RNA–Protein interactions for RNA: ENST00000415495.5

CEACAM3-203, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

TSL 1 (best)

Gene CEACAM3, Length 1,640 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-203ENST00000415495 NISCHQ9Y2I1 1504 aa49.35■■■■■ 5.49
CEACAM3-203ENST00000415495 CCDC180Q9P1Z9 1646 aa43.12■■■■■ 4.49
CEACAM3-203ENST00000415495 ZCCHC6Q5VYS8 1495 aaKnown RBP41.39■■■■■ 4.22
CEACAM3-203ENST00000415495 ABCC9O60706 1549 aa41.04■■■■■ 4.16
CEACAM3-203ENST00000415495 DCAF1Q9Y4B6 1507 aa40.84■■■■■ 4.13
CEACAM3-203ENST00000415495 DCAF8L2P0C7V8 631 aa40.76■■■■■ 4.12
CEACAM3-203ENST00000415495 MYO15BQ96JP2 1530 aa40.47■■■■■ 4.07
CEACAM3-203ENST00000415495 NACADO15069 1562 aa40.27■■■■■ 4.04
CEACAM3-203ENST00000415495 RB1CC1Q8TDY2 1594 aa39.96■■■■□ 3.99
CEACAM3-203ENST00000415495 SHROOM4Q9ULL8 1493 aa39.95■■■■□ 3.99
CEACAM3-203ENST00000415495 SCRIBQ14160 1630 aa39.58■■■■□ 3.93
CEACAM3-203ENST00000415495 UNC13AQ9UPW8 1703 aa39.13■■■■□ 3.86
CEACAM3-203ENST00000415495 BICRAQ9NZM4 1560 aa38.82■■■■□ 3.81
CEACAM3-203ENST00000415495 PABPN1Q86U42 306 aaKnown RBP eCLIP38.67■■■■□ 3.78
CEACAM3-203ENST00000415495 CECR2Q9BXF3 1484 aa38.38■■■■□ 3.73
CEACAM3-203ENST00000415495 SUPT5HO00267 1087 aaKnown RBP38.31■■■■□ 3.72
CEACAM3-203ENST00000415495 RSF1Q96T23 1441 aaPredicted RBP38.18■■■■□ 3.7
CEACAM3-203ENST00000415495 MROH2BQ7Z745 1585 aa38.12■■■■□ 3.69
CEACAM3-203ENST00000415495 BAZ1AQ9NRL2 1556 aaPredicted RBP38.1■■■■□ 3.69
CEACAM3-203ENST00000415495 SMARCA4P51532 1647 aa37.96■■■■□ 3.67
CEACAM3-203ENST00000415495 WIZO95785 1651 aa37.75■■■■□ 3.63
CEACAM3-203ENST00000415495 EIF4G1Q04637 1599 aaKnown RBP37.63■■■■□ 3.61
CEACAM3-203ENST00000415495 PEG3Q9GZU2 1588 aa37.56■■■■□ 3.6
CEACAM3-203ENST00000415495 ATAD2BQ9ULI0 1458 aa37.46■■■■□ 3.59
CEACAM3-203ENST00000415495 SMARCA2P51531 1590 aa37.39■■■■□ 3.58
CEACAM3-203ENST00000415495 TOP2AP11388 1531 aaKnown RBP37.36■■■■□ 3.57
CEACAM3-203ENST00000415495 NCAPD3P42695 1498 aa37.21■■■■□ 3.55
CEACAM3-203ENST00000415495 BAZ1BQ9UIG0 1483 aaKnown RBP37.17■■■■□ 3.54
CEACAM3-203ENST00000415495 CC2D2AQ9P2K1 1620 aa37.14■■■■□ 3.54
CEACAM3-203ENST00000415495 HMGXB3Q12766 1538 aa37.08■■■■□ 3.53
CEACAM3-203ENST00000415495 CCDC88BA6NC98 1476 aa37■■■■□ 3.51
CEACAM3-203ENST00000415495 CHIC1Q5VXU3 224 aa36.6■■■■□ 3.45
CEACAM3-203ENST00000415495 DNAJC5BQ9UF47 199 aa36.57■■■■□ 3.44
CEACAM3-203ENST00000415495 CFTRP13569 1480 aa36.29■■■■□ 3.4
CEACAM3-203ENST00000415495 CADPSQ9ULU8 1353 aa36.22■■■■□ 3.39
CEACAM3-203ENST00000415495 ABCC8Q09428 1581 aa36.07■■■■□ 3.36
CEACAM3-203ENST00000415495 TRIM41Q8WV44 630 aa36.06■■■■□ 3.36
CEACAM3-203ENST00000415495 PRDM2Q13029 1718 aa35.98■■■■□ 3.35
CEACAM3-203ENST00000415495 NESP48681 1621 aa35.96■■■■□ 3.35
CEACAM3-203ENST00000415495 LAMC3Q9Y6N6 1575 aa35.93■■■■□ 3.34
CEACAM3-203ENST00000415495 WRNQ14191 1432 aaPredicted RBP eCLIP35.91■■■■□ 3.34
CEACAM3-203ENST00000415495 FANCD2Q9BXW9 1451 aa35.78■■■■□ 3.32
CEACAM3-203ENST00000415495 SYNJ1O43426 1573 aa35.77■■■■□ 3.32
CEACAM3-203ENST00000415495 PDS5BQ9NTI5 1447 aa35.67■■■■□ 3.3
CEACAM3-203ENST00000415495 TOP2BQ02880 1626 aa35.65■■■■□ 3.3
CEACAM3-203ENST00000415495 CUX1P39880 1505 aa35.65■■■■□ 3.3
CEACAM3-203ENST00000415495 BIVM-ERCC5R4GMW8 1640 aa35.61■■■■□ 3.29
CEACAM3-203ENST00000415495 CEP164Q9UPV0 1460 aa35.56■■■■□ 3.28
CEACAM3-203ENST00000415495 KIF21AQ7Z4S6 1674 aa35.48■■■■□ 3.27
CEACAM3-203ENST00000415495 DNMBPQ6XZF7 1577 aa35.39■■■■□ 3.26
CEACAM3-203ENST00000415495 SOGA1O94964 1423 aa35.38■■■■□ 3.25
CEACAM3-203ENST00000415495 URB2Q14146 1524 aaKnown RBP35.37■■■■□ 3.25
CEACAM3-203ENST00000415495 TOPBP1Q92547 1522 aa35.37■■■■□ 3.25
CEACAM3-203ENST00000415495 FAM9AQ8IZU1 332 aaPredicted RBP35.37■■■■□ 3.25
CEACAM3-203ENST00000415495 FGD5Q6ZNL6 1462 aa35.28■■■■□ 3.24
CEACAM3-203ENST00000415495 RUSC2Q8N2Y8 1516 aa35.28■■■■□ 3.24
CEACAM3-203ENST00000415495 EEA1Q15075 1411 aa35.24■■■■□ 3.23
CEACAM3-203ENST00000415495 MRC2Q9UBG0 1479 aa35.22■■■■□ 3.23
CEACAM3-203ENST00000415495 POLA1P09884 1462 aaPredicted RBP35.17■■■■□ 3.22
CEACAM3-203ENST00000415495 ERCC6Q03468 1493 aa35.17■■■■□ 3.22
CEACAM3-203ENST00000415495 LOC105371045A0A1W2PR82 267 aa35.17■■■■□ 3.22
CEACAM3-203ENST00000415495 CSRNP3Q8WYN3 585 aa35.11■■■■□ 3.21
CEACAM3-203ENST00000415495 RAD54L2Q9Y4B4 1467 aa35.06■■■■□ 3.2
CEACAM3-203ENST00000415495 WDR62O43379 1518 aa35.06■■■■□ 3.2
CEACAM3-203ENST00000415495 KIF27Q86VH2 1401 aa35.02■■■■□ 3.2
CEACAM3-203ENST00000415495 THOC2Q8NI27 1593 aaKnown RBP35■■■■□ 3.19
CEACAM3-203ENST00000415495 ABCA10Q8WWZ4 1543 aa34.99■■■■□ 3.19
CEACAM3-203ENST00000415495 CUX2O14529 1486 aa34.99■■■■□ 3.19
CEACAM3-203ENST00000415495 WDR97A6NE52 1622 aa34.87■■■■□ 3.17
CEACAM3-203ENST00000415495 TARBP1Q13395 1621 aaKnown RBP34.87■■■■□ 3.17
CEACAM3-203ENST00000415495 EHMT2Q96KQ7 1210 aa34.83■■■■□ 3.17
CEACAM3-203ENST00000415495 IGF1RP08069 1367 aa34.81■■■■□ 3.16
CEACAM3-203ENST00000415495 KIF21BO75037 1637 aa34.78■■■■□ 3.16
CEACAM3-203ENST00000415495 IFT140Q96RY7 1462 aa34.76■■■■□ 3.15
CEACAM3-203ENST00000415495 PRXQ9BXM0 1461 aa34.76■■■■□ 3.15
CEACAM3-203ENST00000415495 TDRD9Q8NDG6 1382 aaKnown RBP34.75■■■■□ 3.15
CEACAM3-203ENST00000415495 GOLGA3Q08378 1498 aa34.71■■■■□ 3.15
CEACAM3-203ENST00000415495 ABCA5Q8WWZ7 1642 aa34.71■■■■□ 3.15
CEACAM3-203ENST00000415495 GAPVD1Q14C86 1478 aa34.66■■■■□ 3.14
CEACAM3-203ENST00000415495 RAPGEF2Q9Y4G8 1499 aa34.66■■■■□ 3.14
CEACAM3-203ENST00000415495 ERICH3Q5RHP9 1530 aa34.62■■■■□ 3.13
CEACAM3-203ENST00000415495 TNIKQ9UKE5 1360 aa34.6■■■■□ 3.13
CEACAM3-203ENST00000415495 CARMIL1Q5VZK9 1371 aa34.59■■■■□ 3.13
CEACAM3-203ENST00000415495 ZNF608Q9ULD9 1512 aaPredicted RBP34.58■■■■□ 3.13
CEACAM3-203ENST00000415495 AQRO60306 1485 aaKnown RBP eCLIP34.58■■■■□ 3.13
CEACAM3-203ENST00000415495 UBTFP17480 764 aaKnown RBP34.56■■■■□ 3.12
CEACAM3-203ENST00000415495 CUL7Q14999 1698 aa34.47■■■■□ 3.11
CEACAM3-203ENST00000415495 GRIN2BQ13224 1484 aa34.44■■■■□ 3.1
CEACAM3-203ENST00000415495 PBRM1Q86U86 1689 aa34.43■■■■□ 3.1
CEACAM3-203ENST00000415495 EIF4G3O43432 1585 aaKnown RBP34.41■■■■□ 3.1
CEACAM3-203ENST00000415495 CEP162Q5TB80 1403 aa34.34■■■■□ 3.09
CEACAM3-203ENST00000415495 FHAD1B1AJZ9 1412 aa34.29■■■■□ 3.08
CEACAM3-203ENST00000415495 ADAMTS12P58397 1594 aa34.26■■■■□ 3.08
CEACAM3-203ENST00000415495 SNAPC4Q5SXM2 1469 aa34.22■■■■□ 3.07
CEACAM3-203ENST00000415495 MAGI1Q96QZ7 1491 aaPredicted RBP34.18■■■■□ 3.06
CEACAM3-203ENST00000415495 CLIP1P30622 1438 aa34.15■■■■□ 3.06
CEACAM3-203ENST00000415495 SYNJ2O15056 1496 aa34.05■■■■□ 3.04
CEACAM3-203ENST00000415495 RANGAP1P46060 587 aaPredicted RBP34.04■■■■□ 3.04
CEACAM3-203ENST00000415495 CTTNBP2Q8WZ74 1663 aa34.02■■■■□ 3.04
CEACAM3-203ENST00000415495 GRIN2AQ12879 1464 aa34.01■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms