RNA–Protein interactions for RNA: ENST00000414507.1

PMS2P4-202, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 4, humanhuman

TSL 3

Gene PMS2P4, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P4-202ENST00000414507 NISCHQ9Y2I1 1504 aa20.09■□□□□ 0.81
PMS2P4-202ENST00000414507 AEBP2Q6ZN18 517 aaPredicted RBP18.04■□□□□ 0.48
PMS2P4-202ENST00000414507 CCDC180Q9P1Z9 1646 aa17.83■□□□□ 0.45
PMS2P4-202ENST00000414507 ABCC9O60706 1549 aa17.23■□□□□ 0.35
PMS2P4-202ENST00000414507 CHIC1Q5VXU3 224 aa16.88■□□□□ 0.29
PMS2P4-202ENST00000414507 ZCCHC6Q5VYS8 1495 aaKnown RBP16.79■□□□□ 0.28
PMS2P4-202ENST00000414507 NACADO15069 1562 aa16.67■□□□□ 0.26
PMS2P4-202ENST00000414507 RB1CC1Q8TDY2 1594 aa16.65■□□□□ 0.26
PMS2P4-202ENST00000414507 DCAF1Q9Y4B6 1507 aa16.63■□□□□ 0.25
PMS2P4-202ENST00000414507 MYO15BQ96JP2 1530 aa16.62■□□□□ 0.25
PMS2P4-202ENST00000414507 DCAF8L2P0C7V8 631 aa16.61■□□□□ 0.25
PMS2P4-202ENST00000414507 UNC13AQ9UPW8 1703 aa16.4■□□□□ 0.22
PMS2P4-202ENST00000414507 SCRIBQ14160 1630 aa16.27■□□□□ 0.2
PMS2P4-202ENST00000414507 BICRAQ9NZM4 1560 aa16.2■□□□□ 0.18
PMS2P4-202ENST00000414507 PABPN1Q86U42 306 aaKnown RBP eCLIP16.09■□□□□ 0.17
PMS2P4-202ENST00000414507 SHROOM4Q9ULL8 1493 aa15.97■□□□□ 0.15
PMS2P4-202ENST00000414507 EIF4G1Q04637 1599 aaKnown RBP15.72■□□□□ 0.11
PMS2P4-202ENST00000414507 DNAJC5BQ9UF47 199 aa15.65■□□□□ 0.1
PMS2P4-202ENST00000414507 CECR2Q9BXF3 1484 aa15.64■□□□□ 0.09
PMS2P4-202ENST00000414507 CC2D2AQ9P2K1 1620 aa15.62■□□□□ 0.09
PMS2P4-202ENST00000414507 SMARCA4P51532 1647 aa15.58■□□□□ 0.09
PMS2P4-202ENST00000414507 SENP3Q9H4L4 574 aaPredicted RBP15.57■□□□□ 0.08
PMS2P4-202ENST00000414507 BAZ1AQ9NRL2 1556 aaPredicted RBP15.55■□□□□ 0.08
PMS2P4-202ENST00000414507 MROH2BQ7Z745 1585 aa15.5■□□□□ 0.07
PMS2P4-202ENST00000414507 PEG3Q9GZU2 1588 aa15.42■□□□□ 0.06
PMS2P4-202ENST00000414507 ATAD2BQ9ULI0 1458 aa15.41■□□□□ 0.06
PMS2P4-202ENST00000414507 SMARCA2P51531 1590 aa15.4■□□□□ 0.06
PMS2P4-202ENST00000414507 WIZO95785 1651 aa15.37■□□□□ 0.05
PMS2P4-202ENST00000414507 NCAPD3P42695 1498 aa15.36■□□□□ 0.05
PMS2P4-202ENST00000414507 RSF1Q96T23 1441 aaPredicted RBP15.35■□□□□ 0.05
PMS2P4-202ENST00000414507 HMGXB3Q12766 1538 aa15.33■□□□□ 0.05
PMS2P4-202ENST00000414507 BAZ1BQ9UIG0 1483 aaKnown RBP15.29■□□□□ 0.04
PMS2P4-202ENST00000414507 PHF23Q9BUL5 403 aaPredicted RBP15.22■□□□□ 0.03
PMS2P4-202ENST00000414507 TOP2AP11388 1531 aaKnown RBP15.19■□□□□ 0.02
PMS2P4-202ENST00000414507 POTEDQ86YR6 584 aa15.07■□□□□ 0
PMS2P4-202ENST00000414507 SUPT5HO00267 1087 aaKnown RBP15.04■□□□□ -0
PMS2P4-202ENST00000414507 CCDC88BA6NC98 1476 aa14.99□□□□□ -0.01
PMS2P4-202ENST00000414507 NESP48681 1621 aa14.99□□□□□ -0.01
PMS2P4-202ENST00000414507 LAMC3Q9Y6N6 1575 aa14.96□□□□□ -0.01
PMS2P4-202ENST00000414507 CADPSQ9ULU8 1353 aa14.9□□□□□ -0.02
PMS2P4-202ENST00000414507 PRDM2Q13029 1718 aa14.89□□□□□ -0.03
PMS2P4-202ENST00000414507 CFTRP13569 1480 aa14.88□□□□□ -0.03
PMS2P4-202ENST00000414507 KIF21AQ7Z4S6 1674 aa14.87□□□□□ -0.03
PMS2P4-202ENST00000414507 ERCC6Q03468 1493 aa14.8□□□□□ -0.04
PMS2P4-202ENST00000414507 PDS5BQ9NTI5 1447 aa14.79□□□□□ -0.04
PMS2P4-202ENST00000414507 FANCD2Q9BXW9 1451 aa14.76□□□□□ -0.05
PMS2P4-202ENST00000414507 THOC2Q8NI27 1593 aaKnown RBP14.76□□□□□ -0.05
PMS2P4-202ENST00000414507 CEP164Q9UPV0 1460 aa14.73□□□□□ -0.05
PMS2P4-202ENST00000414507 MRC2Q9UBG0 1479 aa14.68□□□□□ -0.06
PMS2P4-202ENST00000414507 WDR62O43379 1518 aa14.64□□□□□ -0.07
PMS2P4-202ENST00000414507 URB2Q14146 1524 aaKnown RBP14.64□□□□□ -0.07
PMS2P4-202ENST00000414507 CUX2O14529 1486 aa14.59□□□□□ -0.07
PMS2P4-202ENST00000414507 DNMBPQ6XZF7 1577 aa14.57□□□□□ -0.08
PMS2P4-202ENST00000414507 FOXD1Q16676 465 aa14.57□□□□□ -0.08
PMS2P4-202ENST00000414507 TOPBP1Q92547 1522 aa14.56□□□□□ -0.08
PMS2P4-202ENST00000414507 CUX1P39880 1505 aa14.54□□□□□ -0.08
PMS2P4-202ENST00000414507 ABCC8Q09428 1581 aa14.53□□□□□ -0.08
PMS2P4-202ENST00000414507 SYNJ1O43426 1573 aa14.48□□□□□ -0.09
PMS2P4-202ENST00000414507 BIVM-ERCC5R4GMW8 1640 aa14.48□□□□□ -0.09
PMS2P4-202ENST00000414507 WRNQ14191 1432 aaPredicted RBP eCLIP14.46□□□□□ -0.09
PMS2P4-202ENST00000414507 TOP2BQ02880 1626 aa14.45□□□□□ -0.1
PMS2P4-202ENST00000414507 POLA1P09884 1462 aaPredicted RBP14.44□□□□□ -0.1
PMS2P4-202ENST00000414507 FGD5Q6ZNL6 1462 aa14.44□□□□□ -0.1
PMS2P4-202ENST00000414507 TARBP1Q13395 1621 aaKnown RBP14.43□□□□□ -0.1
PMS2P4-202ENST00000414507 IFT140Q96RY7 1462 aa14.4□□□□□ -0.1
PMS2P4-202ENST00000414507 WDR97A6NE52 1622 aa14.39□□□□□ -0.11
PMS2P4-202ENST00000414507 RAD54L2Q9Y4B4 1467 aa14.38□□□□□ -0.11
PMS2P4-202ENST00000414507 DNAJC5Q9H3Z4 198 aa14.37□□□□□ -0.11
PMS2P4-202ENST00000414507 ZNF608Q9ULD9 1512 aaPredicted RBP14.36□□□□□ -0.11
PMS2P4-202ENST00000414507 SOGA1O94964 1423 aa14.35□□□□□ -0.11
PMS2P4-202ENST00000414507 EIF4G3O43432 1585 aaKnown RBP14.34□□□□□ -0.11
PMS2P4-202ENST00000414507 ABCA10Q8WWZ4 1543 aa14.3□□□□□ -0.12
PMS2P4-202ENST00000414507 ABCA5Q8WWZ7 1642 aa14.27□□□□□ -0.12
PMS2P4-202ENST00000414507 AQRO60306 1485 aaKnown RBP eCLIP14.26□□□□□ -0.132e-8■■■■■ 35.8
PMS2P4-202ENST00000414507 TDRD9Q8NDG6 1382 aaKnown RBP14.26□□□□□ -0.13
PMS2P4-202ENST00000414507 PBRM1Q86U86 1689 aa14.26□□□□□ -0.13
PMS2P4-202ENST00000414507 GAPVD1Q14C86 1478 aa14.2□□□□□ -0.14
PMS2P4-202ENST00000414507 TRIM41Q8WV44 630 aa14.18□□□□□ -0.14
PMS2P4-202ENST00000414507 GRIN2BQ13224 1484 aa14.18□□□□□ -0.14
PMS2P4-202ENST00000414507 CHD1O14646 1710 aa14.16□□□□□ -0.14
PMS2P4-202ENST00000414507 SNAPC4Q5SXM2 1469 aa14.16□□□□□ -0.14
PMS2P4-202ENST00000414507 MAGI1Q96QZ7 1491 aaPredicted RBP14.13□□□□□ -0.15
PMS2P4-202ENST00000414507 ERICH3Q5RHP9 1530 aa14.13□□□□□ -0.15
PMS2P4-202ENST00000414507 KIF27Q86VH2 1401 aa14.12□□□□□ -0.15
PMS2P4-202ENST00000414507 ADAMTS12P58397 1594 aa14.12□□□□□ -0.15
PMS2P4-202ENST00000414507 RUSC2Q8N2Y8 1516 aa14.11□□□□□ -0.15
PMS2P4-202ENST00000414507 SYNJ2O15056 1496 aa14.07□□□□□ -0.16
PMS2P4-202ENST00000414507 CUL7Q14999 1698 aa14.07□□□□□ -0.16
PMS2P4-202ENST00000414507 IGF1RP08069 1367 aa14.05□□□□□ -0.16
PMS2P4-202ENST00000414507 FHAD1B1AJZ9 1412 aa14.04□□□□□ -0.16
PMS2P4-202ENST00000414507 MSH5O43196 834 aa14.02□□□□□ -0.17
PMS2P4-202ENST00000414507 GRIN2AQ12879 1464 aa14.01□□□□□ -0.17
PMS2P4-202ENST00000414507 FBLN2P98095 1184 aa14□□□□□ -0.17
PMS2P4-202ENST00000414507 CHMP7Q8WUX9 453 aaPredicted RBP13.99□□□□□ -0.17
PMS2P4-202ENST00000414507 CEP170Q5SW79 1584 aa13.97□□□□□ -0.17
PMS2P4-202ENST00000414507 CLASP1Q7Z460 1538 aa13.97□□□□□ -0.17
PMS2P4-202ENST00000414507 EEA1Q15075 1411 aa13.97□□□□□ -0.17
PMS2P4-202ENST00000414507 CARMIL1Q5VZK9 1371 aa13.96□□□□□ -0.17
PMS2P4-202ENST00000414507 OSCARQ8IYS5 282 aa13.96□□□□□ -0.17
PMS2P4-202ENST00000414507 NUP160Q12769 1436 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms