST00000416215 SCRIBQ14160 1630 aa23.71■■□□□ 1.39
PTPN6-203ENST00000416215 RB1CC1Q8TDY2 1594 aa23.45■■□□□ 1.34
PTPN6-203ENST00000416215 RSF1Q96T23 1441 aaPredicted RBP23.17■■□□□ 1.3
PTPN6-203ENST00000416215 CECR2Q9BXF3 1484 aa23.1■■□□□ 1.29
PTPN6-203ENST00000416215 UNC13AQ9UPW8 1703 aa23.07■■□□□ 1.28
PTPN6-203ENST00000416215 CHIC1Q5VXU3 224 aa23■■□□□ 1.27
PTPN6-203ENST00000416215 MROH2BQ7Z745 1585 aa22.96■■□□□ 1.27
PTPN6-203ENST00000416215 PABPN1Q86U42 306 aaKnown RBP eCLIP22.88■■□□□ 1.25
PTPN6-203ENST00000416215 BICRAQ9NZM4 1560 aa22.82■■□□□ 1.24
PTPN6-203ENST00000416215 WIZO95785 1651 aa22.8■■□□□ 1.24
PTPN6-203ENST00000416215 BAZ1AQ9NRL2 1556 aaPredicted RBP22.78■■□□□ 1.24
PTPN6-203ENST00000416215 SMARCA4P51532 1647 aa22.66■■□□□ 1.22
PTPN6-203ENST00000416215 TOP2AP11388 1531 aaKnown RBP22.45■■□□□ 1.19
PTPN6-203ENST00000416215 TRIM41Q8WV44 630 aa22.37■■□□□ 1.17
PTPN6-203ENST00000416215 CCDC88BA6NC98 1476 aa22.34■■□□□ 1.17
PTPN6-203ENST00000416215 SMARCA2P51531 1590 aa22.31■■□□□ 1.16
PTPN6-203ENST00000416215 PEG3Q9GZU2 1588 aa22.29■■□□□ 1.16
PTPN6-203ENST00000416215 LOC105371045A0A1W2PR82 267 aa22.27■■□□□ 1.16
PTPN6-203ENST00000416215 ATAD2BQ9ULI0 1458 aa22.24■■□□□ 1.15
PTPN6-203ENST00000416215 EIF4G1Q04637 1599 aaKnown RBP22.22■■□□□ 1.15
PTPN6-203ENST00000416215 BAZ1BQ9UIG0 1483 aaKnown RBP22.13■■□□□ 1.13
PTPN6-203ENST00000416215 FAM9AQ8IZU1 332 aaPredicted RBP22.11■■□□□ 1.13
PTPN6-203ENST00000416215 ABCC8Q09428 1581 aa22.04■■□□□ 1.12
PTPN6-203ENST00000416215 NCAPD3P42695 1498 aa21.94■■□□□ 1.1
PTPN6-203ENST00000416215 EHMT2Q96KQ7 1210 aa21.89■■□□□ 1.1
PTPN6-203ENST00000416215 HMGXB3Q12766 1538 aa21.88■■□□□ 1.09
PTPN6-203ENST00000416215 WRNQ14191 1432 aaPredicted RBP eCLIP21.78■■□□□ 1.08
PTPN6-203ENST00000416215 SOGA1O94964 1423 aa21.72■■□□□ 1.07
PTPN6-203ENST00000416215 CC2D2AQ9P2K1 1620 aa21.7■■□□□ 1.06
PTPN6-203ENST00000416215 SYNJ1O43426 1573 aa21.68■■□□□ 1.06
PTPN6-203ENST00000416215 RUSC2Q8N2Y8 1516 aa21.65■■□□□ 1.06
PTPN6-203ENST00000416215 PCGF6Q9BYE7 350 aa21.6■■□□□ 1.05
PTPN6-203ENST00000416215 CFTRP13569 1480 aa21.57■■□□□ 1.04
PTPN6-203ENST00000416215 CSRNP3Q8WYN3 585 aa21.57■■□□□ 1.04
PTPN6-203ENST00000416215 EEA1Q15075 1411 aa21.54■■□□□ 1.04
PTPN6-203ENST00000416215 TOP2BQ02880 1626 aa21.5■■□□□ 1.03
PTPN6-203ENST00000416215 CADPSQ9ULU8 1353 aa21.46■■□□□ 1.03
PTPN6-203ENST00000416215 BIVM-ERCC5R4GMW8 1640 aa21.44■■□□□ 1.02
PTPN6-203ENST00000416215 CUX1P39880 1505 aa21.42■■□□□ 1.02
PTPN6-203ENST00000416215 UBTFP17480 764 aaKnown RBP21.39■■□□□ 1.01
PTPN6-203ENST00000416215 TRIM26Q12899 539 aaPredicted RBP21.38■■□□□ 1.01
PTPN6-203ENST00000416215 PRDM2Q13029 1718 aa21.38■■□□□ 1.01
PTPN6-203ENST00000416215 TNIKQ9UKE5 1360 aa21.36■■□□□ 1.01
PTPN6-203ENST00000416215 GOLGA3Q08378 1498 aa21.34■■□□□ 1.01
PTPN6-203ENST00000416215 CEP162Q5TB80 1403 aa21.32■■□□□ 1
PTPN6-203ENST00000416215 DNAJC5BQ9UF47 199 aa21.3■■□□□ 1
PTPN6-203ENST00000416215 CEP164Q9UPV0 1460 aa21.29■■□□□ 1
PTPN6-203ENST00000416215 KIF21BO75037 1637 aa21.27■□□□□ 0.99
PTPN6-203ENST00000416215 PPARGC1BQ86YN6 1023 aaKnown RBP21.26■□□□□ 0.99
PTPN6-203ENST00000416215 NESP48681 1621 aa21.26■□□□□ 0.99
PTPN6-203ENST00000416215 FANCD2Q9BXW9 1451 aa21.23■□□□□ 0.99
PTPN6-203ENST00000416215 RAPGEF2Q9Y4G8 1499 aa21.22■□□□□ 0.99
PTPN6-203ENST00000416215 HRCP23327 699 aa21.17■□□□□ 0.98
PTPN6-203ENST00000416215 KIF27Q86VH2 1401 aa21.17■□□□□ 0.98
PTPN6-203ENST00000416215 FGD5Q6ZNL6 1462 aa21.13■□□□□ 0.97
PTPN6-203ENST00000416215 PRXQ9BXM0 1461 aa21.12■□□□□ 0.97
PTPN6-203ENST00000416215 LAMC3Q9Y6N6 1575 aa21.1■□□□□ 0.97
PTPN6-203ENST00000416215 CUX2O14529 1486 aa21.08■□□□□ 0.97
PTPN6-203ENST00000416215 RANGAP1P46060 587 aaPredicted RBP21.08■□□□□ 0.96
PTPN6-203ENST00000416215 CLIP1P30622 1438 aa21.06■□□□□ 0.96
PTPN6-203ENST00000416215 ERICH3Q5RHP9 1530 aa21.04■□□□□ 0.96
PTPN6-203ENST00000416215 DNMBPQ6XZF7 1577 aa21.03■□□□□ 0.96
PTPN6-203ENST00000416215 TOPBP1Q92547 1522 aa21.03■□□□□ 0.96
PTPN6-203ENST00000416215 TTBK1Q5TCY1 1321 aaPredicted RBP21.02■□□□□ 0.96
PTPN6-203ENST00000416215 IGF1RP08069 1367 aa21.01■□□□□ 0.95
PTPN6-203ENST00000416215 RAD54L2Q9Y4B4 1467 aa20.99■□□□□ 0.95
PTPN6-203ENST00000416215 PDS5BQ9NTI5 1447 aa20.98■□□□□ 0.95
PTPN6-203ENST00000416215 POLA1P09884 1462 aaPredicted RBP20.97■□□□□ 0.95
PTPN6-203ENST00000416215 URB2Q14146 1524 aaKnown RBP20.96■□□□□ 0.95
PTPN6-203ENST00000416215 KIF21AQ7Z4S6 1674 aa20.9■□□□□ 0.94
PTPN6-203ENST00000416215 VPS8Q8N3P4 1428 aa20.9■□□□□ 0.94
PTPN6-203ENST00000416215 CARMIL1Q5VZK9 1371 aa20.9■□□□□ 0.94
PTPN6-203ENST00000416215 ABCA10Q8WWZ4 1543 aa20.89■□□□□ 0.93
PTPN6-203ENST00000416215 ARAP1Q96P48 1450 aa20.8■□□□□ 0.92
PTPN6-203ENST00000416215 TDRD9Q8NDG6 1382 aaKnown RBP20.77■□□□□ 0.92
PTPN6-203ENST00000416215 APLP2Q06481 763 aa20.76■□□□□ 0.91
PTPN6-203ENST00000416215 WDR97A6NE52 1622 aa20.75■□□□□ 0.91
PTPN6-203ENST00000416215 ARHGAP35Q9NRY4 1499 aa20.74■□□□□ 0.91
PTPN6-203ENST00000416215 GAPVD1Q14C86 1478 aa20.68■□□□□ 0.9
PTPN6-203ENST00000416215 ABCA5Q8WWZ7 1642 aa20.68■□□□□ 0.9
PTPN6-203ENST00000416215 MRC2Q9UBG0 1479 aa20.67■□□□□ 0.9
PTPN6-203ENST00000416215 CUL7Q14999 1698 aa20.66■□□□□ 0.9
PTPN6-203ENST00000416215 TARBP1Q13395 1621 aaKnown RBP20.66■□□□□ 0.9
PTPN6-203ENST00000416215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.63■□□□□ 0.89
PTPN6-203ENST00000416215 ZEB1P37275 1124 aaPredicted RBP20.62■□□□□ 0.89
PTPN6-203ENST00000416215 KANK4Q5T7N3 995 aaPredicted RBP20.61■□□□□ 0.89
PTPN6-203ENST00000416215 P3H3Q8IVL6 736 aa20.6■□□□□ 0.89
PTPN6-203ENST00000416215 AQRO60306 1485 aaKnown RBP eCLIP20.57■□□□□ 0.88
PTPN6-203ENST00000416215 ERCC6Q03468 1493 aa20.53■□□□□ 0.88
PTPN6-203ENST00000416215 CCER1Q8TC90 406 aaPredicted RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms