RNA–Protein interactions for RNA: ENST00000415023.1

ITSN1-213, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 519 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-213ENST00000415023 NISCHQ9Y2I1 1504 aa25.45■■□□□ 1.66
ITSN1-213ENST00000415023 ABCC9O60706 1549 aa23.49■■□□□ 1.35
ITSN1-213ENST00000415023 CCDC180Q9P1Z9 1646 aa23.08■■□□□ 1.28
ITSN1-213ENST00000415023 DNAJC5BQ9UF47 199 aa22.57■■□□□ 1.2
ITSN1-213ENST00000415023 RB1CC1Q8TDY2 1594 aa22.15■■□□□ 1.14
ITSN1-213ENST00000415023 NACADO15069 1562 aa21.9■■□□□ 1.1
ITSN1-213ENST00000415023 PABPN1Q86U42 306 aaKnown RBP eCLIP21.73■■□□□ 1.07
ITSN1-213ENST00000415023 UNC13AQ9UPW8 1703 aa21.72■■□□□ 1.07
ITSN1-213ENST00000415023 BICRAQ9NZM4 1560 aa21.66■■□□□ 1.06
ITSN1-213ENST00000415023 MYO15BQ96JP2 1530 aa21.52■■□□□ 1.04
ITSN1-213ENST00000415023 DCAF8L2P0C7V8 631 aa21.38■■□□□ 1.01
ITSN1-213ENST00000415023 SHROOM4Q9ULL8 1493 aa21.27■■□□□ 1
ITSN1-213ENST00000415023 CC2D2AQ9P2K1 1620 aa21.23■□□□□ 0.99
ITSN1-213ENST00000415023 CECR2Q9BXF3 1484 aa21.22■□□□□ 0.99
ITSN1-213ENST00000415023 EIF4G1Q04637 1599 aaKnown RBP21.08■□□□□ 0.97
ITSN1-213ENST00000415023 DCAF1Q9Y4B6 1507 aa21.04■□□□□ 0.96
ITSN1-213ENST00000415023 DNAJC5Q9H3Z4 198 aa21.04■□□□□ 0.96
ITSN1-213ENST00000415023 ZCCHC6Q5VYS8 1495 aaKnown RBP21.02■□□□□ 0.96
ITSN1-213ENST00000415023 SCRIBQ14160 1630 aa20.92■□□□□ 0.94
ITSN1-213ENST00000415023 CUX2O14529 1486 aa20.5■□□□□ 0.87
ITSN1-213ENST00000415023 NCAPD3P42695 1498 aa20.26■□□□□ 0.83
ITSN1-213ENST00000415023 ERCC6Q03468 1493 aa20.23■□□□□ 0.83
ITSN1-213ENST00000415023 ATAD2BQ9ULI0 1458 aa20.11■□□□□ 0.81
ITSN1-213ENST00000415023 NESP48681 1621 aa20.09■□□□□ 0.81
ITSN1-213ENST00000415023 HMGXB3Q12766 1538 aa20.07■□□□□ 0.8
ITSN1-213ENST00000415023 THOC2Q8NI27 1593 aaKnown RBP20.04■□□□□ 0.8
ITSN1-213ENST00000415023 SMARCA2P51531 1590 aa19.99■□□□□ 0.79
ITSN1-213ENST00000415023 SMARCA4P51532 1647 aa19.96■□□□□ 0.79
ITSN1-213ENST00000415023 PEG3Q9GZU2 1588 aa19.84■□□□□ 0.77
ITSN1-213ENST00000415023 LAMC3Q9Y6N6 1575 aa19.84■□□□□ 0.77
ITSN1-213ENST00000415023 BAZ1BQ9UIG0 1483 aaKnown RBP19.81■□□□□ 0.76
ITSN1-213ENST00000415023 KIF21AQ7Z4S6 1674 aa19.79■□□□□ 0.76
ITSN1-213ENST00000415023 BAZ1AQ9NRL2 1556 aaPredicted RBP19.75■□□□□ 0.75
ITSN1-213ENST00000415023 TRIM41Q8WV44 630 aa19.73■□□□□ 0.75
ITSN1-213ENST00000415023 PDS5BQ9NTI5 1447 aa19.68■□□□□ 0.74
ITSN1-213ENST00000415023 WDR62O43379 1518 aa19.62■□□□□ 0.73
ITSN1-213ENST00000415023 MROH2BQ7Z745 1585 aa19.61■□□□□ 0.73
ITSN1-213ENST00000415023 MRC2Q9UBG0 1479 aa19.6■□□□□ 0.73
ITSN1-213ENST00000415023 CADPSQ9ULU8 1353 aa19.56■□□□□ 0.72
ITSN1-213ENST00000415023 CEP164Q9UPV0 1460 aa19.39■□□□□ 0.69
ITSN1-213ENST00000415023 OSCARQ8IYS5 282 aa19.35■□□□□ 0.69
ITSN1-213ENST00000415023 FANCD2Q9BXW9 1451 aa19.34■□□□□ 0.69
ITSN1-213ENST00000415023 WIZO95785 1651 aa19.31■□□□□ 0.68
ITSN1-213ENST00000415023 CFTRP13569 1480 aa19.28■□□□□ 0.68
ITSN1-213ENST00000415023 URB2Q14146 1524 aaKnown RBP19.28■□□□□ 0.68
ITSN1-213ENST00000415023 RIMBP3CA6NJZ7 1639 aa19.28■□□□□ 0.68
ITSN1-213ENST00000415023 RIMBP3BA6NNM3 1639 aa19.28■□□□□ 0.68
ITSN1-213ENST00000415023 RIMBP3Q9UFD9 1639 aa19.28■□□□□ 0.68
ITSN1-213ENST00000415023 ARHGEF11O15085 1522 aa19.16■□□□□ 0.66
ITSN1-213ENST00000415023 ZNF608Q9ULD9 1512 aaPredicted RBP19.1■□□□□ 0.65
ITSN1-213ENST00000415023 TOP2AP11388 1531 aaKnown RBP19.05■□□□□ 0.64
ITSN1-213ENST00000415023 IFT140Q96RY7 1462 aa19.04■□□□□ 0.64
ITSN1-213ENST00000415023 PRDM2Q13029 1718 aa19.02■□□□□ 0.63
ITSN1-213ENST00000415023 RSF1Q96T23 1441 aaPredicted RBP19■□□□□ 0.63
ITSN1-213ENST00000415023 ARAP1Q96P48 1450 aa18.97■□□□□ 0.63
ITSN1-213ENST00000415023 EIF4G3O43432 1585 aaKnown RBP18.96■□□□□ 0.63
ITSN1-213ENST00000415023 TOPBP1Q92547 1522 aa18.95■□□□□ 0.62
ITSN1-213ENST00000415023 CYB5RLQ6IPT4 315 aa18.91■□□□□ 0.62
ITSN1-213ENST00000415023 CHD1O14646 1710 aa18.9■□□□□ 0.62
ITSN1-213ENST00000415023 TARBP1Q13395 1621 aaKnown RBP18.87■□□□□ 0.61
ITSN1-213ENST00000415023 CCDC88BA6NC98 1476 aa18.83■□□□□ 0.6
ITSN1-213ENST00000415023 DNMBPQ6XZF7 1577 aa18.82■□□□□ 0.6
ITSN1-213ENST00000415023 AQRO60306 1485 aaKnown RBP eCLIP18.81■□□□□ 0.6
ITSN1-213ENST00000415023 ABCC8Q09428 1581 aa18.8■□□□□ 0.6
ITSN1-213ENST00000415023 TRHP20396 242 aaPredicted RBP18.77■□□□□ 0.6
ITSN1-213ENST00000415023 CLASP1Q7Z460 1538 aa18.74■□□□□ 0.59
ITSN1-213ENST00000415023 POLA1P09884 1462 aaPredicted RBP18.72■□□□□ 0.59
ITSN1-213ENST00000415023 RAD54L2Q9Y4B4 1467 aa18.64■□□□□ 0.57
ITSN1-213ENST00000415023 SNAPC4Q5SXM2 1469 aa18.61■□□□□ 0.57
ITSN1-213ENST00000415023 WDR97A6NE52 1622 aa18.6■□□□□ 0.57
ITSN1-213ENST00000415023 FBLN2P98095 1184 aa18.6■□□□□ 0.57
ITSN1-213ENST00000415023 TDRD9Q8NDG6 1382 aaKnown RBP18.59■□□□□ 0.57
ITSN1-213ENST00000415023 SYNJ1O43426 1573 aa18.57■□□□□ 0.56
ITSN1-213ENST00000415023 MAGI1Q96QZ7 1491 aaPredicted RBP18.56■□□□□ 0.56
ITSN1-213ENST00000415023 AEBP2Q6ZN18 517 aaPredicted RBP18.55■□□□□ 0.56
ITSN1-213ENST00000415023 SOGA1O94964 1423 aa18.55■□□□□ 0.56
ITSN1-213ENST00000415023 FGD5Q6ZNL6 1462 aa18.51■□□□□ 0.55
ITSN1-213ENST00000415023 SYNJ2O15056 1496 aa18.5■□□□□ 0.55
ITSN1-213ENST00000415023 GAPVD1Q14C86 1478 aa18.49■□□□□ 0.55
ITSN1-213ENST00000415023 GRIN2BQ13224 1484 aa18.48■□□□□ 0.55
ITSN1-213ENST00000415023 CUX1P39880 1505 aa18.45■□□□□ 0.54
ITSN1-213ENST00000415023 CHMP7Q8WUX9 453 aaPredicted RBP18.43■□□□□ 0.54
ITSN1-213ENST00000415023 ERCC6L2Q5T890 1561 aa18.4■□□□□ 0.54
ITSN1-213ENST00000415023 PBRM1Q86U86 1689 aa18.38■□□□□ 0.53
ITSN1-213ENST00000415023 ABCA5Q8WWZ7 1642 aa18.35■□□□□ 0.53
ITSN1-213ENST00000415023 ABCA10Q8WWZ4 1543 aa18.3■□□□□ 0.52
ITSN1-213ENST00000415023 CEP170Q5SW79 1584 aa18.29■□□□□ 0.52
ITSN1-213ENST00000415023 SHROOM2Q13796 1616 aa18.28■□□□□ 0.52
ITSN1-213ENST00000415023 NUP160Q12769 1436 aa18.28■□□□□ 0.52
ITSN1-213ENST00000415023 KIF13AQ9H1H9 1805 aa18.28■□□□□ 0.52
ITSN1-213ENST00000415023 GRIN2AQ12879 1464 aa18.27■□□□□ 0.52
ITSN1-213ENST00000415023 ADAMTS12P58397 1594 aa18.23■□□□□ 0.51
ITSN1-213ENST00000415023 SUPT5HO00267 1087 aaKnown RBP18.19■□□□□ 0.5
ITSN1-213ENST00000415023 FHAD1B1AJZ9 1412 aa18.1■□□□□ 0.49
ITSN1-213ENST00000415023 ABCC10Q5T3U5 1492 aa18.09■□□□□ 0.49
ITSN1-213ENST00000415023 MAPKBP1O60336 1514 aa18.07■□□□□ 0.48
ITSN1-213ENST00000415023 DIP2BQ9P265 1576 aa18.06■□□□□ 0.48
ITSN1-213ENST00000415023 KDM4FA0A1W2PPD8 638 aa18.05■□□□□ 0.48
ITSN1-213ENST00000415023 WRNQ14191 1432 aaPredicted RBP eCLIP18.05■□□□□ 0.48
ITSN1-213ENST00000415023 PRG4Q92954 1404 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms