RNA–Protein interactions for RNA: ENST00000413253.1

CACNA1B-207, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

TSL 5

Gene CACNA1B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-207ENST00000413253 NISCHQ9Y2I1 1504 aa34.36■■■■□ 3.09
CACNA1B-207ENST00000413253 ABCC9O60706 1549 aa31.82■■■□□ 2.68
CACNA1B-207ENST00000413253 CCDC180Q9P1Z9 1646 aa31.14■■■□□ 2.58
CACNA1B-207ENST00000413253 DNAJC5BQ9UF47 199 aa30.49■■■□□ 2.47
CACNA1B-207ENST00000413253 RB1CC1Q8TDY2 1594 aa29.94■■■□□ 2.38
CACNA1B-207ENST00000413253 NACADO15069 1562 aa29.57■■■□□ 2.32
CACNA1B-207ENST00000413253 PABPN1Q86U42 306 aaKnown RBP eCLIP29.5■■■□□ 2.31
CACNA1B-207ENST00000413253 UNC13AQ9UPW8 1703 aa29.37■■■□□ 2.29
CACNA1B-207ENST00000413253 DCAF8L2P0C7V8 631 aa29.22■■■□□ 2.27
CACNA1B-207ENST00000413253 BICRAQ9NZM4 1560 aa29.18■■■□□ 2.26
CACNA1B-207ENST00000413253 MYO15BQ96JP2 1530 aa28.93■■■□□ 2.22
CACNA1B-207ENST00000413253 CC2D2AQ9P2K1 1620 aa28.72■■■□□ 2.19
CACNA1B-207ENST00000413253 CECR2Q9BXF3 1484 aa28.72■■■□□ 2.19
CACNA1B-207ENST00000413253 SHROOM4Q9ULL8 1493 aa28.62■■■□□ 2.17
CACNA1B-207ENST00000413253 EIF4G1Q04637 1599 aaKnown RBP28.49■■■□□ 2.15
CACNA1B-207ENST00000413253 DNAJC5Q9H3Z4 198 aa28.42■■■□□ 2.14
CACNA1B-207ENST00000413253 SCRIBQ14160 1630 aa28.36■■■□□ 2.13
CACNA1B-207ENST00000413253 ZCCHC6Q5VYS8 1495 aaKnown RBP28.35■■■□□ 2.13
CACNA1B-207ENST00000413253 DCAF1Q9Y4B6 1507 aa28.32■■■□□ 2.12
CACNA1B-207ENST00000413253 CUX2O14529 1486 aa27.67■■■□□ 2.02
CACNA1B-207ENST00000413253 ERCC6Q03468 1493 aa27.48■■□□□ 1.99
CACNA1B-207ENST00000413253 NCAPD3P42695 1498 aa27.32■■□□□ 1.96
CACNA1B-207ENST00000413253 NESP48681 1621 aa27.17■■□□□ 1.94
CACNA1B-207ENST00000413253 ATAD2BQ9ULI0 1458 aa27.16■■□□□ 1.94
CACNA1B-207ENST00000413253 HMGXB3Q12766 1538 aa27.06■■□□□ 1.92
CACNA1B-207ENST00000413253 THOC2Q8NI27 1593 aaKnown RBP27.05■■□□□ 1.92
CACNA1B-207ENST00000413253 SMARCA2P51531 1590 aa27.01■■□□□ 1.92
CACNA1B-207ENST00000413253 SMARCA4P51532 1647 aa26.98■■□□□ 1.91
CACNA1B-207ENST00000413253 TRIM41Q8WV44 630 aa26.9■■□□□ 1.9
CACNA1B-207ENST00000413253 BAZ1BQ9UIG0 1483 aaKnown RBP26.83■■□□□ 1.89
CACNA1B-207ENST00000413253 LAMC3Q9Y6N6 1575 aa26.81■■□□□ 1.88
CACNA1B-207ENST00000413253 KIF21AQ7Z4S6 1674 aa26.81■■□□□ 1.88
CACNA1B-207ENST00000413253 PEG3Q9GZU2 1588 aa26.71■■□□□ 1.87
CACNA1B-207ENST00000413253 BAZ1AQ9NRL2 1556 aaPredicted RBP26.7■■□□□ 1.86
CACNA1B-207ENST00000413253 PDS5BQ9NTI5 1447 aa26.64■■□□□ 1.85
CACNA1B-207ENST00000413253 MROH2BQ7Z745 1585 aa26.5■■□□□ 1.83
CACNA1B-207ENST00000413253 MRC2Q9UBG0 1479 aa26.49■■□□□ 1.83
CACNA1B-207ENST00000413253 WDR62O43379 1518 aa26.49■■□□□ 1.83
CACNA1B-207ENST00000413253 CADPSQ9ULU8 1353 aa26.44■■□□□ 1.82
CACNA1B-207ENST00000413253 CEP164Q9UPV0 1460 aa26.25■■□□□ 1.79
CACNA1B-207ENST00000413253 OSCARQ8IYS5 282 aa26.23■■□□□ 1.79
CACNA1B-207ENST00000413253 FANCD2Q9BXW9 1451 aa26.17■■□□□ 1.78
CACNA1B-207ENST00000413253 WIZO95785 1651 aa26.16■■□□□ 1.78
CACNA1B-207ENST00000413253 RIMBP3CA6NJZ7 1639 aa26.08■■□□□ 1.77
CACNA1B-207ENST00000413253 RIMBP3BA6NNM3 1639 aa26.08■■□□□ 1.77
CACNA1B-207ENST00000413253 RIMBP3Q9UFD9 1639 aa26.08■■□□□ 1.77
CACNA1B-207ENST00000413253 URB2Q14146 1524 aaKnown RBP26.04■■□□□ 1.76
CACNA1B-207ENST00000413253 CFTRP13569 1480 aa26.02■■□□□ 1.76
CACNA1B-207ENST00000413253 ARHGEF11O15085 1522 aa25.92■■□□□ 1.74
CACNA1B-207ENST00000413253 ZNF608Q9ULD9 1512 aaPredicted RBP25.83■■□□□ 1.73
CACNA1B-207ENST00000413253 TOP2AP11388 1531 aaKnown RBP25.75■■□□□ 1.71
CACNA1B-207ENST00000413253 IFT140Q96RY7 1462 aa25.73■■□□□ 1.71
CACNA1B-207ENST00000413253 PRDM2Q13029 1718 aa25.73■■□□□ 1.71
CACNA1B-207ENST00000413253 CYB5RLQ6IPT4 315 aa25.7■■□□□ 1.7
CACNA1B-207ENST00000413253 RSF1Q96T23 1441 aaPredicted RBP25.67■■□□□ 1.7
CACNA1B-207ENST00000413253 EIF4G3O43432 1585 aaKnown RBP25.65■■□□□ 1.7
CACNA1B-207ENST00000413253 ARAP1Q96P48 1450 aa25.63■■□□□ 1.69
CACNA1B-207ENST00000413253 TRHP20396 242 aaPredicted RBP25.61■■□□□ 1.69
CACNA1B-207ENST00000413253 TOPBP1Q92547 1522 aa25.61■■□□□ 1.69
CACNA1B-207ENST00000413253 CHD1O14646 1710 aa25.6■■□□□ 1.69
CACNA1B-207ENST00000413253 AQRO60306 1485 aaKnown RBP eCLIP25.47■■□□□ 1.67
CACNA1B-207ENST00000413253 CCDC88BA6NC98 1476 aa25.47■■□□□ 1.67
CACNA1B-207ENST00000413253 TARBP1Q13395 1621 aaKnown RBP25.46■■□□□ 1.67
CACNA1B-207ENST00000413253 DNMBPQ6XZF7 1577 aa25.44■■□□□ 1.66
CACNA1B-207ENST00000413253 ABCC8Q09428 1581 aa25.42■■□□□ 1.66
CACNA1B-207ENST00000413253 FBLN2P98095 1184 aa25.38■■□□□ 1.65
CACNA1B-207ENST00000413253 AEBP2Q6ZN18 517 aaPredicted RBP25.34■■□□□ 1.65
CACNA1B-207ENST00000413253 POLA1P09884 1462 aaPredicted RBP25.31■■□□□ 1.64
CACNA1B-207ENST00000413253 CLASP1Q7Z460 1538 aa25.28■■□□□ 1.64
CACNA1B-207ENST00000413253 RAD54L2Q9Y4B4 1467 aa25.24■■□□□ 1.63
CACNA1B-207ENST00000413253 SNAPC4Q5SXM2 1469 aa25.21■■□□□ 1.63
CACNA1B-207ENST00000413253 TDRD9Q8NDG6 1382 aaKnown RBP25.19■■□□□ 1.62
CACNA1B-207ENST00000413253 SYNJ1O43426 1573 aa25.14■■□□□ 1.62
CACNA1B-207ENST00000413253 SOGA1O94964 1423 aa25.12■■□□□ 1.61
CACNA1B-207ENST00000413253 WDR97A6NE52 1622 aa25.09■■□□□ 1.61
CACNA1B-207ENST00000413253 MAGI1Q96QZ7 1491 aaPredicted RBP25.08■■□□□ 1.6
CACNA1B-207ENST00000413253 CHMP7Q8WUX9 453 aaPredicted RBP25.07■■□□□ 1.6
CACNA1B-207ENST00000413253 FGD5Q6ZNL6 1462 aa25.05■■□□□ 1.6
CACNA1B-207ENST00000413253 GAPVD1Q14C86 1478 aa25.02■■□□□ 1.6
CACNA1B-207ENST00000413253 SYNJ2O15056 1496 aa25.01■■□□□ 1.59
CACNA1B-207ENST00000413253 GRIN2BQ13224 1484 aa25■■□□□ 1.59
CACNA1B-207ENST00000413253 CUX1P39880 1505 aa24.94■■□□□ 1.58
CACNA1B-207ENST00000413253 PBRM1Q86U86 1689 aa24.91■■□□□ 1.58
CACNA1B-207ENST00000413253 ERCC6L2Q5T890 1561 aa24.88■■□□□ 1.57
CACNA1B-207ENST00000413253 ABCA5Q8WWZ7 1642 aa24.78■■□□□ 1.56
CACNA1B-207ENST00000413253 KIF13AQ9H1H9 1805 aa24.72■■□□□ 1.55
CACNA1B-207ENST00000413253 CEP170Q5SW79 1584 aa24.72■■□□□ 1.55
CACNA1B-207ENST00000413253 ABCA10Q8WWZ4 1543 aa24.71■■□□□ 1.55
CACNA1B-207ENST00000413253 GRIN2AQ12879 1464 aa24.7■■□□□ 1.55
CACNA1B-207ENST00000413253 NUP160Q12769 1436 aa24.65■■□□□ 1.54
CACNA1B-207ENST00000413253 SHROOM2Q13796 1616 aa24.64■■□□□ 1.54
CACNA1B-207ENST00000413253 ADAMTS12P58397 1594 aa24.63■■□□□ 1.53
CACNA1B-207ENST00000413253 FHAD1B1AJZ9 1412 aa24.47■■□□□ 1.51
CACNA1B-207ENST00000413253 ABCC10Q5T3U5 1492 aa24.45■■□□□ 1.5
CACNA1B-207ENST00000413253 PRG4Q92954 1404 aaPredicted RBP24.44■■□□□ 1.5
CACNA1B-207ENST00000413253 WRNQ14191 1432 aaPredicted RBP eCLIP24.44■■□□□ 1.5
CACNA1B-207ENST00000413253 KDM4FA0A1W2PPD8 638 aa24.42■■□□□ 1.5
CACNA1B-207ENST00000413253 FAM69CQ0P6D2 419 aa24.42■■□□□ 1.5
CACNA1B-207ENST00000413253 DIP2BQ9P265 1576 aa24.42■■□□□ 1.5
CACNA1B-207ENST00000413253 MAPKBP1O60336 1514 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms