RNA–Protein interactions for RNA: ENST00000415140.6

LTBP1-206, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

TSL 5

Gene LTBP1, Length 799 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-206ENST00000415140 NISCHQ9Y2I1 1504 aa25.7■■□□□ 1.7
LTBP1-206ENST00000415140 CCDC180Q9P1Z9 1646 aa22.79■■□□□ 1.24
LTBP1-206ENST00000415140 AEBP2Q6ZN18 517 aaPredicted RBP22.4■■□□□ 1.18
LTBP1-206ENST00000415140 ABCC9O60706 1549 aa22.13■■□□□ 1.13
LTBP1-206ENST00000415140 CHIC1Q5VXU3 224 aa22.05■■□□□ 1.12
LTBP1-206ENST00000415140 NACADO15069 1562 aa21.44■■□□□ 1.02
LTBP1-206ENST00000415140 ZCCHC6Q5VYS8 1495 aaKnown RBP21.42■■□□□ 1.02
LTBP1-206ENST00000415140 MYO15BQ96JP2 1530 aa21.42■■□□□ 1.02
LTBP1-206ENST00000415140 RB1CC1Q8TDY2 1594 aa21.41■■□□□ 1.02
LTBP1-206ENST00000415140 DCAF8L2P0C7V8 631 aa21.37■■□□□ 1.01
LTBP1-206ENST00000415140 DCAF1Q9Y4B6 1507 aa21.34■■□□□ 1.01
LTBP1-206ENST00000415140 UNC13AQ9UPW8 1703 aa20.84■□□□□ 0.93
LTBP1-206ENST00000415140 BICRAQ9NZM4 1560 aa20.73■□□□□ 0.91
LTBP1-206ENST00000415140 SCRIBQ14160 1630 aa20.71■□□□□ 0.91
LTBP1-206ENST00000415140 PABPN1Q86U42 306 aaKnown RBP eCLIP20.71■□□□□ 0.91
LTBP1-206ENST00000415140 SHROOM4Q9ULL8 1493 aa20.62■□□□□ 0.89
LTBP1-206ENST00000415140 DNAJC5BQ9UF47 199 aa20.26■□□□□ 0.83
LTBP1-206ENST00000415140 EIF4G1Q04637 1599 aaKnown RBP20.17■□□□□ 0.82
LTBP1-206ENST00000415140 CC2D2AQ9P2K1 1620 aa20.05■□□□□ 0.8
LTBP1-206ENST00000415140 CECR2Q9BXF3 1484 aa19.97■□□□□ 0.79
LTBP1-206ENST00000415140 BAZ1AQ9NRL2 1556 aaPredicted RBP19.91■□□□□ 0.78
LTBP1-206ENST00000415140 SMARCA4P51532 1647 aa19.88■□□□□ 0.77
LTBP1-206ENST00000415140 NCAPD3P42695 1498 aa19.8■□□□□ 0.76
LTBP1-206ENST00000415140 ATAD2BQ9ULI0 1458 aa19.79■□□□□ 0.76
LTBP1-206ENST00000415140 SMARCA2P51531 1590 aa19.78■□□□□ 0.76
LTBP1-206ENST00000415140 MROH2BQ7Z745 1585 aa19.77■□□□□ 0.76
LTBP1-206ENST00000415140 PEG3Q9GZU2 1588 aa19.75■□□□□ 0.75
LTBP1-206ENST00000415140 HMGXB3Q12766 1538 aa19.68■□□□□ 0.74
LTBP1-206ENST00000415140 RSF1Q96T23 1441 aaPredicted RBP19.62■□□□□ 0.73
LTBP1-206ENST00000415140 BAZ1BQ9UIG0 1483 aaKnown RBP19.6■□□□□ 0.73
LTBP1-206ENST00000415140 WIZO95785 1651 aa19.52■□□□□ 0.72
LTBP1-206ENST00000415140 PHF23Q9BUL5 403 aaPredicted RBP19.47■□□□□ 0.71
LTBP1-206ENST00000415140 TOP2AP11388 1531 aaKnown RBP19.37■□□□□ 0.69
LTBP1-206ENST00000415140 SENP3Q9H4L4 574 aaPredicted RBP19.36■□□□□ 0.69
LTBP1-206ENST00000415140 LAMC3Q9Y6N6 1575 aa19.23■□□□□ 0.67
LTBP1-206ENST00000415140 CADPSQ9ULU8 1353 aa19.22■□□□□ 0.67
LTBP1-206ENST00000415140 NESP48681 1621 aa19.18■□□□□ 0.66
LTBP1-206ENST00000415140 CCDC88BA6NC98 1476 aa19.16■□□□□ 0.66
LTBP1-206ENST00000415140 SUPT5HO00267 1087 aaKnown RBP19.14■□□□□ 0.65
LTBP1-206ENST00000415140 CFTRP13569 1480 aa19.12■□□□□ 0.65
LTBP1-206ENST00000415140 PDS5BQ9NTI5 1447 aa19.12■□□□□ 0.65
LTBP1-206ENST00000415140 ERCC6Q03468 1493 aa19.08■□□□□ 0.64
LTBP1-206ENST00000415140 FANCD2Q9BXW9 1451 aa18.95■□□□□ 0.62
LTBP1-206ENST00000415140 KIF21AQ7Z4S6 1674 aa18.94■□□□□ 0.62
LTBP1-206ENST00000415140 PRDM2Q13029 1718 aa18.91■□□□□ 0.62
LTBP1-206ENST00000415140 CUX2O14529 1486 aa18.91■□□□□ 0.62
LTBP1-206ENST00000415140 CEP164Q9UPV0 1460 aa18.91■□□□□ 0.62
LTBP1-206ENST00000415140 THOC2Q8NI27 1593 aaKnown RBP18.89■□□□□ 0.61
LTBP1-206ENST00000415140 MRC2Q9UBG0 1479 aa18.87■□□□□ 0.61
LTBP1-206ENST00000415140 WDR62O43379 1518 aa18.8■□□□□ 0.6
LTBP1-206ENST00000415140 ABCC8Q09428 1581 aa18.75■□□□□ 0.59
LTBP1-206ENST00000415140 URB2Q14146 1524 aaKnown RBP18.74■□□□□ 0.59
LTBP1-206ENST00000415140 TOPBP1Q92547 1522 aa18.66■□□□□ 0.58
LTBP1-206ENST00000415140 DNMBPQ6XZF7 1577 aa18.64■□□□□ 0.58
LTBP1-206ENST00000415140 CUX1P39880 1505 aa18.54■□□□□ 0.56
LTBP1-206ENST00000415140 IFT140Q96RY7 1462 aa18.54■□□□□ 0.56
LTBP1-206ENST00000415140 POLA1P09884 1462 aaPredicted RBP18.51■□□□□ 0.55
LTBP1-206ENST00000415140 WRNQ14191 1432 aaPredicted RBP eCLIP18.49■□□□□ 0.55
LTBP1-206ENST00000415140 PLPPR3Q6T4P5 718 aa18.49■□□□□ 0.55
LTBP1-206ENST00000415140 FGD5Q6ZNL6 1462 aa18.46■□□□□ 0.55
LTBP1-206ENST00000415140 SOGA1O94964 1423 aa18.46■□□□□ 0.55
LTBP1-206ENST00000415140 TARBP1Q13395 1621 aaKnown RBP18.44■□□□□ 0.54
LTBP1-206ENST00000415140 TOP2BQ02880 1626 aa18.43■□□□□ 0.54
LTBP1-206ENST00000415140 BIVM-ERCC5R4GMW8 1640 aa18.41■□□□□ 0.54
LTBP1-206ENST00000415140 RAD54L2Q9Y4B4 1467 aa18.39■□□□□ 0.54
LTBP1-206ENST00000415140 ZNF608Q9ULD9 1512 aaPredicted RBP18.39■□□□□ 0.53
LTBP1-206ENST00000415140 SYNJ1O43426 1573 aa18.38■□□□□ 0.53
LTBP1-206ENST00000415140 WDR97A6NE52 1622 aa18.37■□□□□ 0.53
LTBP1-206ENST00000415140 ABCA10Q8WWZ4 1543 aa18.33■□□□□ 0.53
LTBP1-206ENST00000415140 AQRO60306 1485 aaKnown RBP eCLIP18.33■□□□□ 0.52
LTBP1-206ENST00000415140 TDRD9Q8NDG6 1382 aaKnown RBP18.3■□□□□ 0.52
LTBP1-206ENST00000415140 EIF4G3O43432 1585 aaKnown RBP18.3■□□□□ 0.52
LTBP1-206ENST00000415140 GRIN2BQ13224 1484 aa18.23■□□□□ 0.51
LTBP1-206ENST00000415140 GAPVD1Q14C86 1478 aa18.23■□□□□ 0.51
LTBP1-206ENST00000415140 DNAJC5Q9H3Z4 198 aa18.23■□□□□ 0.51
LTBP1-206ENST00000415140 ABCA5Q8WWZ7 1642 aa18.2■□□□□ 0.5
LTBP1-206ENST00000415140 MAGI1Q96QZ7 1491 aaPredicted RBP18.18■□□□□ 0.5
LTBP1-206ENST00000415140 OSCARQ8IYS5 282 aa18.17■□□□□ 0.5
LTBP1-206ENST00000415140 TRIM41Q8WV44 630 aa18.14■□□□□ 0.49
LTBP1-206ENST00000415140 SNAPC4Q5SXM2 1469 aa18.14■□□□□ 0.49
LTBP1-206ENST00000415140 KIF27Q86VH2 1401 aa18.12■□□□□ 0.49
LTBP1-206ENST00000415140 ERICH3Q5RHP9 1530 aa18.12■□□□□ 0.49
LTBP1-206ENST00000415140 PBRM1Q86U86 1689 aa18.12■□□□□ 0.49
LTBP1-206ENST00000415140 SYNJ2O15056 1496 aa18.09■□□□□ 0.49
LTBP1-206ENST00000415140 CHMP7Q8WUX9 453 aaPredicted RBP18.09■□□□□ 0.49
LTBP1-206ENST00000415140 FBLN2P98095 1184 aa18.06■□□□□ 0.48
LTBP1-206ENST00000415140 FHAD1B1AJZ9 1412 aa18.05■□□□□ 0.48
LTBP1-206ENST00000415140 IGF1RP08069 1367 aa18.04■□□□□ 0.48
LTBP1-206ENST00000415140 CHD1O14646 1710 aa18.03■□□□□ 0.48
LTBP1-206ENST00000415140 FOXD1Q16676 465 aa18.03■□□□□ 0.48
LTBP1-206ENST00000415140 ADAMTS12P58397 1594 aa18.01■□□□□ 0.47
LTBP1-206ENST00000415140 GRIN2AQ12879 1464 aa17.97■□□□□ 0.47
LTBP1-206ENST00000415140 CUL7Q14999 1698 aa17.94■□□□□ 0.46
LTBP1-206ENST00000415140 CARMIL1Q5VZK9 1371 aa17.92■□□□□ 0.46
LTBP1-206ENST00000415140 NUP160Q12769 1436 aa17.92■□□□□ 0.46
LTBP1-206ENST00000415140 CLASP1Q7Z460 1538 aa17.91■□□□□ 0.46
LTBP1-206ENST00000415140 RUSC2Q8N2Y8 1516 aa17.91■□□□□ 0.46
LTBP1-206ENST00000415140 EEA1Q15075 1411 aa17.89■□□□□ 0.45
LTBP1-206ENST00000415140 CEP170Q5SW79 1584 aa17.84■□□□□ 0.45
LTBP1-206ENST00000415140 POTEDQ86YR6 584 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms