RNA–Protein interactions for RNA: ENST00000413288.1

FAM238B-201, Transcript of family with sequence similarity 238 member B, humanhuman

TSL 3

Gene FAM238B, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM238B-201ENST00000413288 NISCHQ9Y2I1 1504 aa22.67■■□□□ 1.22
FAM238B-201ENST00000413288 AEBP2Q6ZN18 517 aaPredicted RBP20.67■□□□□ 0.9
FAM238B-201ENST00000413288 CHIC1Q5VXU3 224 aa20.24■□□□□ 0.83
FAM238B-201ENST00000413288 CCDC180Q9P1Z9 1646 aa19.86■□□□□ 0.77
FAM238B-201ENST00000413288 ZCCHC6Q5VYS8 1495 aaKnown RBP19.03■□□□□ 0.64
FAM238B-201ENST00000413288 ABCC9O60706 1549 aa18.81■□□□□ 0.6
FAM238B-201ENST00000413288 DCAF8L2P0C7V8 631 aa18.78■□□□□ 0.6
FAM238B-201ENST00000413288 DCAF1Q9Y4B6 1507 aa18.69■□□□□ 0.58
FAM238B-201ENST00000413288 SHROOM4Q9ULL8 1493 aa18.54■□□□□ 0.56
FAM238B-201ENST00000413288 MYO15BQ96JP2 1530 aa18.47■□□□□ 0.55
FAM238B-201ENST00000413288 NACADO15069 1562 aa18.44■□□□□ 0.54
FAM238B-201ENST00000413288 RB1CC1Q8TDY2 1594 aa18.33■□□□□ 0.52
FAM238B-201ENST00000413288 SCRIBQ14160 1630 aa18.29■□□□□ 0.52
FAM238B-201ENST00000413288 UNC13AQ9UPW8 1703 aa18.12■□□□□ 0.49
FAM238B-201ENST00000413288 BICRAQ9NZM4 1560 aa17.79■□□□□ 0.44
FAM238B-201ENST00000413288 SUPT5HO00267 1087 aaKnown RBP17.78■□□□□ 0.44
FAM238B-201ENST00000413288 PHF23Q9BUL5 403 aaPredicted RBP17.78■□□□□ 0.44
FAM238B-201ENST00000413288 PABPN1Q86U42 306 aaKnown RBP eCLIP17.7■□□□□ 0.42
FAM238B-201ENST00000413288 CECR2Q9BXF3 1484 aa17.65■□□□□ 0.42
FAM238B-201ENST00000413288 SENP3Q9H4L4 574 aaPredicted RBP17.56■□□□□ 0.4
FAM238B-201ENST00000413288 RSF1Q96T23 1441 aaPredicted RBP17.55■□□□□ 0.4
FAM238B-201ENST00000413288 MROH2BQ7Z745 1585 aa17.54■□□□□ 0.4
FAM238B-201ENST00000413288 BAZ1AQ9NRL2 1556 aaPredicted RBP17.52■□□□□ 0.39
FAM238B-201ENST00000413288 SMARCA4P51532 1647 aa17.49■□□□□ 0.39
FAM238B-201ENST00000413288 WIZO95785 1651 aa17.47■□□□□ 0.39
FAM238B-201ENST00000413288 EIF4G1Q04637 1599 aaKnown RBP17.24■□□□□ 0.35
FAM238B-201ENST00000413288 TOP2AP11388 1531 aaKnown RBP17.21■□□□□ 0.35
FAM238B-201ENST00000413288 PEG3Q9GZU2 1588 aa17.21■□□□□ 0.35
FAM238B-201ENST00000413288 SMARCA2P51531 1590 aa17.15■□□□□ 0.34
FAM238B-201ENST00000413288 ATAD2BQ9ULI0 1458 aa17.15■□□□□ 0.34
FAM238B-201ENST00000413288 BAZ1BQ9UIG0 1483 aaKnown RBP17.08■□□□□ 0.32
FAM238B-201ENST00000413288 CC2D2AQ9P2K1 1620 aa17.04■□□□□ 0.32
FAM238B-201ENST00000413288 CCDC88BA6NC98 1476 aa17.03■□□□□ 0.32
FAM238B-201ENST00000413288 DNAJC5BQ9UF47 199 aa17.01■□□□□ 0.31
FAM238B-201ENST00000413288 HMGXB3Q12766 1538 aa16.99■□□□□ 0.31
FAM238B-201ENST00000413288 NCAPD3P42695 1498 aa16.97■□□□□ 0.31
FAM238B-201ENST00000413288 ABCC8Q09428 1581 aa16.72■□□□□ 0.27
FAM238B-201ENST00000413288 PRDM2Q13029 1718 aa16.7■□□□□ 0.26
FAM238B-201ENST00000413288 TRIM41Q8WV44 630 aa16.68■□□□□ 0.26
FAM238B-201ENST00000413288 CFTRP13569 1480 aa16.6■□□□□ 0.25
FAM238B-201ENST00000413288 CADPSQ9ULU8 1353 aa16.54■□□□□ 0.24
FAM238B-201ENST00000413288 SYNJ1O43426 1573 aa16.54■□□□□ 0.24
FAM238B-201ENST00000413288 WRNQ14191 1432 aaPredicted RBP eCLIP16.53■□□□□ 0.24
FAM238B-201ENST00000413288 NESP48681 1621 aa16.51■□□□□ 0.23
FAM238B-201ENST00000413288 LAMC3Q9Y6N6 1575 aa16.47■□□□□ 0.23
FAM238B-201ENST00000413288 BIVM-ERCC5R4GMW8 1640 aa16.47■□□□□ 0.23
FAM238B-201ENST00000413288 FAM9AQ8IZU1 332 aaPredicted RBP16.45■□□□□ 0.22
FAM238B-201ENST00000413288 TOP2BQ02880 1626 aa16.45■□□□□ 0.22
FAM238B-201ENST00000413288 PLPPR3Q6T4P5 718 aa16.43■□□□□ 0.22
FAM238B-201ENST00000413288 FANCD2Q9BXW9 1451 aa16.41■□□□□ 0.22
FAM238B-201ENST00000413288 CUX1P39880 1505 aa16.4■□□□□ 0.22
FAM238B-201ENST00000413288 KIF21AQ7Z4S6 1674 aa16.4■□□□□ 0.22
FAM238B-201ENST00000413288 LOC105371045A0A1W2PR82 267 aa16.34■□□□□ 0.21
FAM238B-201ENST00000413288 SOGA1O94964 1423 aa16.33■□□□□ 0.2
FAM238B-201ENST00000413288 RUSC2Q8N2Y8 1516 aa16.31■□□□□ 0.2
FAM238B-201ENST00000413288 CEP164Q9UPV0 1460 aa16.31■□□□□ 0.2
FAM238B-201ENST00000413288 PDS5BQ9NTI5 1447 aa16.29■□□□□ 0.2
FAM238B-201ENST00000413288 DNMBPQ6XZF7 1577 aa16.28■□□□□ 0.2
FAM238B-201ENST00000413288 FOXD1Q16676 465 aa16.27■□□□□ 0.2
FAM238B-201ENST00000413288 EHMT2Q96KQ7 1210 aa16.27■□□□□ 0.2
FAM238B-201ENST00000413288 TOPBP1Q92547 1522 aa16.24■□□□□ 0.19
FAM238B-201ENST00000413288 EEA1Q15075 1411 aa16.24■□□□□ 0.19
FAM238B-201ENST00000413288 FGD5Q6ZNL6 1462 aa16.23■□□□□ 0.19
FAM238B-201ENST00000413288 URB2Q14146 1524 aaKnown RBP16.22■□□□□ 0.19
FAM238B-201ENST00000413288 CSRNP3Q8WYN3 585 aa16.17■□□□□ 0.18
FAM238B-201ENST00000413288 POLA1P09884 1462 aaPredicted RBP16.15■□□□□ 0.18
FAM238B-201ENST00000413288 MRC2Q9UBG0 1479 aa16.13■□□□□ 0.17
FAM238B-201ENST00000413288 RAD54L2Q9Y4B4 1467 aa16.12■□□□□ 0.17
FAM238B-201ENST00000413288 WDR97A6NE52 1622 aa16.12■□□□□ 0.17
FAM238B-201ENST00000413288 CUX2O14529 1486 aa16.11■□□□□ 0.17
FAM238B-201ENST00000413288 ERCC6Q03468 1493 aa16.11■□□□□ 0.17
FAM238B-201ENST00000413288 KIF21BO75037 1637 aa16.11■□□□□ 0.17
FAM238B-201ENST00000413288 KIF27Q86VH2 1401 aa16.11■□□□□ 0.17
FAM238B-201ENST00000413288 GOLGA3Q08378 1498 aa16.07■□□□□ 0.16
FAM238B-201ENST00000413288 THOC2Q8NI27 1593 aaKnown RBP16.07■□□□□ 0.16
FAM238B-201ENST00000413288 WDR62O43379 1518 aa16.05■□□□□ 0.16
FAM238B-201ENST00000413288 ABCA10Q8WWZ4 1543 aa16.05■□□□□ 0.16
FAM238B-201ENST00000413288 TARBP1Q13395 1621 aaKnown RBP16.02■□□□□ 0.16
FAM238B-201ENST00000413288 RAPGEF2Q9Y4G8 1499 aa16.01■□□□□ 0.15
FAM238B-201ENST00000413288 UBTFP17480 764 aaKnown RBP16■□□□□ 0.15
FAM238B-201ENST00000413288 ABCA5Q8WWZ7 1642 aa15.99■□□□□ 0.15
FAM238B-201ENST00000413288 PRXQ9BXM0 1461 aa15.98■□□□□ 0.15
FAM238B-201ENST00000413288 ERICH3Q5RHP9 1530 aa15.98■□□□□ 0.15
FAM238B-201ENST00000413288 TNIKQ9UKE5 1360 aa15.97■□□□□ 0.15
FAM238B-201ENST00000413288 PBRM1Q86U86 1689 aa15.96■□□□□ 0.15
FAM238B-201ENST00000413288 IGF1RP08069 1367 aa15.95■□□□□ 0.14
FAM238B-201ENST00000413288 TDRD9Q8NDG6 1382 aaKnown RBP15.94■□□□□ 0.14
FAM238B-201ENST00000413288 CUL7Q14999 1698 aa15.92■□□□□ 0.14
FAM238B-201ENST00000413288 CEP162Q5TB80 1403 aa15.91■□□□□ 0.14
FAM238B-201ENST00000413288 GAPVD1Q14C86 1478 aa15.91■□□□□ 0.14
FAM238B-201ENST00000413288 IFT140Q96RY7 1462 aa15.91■□□□□ 0.14
FAM238B-201ENST00000413288 CARMIL1Q5VZK9 1371 aa15.89■□□□□ 0.13
FAM238B-201ENST00000413288 ZNF608Q9ULD9 1512 aaPredicted RBP15.86■□□□□ 0.13
FAM238B-201ENST00000413288 AQRO60306 1485 aaKnown RBP eCLIP15.85■□□□□ 0.13
FAM238B-201ENST00000413288 EIF4G3O43432 1585 aaKnown RBP15.85■□□□□ 0.13
FAM238B-201ENST00000413288 CTTNBP2Q8WZ74 1663 aa15.83■□□□□ 0.12
FAM238B-201ENST00000413288 RANGAP1P46060 587 aaPredicted RBP15.82■□□□□ 0.12
FAM238B-201ENST00000413288 CLIP1P30622 1438 aa15.79■□□□□ 0.12
FAM238B-201ENST00000413288 ADAMTS12P58397 1594 aa15.79■□□□□ 0.12
FAM238B-201ENST00000413288 GRIN2BQ13224 1484 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms