RNA–Protein interactions for RNA: ENST00000415948.5

CRAT-203, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 5

Gene CRAT, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-203ENST00000415948 NISCHQ9Y2I1 1504 aa37.4■■■■□ 3.58
CRAT-203ENST00000415948 CCDC180Q9P1Z9 1646 aa33.13■■■□□ 2.89
CRAT-203ENST00000415948 ABCC9O60706 1549 aa32.12■■■□□ 2.73
CRAT-203ENST00000415948 ZCCHC6Q5VYS8 1495 aaKnown RBP31.27■■■□□ 2.6
CRAT-203ENST00000415948 NACADO15069 1562 aa30.98■■■□□ 2.55
CRAT-203ENST00000415948 RB1CC1Q8TDY2 1594 aa30.95■■■□□ 2.54
CRAT-203ENST00000415948 DCAF8L2P0C7V8 631 aa30.92■■■□□ 2.54
CRAT-203ENST00000415948 DCAF1Q9Y4B6 1507 aa30.9■■■□□ 2.54
CRAT-203ENST00000415948 MYO15BQ96JP2 1530 aa30.88■■■□□ 2.53
CRAT-203ENST00000415948 UNC13AQ9UPW8 1703 aa30.53■■■□□ 2.48
CRAT-203ENST00000415948 SCRIBQ14160 1630 aa30.33■■■□□ 2.45
CRAT-203ENST00000415948 BICRAQ9NZM4 1560 aa30.2■■■□□ 2.43
CRAT-203ENST00000415948 PABPN1Q86U42 306 aaKnown RBP eCLIP30.02■■■□□ 2.4
CRAT-203ENST00000415948 SHROOM4Q9ULL8 1493 aa29.76■■■□□ 2.35
CRAT-203ENST00000415948 EIF4G1Q04637 1599 aaKnown RBP29.28■■■□□ 2.28
CRAT-203ENST00000415948 DNAJC5BQ9UF47 199 aa29.26■■■□□ 2.27
CRAT-203ENST00000415948 CECR2Q9BXF3 1484 aa29.19■■■□□ 2.26
CRAT-203ENST00000415948 CC2D2AQ9P2K1 1620 aa29.1■■■□□ 2.25
CRAT-203ENST00000415948 SMARCA4P51532 1647 aa29.01■■■□□ 2.23
CRAT-203ENST00000415948 MROH2BQ7Z745 1585 aa28.91■■■□□ 2.22
CRAT-203ENST00000415948 BAZ1AQ9NRL2 1556 aaPredicted RBP28.91■■■□□ 2.22
CRAT-203ENST00000415948 ATAD2BQ9ULI0 1458 aa28.71■■■□□ 2.19
CRAT-203ENST00000415948 PEG3Q9GZU2 1588 aa28.68■■■□□ 2.18
CRAT-203ENST00000415948 WIZO95785 1651 aa28.65■■■□□ 2.18
CRAT-203ENST00000415948 SMARCA2P51531 1590 aa28.62■■■□□ 2.17
CRAT-203ENST00000415948 RSF1Q96T23 1441 aaPredicted RBP28.61■■■□□ 2.17
CRAT-203ENST00000415948 NCAPD3P42695 1498 aa28.59■■■□□ 2.17
CRAT-203ENST00000415948 HMGXB3Q12766 1538 aa28.53■■■□□ 2.16
CRAT-203ENST00000415948 BAZ1BQ9UIG0 1483 aaKnown RBP28.44■■■□□ 2.14
CRAT-203ENST00000415948 TOP2AP11388 1531 aaKnown RBP28.27■■■□□ 2.12
CRAT-203ENST00000415948 SUPT5HO00267 1087 aaKnown RBP28.01■■■□□ 2.07
CRAT-203ENST00000415948 NESP48681 1621 aa27.97■■■□□ 2.07
CRAT-203ENST00000415948 CCDC88BA6NC98 1476 aa27.93■■■□□ 2.06
CRAT-203ENST00000415948 LAMC3Q9Y6N6 1575 aa27.8■■■□□ 2.04
CRAT-203ENST00000415948 CADPSQ9ULU8 1353 aa27.74■■■□□ 2.03
CRAT-203ENST00000415948 CFTRP13569 1480 aa27.7■■■□□ 2.03
CRAT-203ENST00000415948 KIF21AQ7Z4S6 1674 aa27.68■■■□□ 2.02
CRAT-203ENST00000415948 PRDM2Q13029 1718 aa27.64■■■□□ 2.02
CRAT-203ENST00000415948 ERCC6Q03468 1493 aa27.52■■■□□ 2
CRAT-203ENST00000415948 THOC2Q8NI27 1593 aaKnown RBP27.5■■□□□ 1.99
CRAT-203ENST00000415948 PDS5BQ9NTI5 1447 aa27.49■■□□□ 1.99
CRAT-203ENST00000415948 FANCD2Q9BXW9 1451 aa27.48■■□□□ 1.99
CRAT-203ENST00000415948 CEP164Q9UPV0 1460 aa27.39■■□□□ 1.98
CRAT-203ENST00000415948 MRC2Q9UBG0 1479 aa27.31■■□□□ 1.96
CRAT-203ENST00000415948 URB2Q14146 1524 aaKnown RBP27.29■■□□□ 1.96
CRAT-203ENST00000415948 WDR62O43379 1518 aa27.27■■□□□ 1.96
CRAT-203ENST00000415948 CUX2O14529 1486 aa27.14■■□□□ 1.94
CRAT-203ENST00000415948 TOPBP1Q92547 1522 aa27.12■■□□□ 1.93
CRAT-203ENST00000415948 DNMBPQ6XZF7 1577 aa27.11■■□□□ 1.93
CRAT-203ENST00000415948 CUX1P39880 1505 aa27.11■■□□□ 1.93
CRAT-203ENST00000415948 ABCC8Q09428 1581 aa27.1■■□□□ 1.93
CRAT-203ENST00000415948 SYNJ1O43426 1573 aa27■■□□□ 1.91
CRAT-203ENST00000415948 BIVM-ERCC5R4GMW8 1640 aa26.94■■□□□ 1.9
CRAT-203ENST00000415948 POLA1P09884 1462 aaPredicted RBP26.92■■□□□ 1.9
CRAT-203ENST00000415948 FGD5Q6ZNL6 1462 aa26.9■■□□□ 1.9
CRAT-203ENST00000415948 WRNQ14191 1432 aaPredicted RBP eCLIP26.9■■□□□ 1.9
CRAT-203ENST00000415948 TOP2BQ02880 1626 aa26.89■■□□□ 1.9
CRAT-203ENST00000415948 TARBP1Q13395 1621 aaKnown RBP26.87■■□□□ 1.89
CRAT-203ENST00000415948 RAD54L2Q9Y4B4 1467 aa26.83■■□□□ 1.89
CRAT-203ENST00000415948 WDR97A6NE52 1622 aa26.8■■□□□ 1.88
CRAT-203ENST00000415948 ZNF608Q9ULD9 1512 aaPredicted RBP26.79■■□□□ 1.88
CRAT-203ENST00000415948 IFT140Q96RY7 1462 aa26.77■■□□□ 1.88
CRAT-203ENST00000415948 EIF4G3O43432 1585 aaKnown RBP26.71■■□□□ 1.87
CRAT-203ENST00000415948 SOGA1O94964 1423 aa26.7■■□□□ 1.86
CRAT-203ENST00000415948 ABCA10Q8WWZ4 1543 aa26.61■■□□□ 1.85
CRAT-203ENST00000415948 AQRO60306 1485 aaKnown RBP eCLIP26.61■■□□□ 1.85
CRAT-203ENST00000415948 ABCA5Q8WWZ7 1642 aa26.58■■□□□ 1.85
CRAT-203ENST00000415948 TDRD9Q8NDG6 1382 aaKnown RBP26.58■■□□□ 1.84
CRAT-203ENST00000415948 PBRM1Q86U86 1689 aa26.51■■□□□ 1.83
CRAT-203ENST00000415948 GAPVD1Q14C86 1478 aa26.43■■□□□ 1.82
CRAT-203ENST00000415948 SNAPC4Q5SXM2 1469 aa26.38■■□□□ 1.81
CRAT-203ENST00000415948 CHIC1Q5VXU3 224 aa26.38■■□□□ 1.81
CRAT-203ENST00000415948 GRIN2BQ13224 1484 aa26.36■■□□□ 1.81
CRAT-203ENST00000415948 RUSC2Q8N2Y8 1516 aa26.35■■□□□ 1.81
CRAT-203ENST00000415948 TRIM41Q8WV44 630 aa26.35■■□□□ 1.81
CRAT-203ENST00000415948 CHD1O14646 1710 aa26.34■■□□□ 1.81
CRAT-203ENST00000415948 ADAMTS12P58397 1594 aa26.3■■□□□ 1.8
CRAT-203ENST00000415948 ERICH3Q5RHP9 1530 aa26.27■■□□□ 1.8
CRAT-203ENST00000415948 MAGI1Q96QZ7 1491 aaPredicted RBP26.26■■□□□ 1.79
CRAT-203ENST00000415948 KIF27Q86VH2 1401 aa26.24■■□□□ 1.79
CRAT-203ENST00000415948 IGF1RP08069 1367 aa26.18■■□□□ 1.78
CRAT-203ENST00000415948 SYNJ2O15056 1496 aa26.17■■□□□ 1.78
CRAT-203ENST00000415948 CUL7Q14999 1698 aa26.12■■□□□ 1.77
CRAT-203ENST00000415948 FHAD1B1AJZ9 1412 aa26.1■■□□□ 1.77
CRAT-203ENST00000415948 GRIN2AQ12879 1464 aa26.09■■□□□ 1.77
CRAT-203ENST00000415948 CEP170Q5SW79 1584 aa26.05■■□□□ 1.76
CRAT-203ENST00000415948 FBLN2P98095 1184 aa26.05■■□□□ 1.76
CRAT-203ENST00000415948 CLASP1Q7Z460 1538 aa26.02■■□□□ 1.76
CRAT-203ENST00000415948 CHMP7Q8WUX9 453 aaPredicted RBP26■■□□□ 1.75
CRAT-203ENST00000415948 CARMIL1Q5VZK9 1371 aa25.98■■□□□ 1.75
CRAT-203ENST00000415948 NUP160Q12769 1436 aa25.97■■□□□ 1.75
CRAT-203ENST00000415948 OSCARQ8IYS5 282 aa25.95■■□□□ 1.74
CRAT-203ENST00000415948 PRXQ9BXM0 1461 aa25.94■■□□□ 1.74
CRAT-203ENST00000415948 FAM9AQ8IZU1 332 aaPredicted RBP25.92■■□□□ 1.74
CRAT-203ENST00000415948 DNAJC5Q9H3Z4 198 aa25.91■■□□□ 1.74
CRAT-203ENST00000415948 EEA1Q15075 1411 aa25.89■■□□□ 1.74
CRAT-203ENST00000415948 RAPGEF2Q9Y4G8 1499 aa25.88■■□□□ 1.73
CRAT-203ENST00000415948 CSRNP3Q8WYN3 585 aa25.84■■□□□ 1.73
CRAT-203ENST00000415948 SHROOM2Q13796 1616 aa25.81■■□□□ 1.72
CRAT-203ENST00000415948 KIF21BO75037 1637 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms