RNA–Protein interactions for RNA: ENST00000413233.1

TPM3P1-201, Transcript of tropomyosin 3 pseudogene 1, humanhuman

BASIC

Gene TPM3P1, Length 747 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P1-201ENST00000413233 NISCHQ9Y2I1 1504 aa22.76■■□□□ 1.23
TPM3P1-201ENST00000413233 AEBP2Q6ZN18 517 aaPredicted RBP22.3■■□□□ 1.16
TPM3P1-201ENST00000413233 CHIC1Q5VXU3 224 aa21.11■□□□□ 0.97
TPM3P1-201ENST00000413233 ABCC9O60706 1549 aa20.32■□□□□ 0.84
TPM3P1-201ENST00000413233 CCDC180Q9P1Z9 1646 aa20.12■□□□□ 0.81
TPM3P1-201ENST00000413233 DNAJC5BQ9UF47 199 aa19.43■□□□□ 0.7
TPM3P1-201ENST00000413233 RB1CC1Q8TDY2 1594 aa19.15■□□□□ 0.66
TPM3P1-201ENST00000413233 ZCCHC6Q5VYS8 1495 aaKnown RBP19.05■□□□□ 0.64
TPM3P1-201ENST00000413233 SENP3Q9H4L4 574 aaPredicted RBP19.04■□□□□ 0.64
TPM3P1-201ENST00000413233 MYO15BQ96JP2 1530 aa19■□□□□ 0.63
TPM3P1-201ENST00000413233 DCAF1Q9Y4B6 1507 aa19■□□□□ 0.63
TPM3P1-201ENST00000413233 NACADO15069 1562 aa18.89■□□□□ 0.62
TPM3P1-201ENST00000413233 UNC13AQ9UPW8 1703 aa18.82■□□□□ 0.6
TPM3P1-201ENST00000413233 PABPN1Q86U42 306 aaKnown RBP eCLIP18.81■□□□□ 0.6
TPM3P1-201ENST00000413233 PHF23Q9BUL5 403 aaPredicted RBP18.78■□□□□ 0.6
TPM3P1-201ENST00000413233 DCAF8L2P0C7V8 631 aa18.66■□□□□ 0.58
TPM3P1-201ENST00000413233 BICRAQ9NZM4 1560 aa18.63■□□□□ 0.57
TPM3P1-201ENST00000413233 CC2D2AQ9P2K1 1620 aa18.37■□□□□ 0.53
TPM3P1-201ENST00000413233 CECR2Q9BXF3 1484 aa18.35■□□□□ 0.53
TPM3P1-201ENST00000413233 SHROOM4Q9ULL8 1493 aa18.28■□□□□ 0.52
TPM3P1-201ENST00000413233 EIF4G1Q04637 1599 aaKnown RBP18.21■□□□□ 0.51
TPM3P1-201ENST00000413233 SCRIBQ14160 1630 aa18.18■□□□□ 0.5
TPM3P1-201ENST00000413233 DNAJC5Q9H3Z4 198 aa18.16■□□□□ 0.5
TPM3P1-201ENST00000413233 FOXD1Q16676 465 aa17.75■□□□□ 0.43
TPM3P1-201ENST00000413233 CUX2O14529 1486 aa17.69■□□□□ 0.42
TPM3P1-201ENST00000413233 BAZ1AQ9NRL2 1556 aaPredicted RBP17.66■□□□□ 0.42
TPM3P1-201ENST00000413233 ERCC6Q03468 1493 aa17.58■□□□□ 0.41
TPM3P1-201ENST00000413233 SMARCA4P51532 1647 aa17.54■□□□□ 0.4
TPM3P1-201ENST00000413233 PEG3Q9GZU2 1588 aa17.49■□□□□ 0.39
TPM3P1-201ENST00000413233 MROH2BQ7Z745 1585 aa17.45■□□□□ 0.38
TPM3P1-201ENST00000413233 RSF1Q96T23 1441 aaPredicted RBP17.45■□□□□ 0.38
TPM3P1-201ENST00000413233 SMARCA2P51531 1590 aa17.45■□□□□ 0.38
TPM3P1-201ENST00000413233 NCAPD3P42695 1498 aa17.42■□□□□ 0.38
TPM3P1-201ENST00000413233 ATAD2BQ9ULI0 1458 aa17.39■□□□□ 0.37
TPM3P1-201ENST00000413233 NESP48681 1621 aa17.34■□□□□ 0.37
TPM3P1-201ENST00000413233 HMGXB3Q12766 1538 aa17.34■□□□□ 0.37
TPM3P1-201ENST00000413233 THOC2Q8NI27 1593 aaKnown RBP17.3■□□□□ 0.36
TPM3P1-201ENST00000413233 BAZ1BQ9UIG0 1483 aaKnown RBP17.24■□□□□ 0.35
TPM3P1-201ENST00000413233 WIZO95785 1651 aa17.23■□□□□ 0.35
TPM3P1-201ENST00000413233 TRIM41Q8WV44 630 aa17.21■□□□□ 0.35
TPM3P1-201ENST00000413233 TOP2AP11388 1531 aaKnown RBP17.21■□□□□ 0.34
TPM3P1-201ENST00000413233 KIF21AQ7Z4S6 1674 aa17.17■□□□□ 0.34
TPM3P1-201ENST00000413233 LAMC3Q9Y6N6 1575 aa17.15■□□□□ 0.34
TPM3P1-201ENST00000413233 SUPT5HO00267 1087 aaKnown RBP17.12■□□□□ 0.33
TPM3P1-201ENST00000413233 PDS5BQ9NTI5 1447 aa17.02■□□□□ 0.31
TPM3P1-201ENST00000413233 CCDC88BA6NC98 1476 aa16.95■□□□□ 0.3
TPM3P1-201ENST00000413233 MRC2Q9UBG0 1479 aa16.93■□□□□ 0.3
TPM3P1-201ENST00000413233 WDR62O43379 1518 aa16.92■□□□□ 0.3
TPM3P1-201ENST00000413233 CADPSQ9ULU8 1353 aa16.88■□□□□ 0.29
TPM3P1-201ENST00000413233 CFTRP13569 1480 aa16.86■□□□□ 0.29
TPM3P1-201ENST00000413233 PLPPR3Q6T4P5 718 aa16.83■□□□□ 0.28
TPM3P1-201ENST00000413233 CEP164Q9UPV0 1460 aa16.77■□□□□ 0.28
TPM3P1-201ENST00000413233 OSCARQ8IYS5 282 aa16.76■□□□□ 0.27
TPM3P1-201ENST00000413233 FANCD2Q9BXW9 1451 aa16.7■□□□□ 0.26
TPM3P1-201ENST00000413233 RIMBP3CA6NJZ7 1639 aa16.7■□□□□ 0.26
TPM3P1-201ENST00000413233 RIMBP3BA6NNM3 1639 aa16.7■□□□□ 0.26
TPM3P1-201ENST00000413233 RIMBP3Q9UFD9 1639 aa16.7■□□□□ 0.26
TPM3P1-201ENST00000413233 PRDM2Q13029 1718 aa16.69■□□□□ 0.26
TPM3P1-201ENST00000413233 MSH5O43196 834 aa16.65■□□□□ 0.26
TPM3P1-201ENST00000413233 URB2Q14146 1524 aaKnown RBP16.6■□□□□ 0.25
TPM3P1-201ENST00000413233 ABCC8Q09428 1581 aa16.58■□□□□ 0.24
TPM3P1-201ENST00000413233 ARHGEF11O15085 1522 aa16.56■□□□□ 0.24
TPM3P1-201ENST00000413233 PIAS4Q8N2W9 510 aaPredicted RBP16.55■□□□□ 0.24
TPM3P1-201ENST00000413233 PPP6R1Q9UPN7 881 aa16.53■□□□□ 0.24
TPM3P1-201ENST00000413233 ZNF608Q9ULD9 1512 aaPredicted RBP16.48■□□□□ 0.23
TPM3P1-201ENST00000413233 ADRA2BP18089 450 aa16.46■□□□□ 0.23
TPM3P1-201ENST00000413233 WRNQ14191 1432 aaPredicted RBP eCLIP16.45■□□□□ 0.22
TPM3P1-201ENST00000413233 DNMBPQ6XZF7 1577 aa16.43■□□□□ 0.22
TPM3P1-201ENST00000413233 IFT140Q96RY7 1462 aa16.43■□□□□ 0.22
TPM3P1-201ENST00000413233 CYB5RLQ6IPT4 315 aa16.41■□□□□ 0.22
TPM3P1-201ENST00000413233 EIF4G3O43432 1585 aaKnown RBP16.41■□□□□ 0.22
TPM3P1-201ENST00000413233 CHD1O14646 1710 aa16.41■□□□□ 0.22
TPM3P1-201ENST00000413233 TRHP20396 242 aaPredicted RBP16.4■□□□□ 0.22
TPM3P1-201ENST00000413233 TOPBP1Q92547 1522 aa16.4■□□□□ 0.22
TPM3P1-201ENST00000413233 TOP2BQ02880 1626 aa16.38■□□□□ 0.21
TPM3P1-201ENST00000413233 POTEDQ86YR6 584 aa16.38■□□□□ 0.21
TPM3P1-201ENST00000413233 BIVM-ERCC5R4GMW8 1640 aa16.37■□□□□ 0.21
TPM3P1-201ENST00000413233 ARAP1Q96P48 1450 aa16.37■□□□□ 0.21
TPM3P1-201ENST00000413233 CUX1P39880 1505 aa16.36■□□□□ 0.21
TPM3P1-201ENST00000413233 SYNJ1O43426 1573 aa16.3■□□□□ 0.2
TPM3P1-201ENST00000413233 POLA1P09884 1462 aaPredicted RBP16.28■□□□□ 0.2
TPM3P1-201ENST00000413233 FGD5Q6ZNL6 1462 aa16.27■□□□□ 0.19
TPM3P1-201ENST00000413233 TARBP1Q13395 1621 aaKnown RBP16.27■□□□□ 0.19
TPM3P1-201ENST00000413233 WDR97A6NE52 1622 aa16.26■□□□□ 0.19
TPM3P1-201ENST00000413233 AQRO60306 1485 aaKnown RBP eCLIP16.25■□□□□ 0.19
TPM3P1-201ENST00000413233 SOGA1O94964 1423 aa16.23■□□□□ 0.19
TPM3P1-201ENST00000413233 FBLN2P98095 1184 aa16.22■□□□□ 0.19
TPM3P1-201ENST00000413233 ABCA10Q8WWZ4 1543 aa16.22■□□□□ 0.19
TPM3P1-201ENST00000413233 EEA1Q15075 1411 aa16.16■□□□□ 0.18
TPM3P1-201ENST00000413233 CLASP1Q7Z460 1538 aa16.14■□□□□ 0.18
TPM3P1-201ENST00000413233 KIF27Q86VH2 1401 aa16.12■□□□□ 0.17
TPM3P1-201ENST00000413233 RAD54L2Q9Y4B4 1467 aa16.11■□□□□ 0.17
TPM3P1-201ENST00000413233 SNAPC4Q5SXM2 1469 aa16.1■□□□□ 0.17
TPM3P1-201ENST00000413233 ABCA5Q8WWZ7 1642 aa16.06■□□□□ 0.16
TPM3P1-201ENST00000413233 TDRD9Q8NDG6 1382 aaKnown RBP16.06■□□□□ 0.16
TPM3P1-201ENST00000413233 ERICH3Q5RHP9 1530 aa16.05■□□□□ 0.16
TPM3P1-201ENST00000413233 GAPVD1Q14C86 1478 aa16.05■□□□□ 0.16
TPM3P1-201ENST00000413233 GRIN2BQ13224 1484 aa16.03■□□□□ 0.16
TPM3P1-201ENST00000413233 MAGI1Q96QZ7 1491 aaPredicted RBP16.02■□□□□ 0.15
TPM3P1-201ENST00000413233 CHMP7Q8WUX9 453 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms