RNA–Protein interactions for RNA: ENST00000413437.1

CSTF2-202, Transcript of cleavage stimulation factor subunit 2, humanhuman

TSL 5

Gene CSTF2, Length 757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-202ENST00000413437 NISCHQ9Y2I1 1504 aa18.68■□□□□ 0.58
CSTF2-202ENST00000413437 CCDC180Q9P1Z9 1646 aa16.51■□□□□ 0.23
CSTF2-202ENST00000413437 ABCC9O60706 1549 aa16.21■□□□□ 0.19
CSTF2-202ENST00000413437 DCAF8L2P0C7V8 631 aa15.66■□□□□ 0.1
CSTF2-202ENST00000413437 ZCCHC6Q5VYS8 1495 aaKnown RBP15.56■□□□□ 0.08
CSTF2-202ENST00000413437 RB1CC1Q8TDY2 1594 aa15.52■□□□□ 0.07
CSTF2-202ENST00000413437 NACADO15069 1562 aa15.51■□□□□ 0.07
CSTF2-202ENST00000413437 MYO15BQ96JP2 1530 aa15.4■□□□□ 0.06
CSTF2-202ENST00000413437 DCAF1Q9Y4B6 1507 aa15.38■□□□□ 0.05
CSTF2-202ENST00000413437 UNC13AQ9UPW8 1703 aa15.25■□□□□ 0.03
CSTF2-202ENST00000413437 PABPN1Q86U42 306 aaKnown RBP eCLIP15.21■□□□□ 0.03
CSTF2-202ENST00000413437 SCRIBQ14160 1630 aa15.17■□□□□ 0.02
CSTF2-202ENST00000413437 BICRAQ9NZM4 1560 aa15.14■□□□□ 0.01
CSTF2-202ENST00000413437 DNAJC5BQ9UF47 199 aa14.92□□□□□ -0.02
CSTF2-202ENST00000413437 SHROOM4Q9ULL8 1493 aa14.91□□□□□ -0.02
CSTF2-202ENST00000413437 EIF4G1Q04637 1599 aaKnown RBP14.68□□□□□ -0.06
CSTF2-202ENST00000413437 CC2D2AQ9P2K1 1620 aa14.63□□□□□ -0.07
CSTF2-202ENST00000413437 CECR2Q9BXF3 1484 aa14.63□□□□□ -0.07
CSTF2-202ENST00000413437 SMARCA4P51532 1647 aa14.48□□□□□ -0.09
CSTF2-202ENST00000413437 MROH2BQ7Z745 1585 aa14.45□□□□□ -0.1
CSTF2-202ENST00000413437 BAZ1AQ9NRL2 1556 aaPredicted RBP14.43□□□□□ -0.1
CSTF2-202ENST00000413437 ATAD2BQ9ULI0 1458 aa14.39□□□□□ -0.11
CSTF2-202ENST00000413437 NCAPD3P42695 1498 aa14.34□□□□□ -0.11
CSTF2-202ENST00000413437 SMARCA2P51531 1590 aa14.31□□□□□ -0.12
CSTF2-202ENST00000413437 WIZO95785 1651 aa14.3□□□□□ -0.12
CSTF2-202ENST00000413437 RSF1Q96T23 1441 aaPredicted RBP14.29□□□□□ -0.12
CSTF2-202ENST00000413437 PEG3Q9GZU2 1588 aa14.29□□□□□ -0.12
CSTF2-202ENST00000413437 HMGXB3Q12766 1538 aa14.25□□□□□ -0.13
CSTF2-202ENST00000413437 BAZ1BQ9UIG0 1483 aaKnown RBP14.25□□□□□ -0.13
CSTF2-202ENST00000413437 NESP48681 1621 aa14.08□□□□□ -0.15
CSTF2-202ENST00000413437 TOP2AP11388 1531 aaKnown RBP14.08□□□□□ -0.16
CSTF2-202ENST00000413437 SUPT5HO00267 1087 aaKnown RBP14.04□□□□□ -0.16
CSTF2-202ENST00000413437 CCDC88BA6NC98 1476 aa13.98□□□□□ -0.17
CSTF2-202ENST00000413437 CADPSQ9ULU8 1353 aa13.94□□□□□ -0.18
CSTF2-202ENST00000413437 LAMC3Q9Y6N6 1575 aa13.92□□□□□ -0.18
CSTF2-202ENST00000413437 ERCC6Q03468 1493 aa13.89□□□□□ -0.19
CSTF2-202ENST00000413437 KIF21AQ7Z4S6 1674 aa13.87□□□□□ -0.19
CSTF2-202ENST00000413437 CFTRP13569 1480 aa13.87□□□□□ -0.19
CSTF2-202ENST00000413437 PDS5BQ9NTI5 1447 aa13.82□□□□□ -0.2
CSTF2-202ENST00000413437 FANCD2Q9BXW9 1451 aa13.79□□□□□ -0.2
CSTF2-202ENST00000413437 THOC2Q8NI27 1593 aaKnown RBP13.78□□□□□ -0.2
CSTF2-202ENST00000413437 AEBP2Q6ZN18 517 aaPredicted RBP13.75□□□□□ -0.21
CSTF2-202ENST00000413437 CEP164Q9UPV0 1460 aa13.74□□□□□ -0.21
CSTF2-202ENST00000413437 PRDM2Q13029 1718 aa13.73□□□□□ -0.21
CSTF2-202ENST00000413437 CHIC1Q5VXU3 224 aa13.73□□□□□ -0.21
CSTF2-202ENST00000413437 MRC2Q9UBG0 1479 aa13.72□□□□□ -0.21
CSTF2-202ENST00000413437 URB2Q14146 1524 aaKnown RBP13.69□□□□□ -0.22
CSTF2-202ENST00000413437 CUX2O14529 1486 aa13.68□□□□□ -0.22
CSTF2-202ENST00000413437 WDR62O43379 1518 aa13.66□□□□□ -0.22
CSTF2-202ENST00000413437 TOPBP1Q92547 1522 aa13.59□□□□□ -0.23
CSTF2-202ENST00000413437 DNMBPQ6XZF7 1577 aa13.54□□□□□ -0.24
CSTF2-202ENST00000413437 CUX1P39880 1505 aa13.54□□□□□ -0.24
CSTF2-202ENST00000413437 ABCC8Q09428 1581 aa13.52□□□□□ -0.25
CSTF2-202ENST00000413437 POLA1P09884 1462 aaPredicted RBP13.48□□□□□ -0.25
CSTF2-202ENST00000413437 RAD54L2Q9Y4B4 1467 aa13.48□□□□□ -0.25
CSTF2-202ENST00000413437 ZNF608Q9ULD9 1512 aaPredicted RBP13.47□□□□□ -0.25
CSTF2-202ENST00000413437 FGD5Q6ZNL6 1462 aa13.47□□□□□ -0.25
CSTF2-202ENST00000413437 SYNJ1O43426 1573 aa13.45□□□□□ -0.26
CSTF2-202ENST00000413437 IFT140Q96RY7 1462 aa13.43□□□□□ -0.26
CSTF2-202ENST00000413437 TARBP1Q13395 1621 aaKnown RBP13.43□□□□□ -0.26
CSTF2-202ENST00000413437 SOGA1O94964 1423 aa13.43□□□□□ -0.26
CSTF2-202ENST00000413437 WRNQ14191 1432 aaPredicted RBP eCLIP13.43□□□□□ -0.26
CSTF2-202ENST00000413437 AQRO60306 1485 aaKnown RBP eCLIP13.4□□□□□ -0.26
CSTF2-202ENST00000413437 TDRD9Q8NDG6 1382 aaKnown RBP13.39□□□□□ -0.27
CSTF2-202ENST00000413437 TOP2BQ02880 1626 aa13.39□□□□□ -0.27
CSTF2-202ENST00000413437 BIVM-ERCC5R4GMW8 1640 aa13.39□□□□□ -0.27
CSTF2-202ENST00000413437 EIF4G3O43432 1585 aaKnown RBP13.36□□□□□ -0.27
CSTF2-202ENST00000413437 WDR97A6NE52 1622 aa13.33□□□□□ -0.28
CSTF2-202ENST00000413437 ABCA10Q8WWZ4 1543 aa13.29□□□□□ -0.28
CSTF2-202ENST00000413437 DNAJC5Q9H3Z4 198 aa13.27□□□□□ -0.29
CSTF2-202ENST00000413437 ABCA5Q8WWZ7 1642 aa13.25□□□□□ -0.29
CSTF2-202ENST00000413437 GAPVD1Q14C86 1478 aa13.25□□□□□ -0.29
CSTF2-202ENST00000413437 SNAPC4Q5SXM2 1469 aa13.23□□□□□ -0.29
CSTF2-202ENST00000413437 GRIN2BQ13224 1484 aa13.23□□□□□ -0.29
CSTF2-202ENST00000413437 PBRM1Q86U86 1689 aa13.22□□□□□ -0.29
CSTF2-202ENST00000413437 FBLN2P98095 1184 aa13.21□□□□□ -0.29
CSTF2-202ENST00000413437 CHD1O14646 1710 aa13.2□□□□□ -0.3
CSTF2-202ENST00000413437 TRIM41Q8WV44 630 aa13.19□□□□□ -0.3
CSTF2-202ENST00000413437 OSCARQ8IYS5 282 aa13.18□□□□□ -0.3
CSTF2-202ENST00000413437 RUSC2Q8N2Y8 1516 aa13.18□□□□□ -0.3
CSTF2-202ENST00000413437 MAGI1Q96QZ7 1491 aaPredicted RBP13.16□□□□□ -0.3
CSTF2-202ENST00000413437 CHMP7Q8WUX9 453 aaPredicted RBP13.14□□□□□ -0.31
CSTF2-202ENST00000413437 SYNJ2O15056 1496 aa13.13□□□□□ -0.31
CSTF2-202ENST00000413437 IGF1RP08069 1367 aa13.12□□□□□ -0.31
CSTF2-202ENST00000413437 ERICH3Q5RHP9 1530 aa13.12□□□□□ -0.31
CSTF2-202ENST00000413437 KIF27Q86VH2 1401 aa13.12□□□□□ -0.31
CSTF2-202ENST00000413437 ADAMTS12P58397 1594 aa13.11□□□□□ -0.31
CSTF2-202ENST00000413437 FHAD1B1AJZ9 1412 aa13.08□□□□□ -0.32
CSTF2-202ENST00000413437 GRIN2AQ12879 1464 aa13.07□□□□□ -0.32
CSTF2-202ENST00000413437 CEP170Q5SW79 1584 aa13.04□□□□□ -0.32
CSTF2-202ENST00000413437 CLASP1Q7Z460 1538 aa13.03□□□□□ -0.32
CSTF2-202ENST00000413437 CARMIL1Q5VZK9 1371 aa13.03□□□□□ -0.32
CSTF2-202ENST00000413437 FAM9AQ8IZU1 332 aaPredicted RBP13.01□□□□□ -0.33
CSTF2-202ENST00000413437 CUL7Q14999 1698 aa13□□□□□ -0.33
CSTF2-202ENST00000413437 NUP160Q12769 1436 aa13□□□□□ -0.33
CSTF2-202ENST00000413437 RIMBP3CA6NJZ7 1639 aa12.99□□□□□ -0.33
CSTF2-202ENST00000413437 RIMBP3BA6NNM3 1639 aa12.99□□□□□ -0.33
CSTF2-202ENST00000413437 RIMBP3Q9UFD9 1639 aa12.99□□□□□ -0.33
CSTF2-202ENST00000413437 ARHGEF11O15085 1522 aa12.98□□□□□ -0.33
CSTF2-202ENST00000413437 ERCC6L2Q5T890 1561 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms