RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 NISCHQ9Y2I1 1504 aa19.45■□□□□ 0.7
HMGN1P34-201ENST00000413023 CCDC180Q9P1Z9 1646 aa16.75■□□□□ 0.27
HMGN1P34-201ENST00000413023 ZCCHC6Q5VYS8 1495 aaKnown RBP16.31■□□□□ 0.2
HMGN1P34-201ENST00000413023 DCAF8L2P0C7V8 631 aa16.17■□□□□ 0.18
HMGN1P34-201ENST00000413023 AEBP2Q6ZN18 517 aaPredicted RBP16.05■□□□□ 0.16
HMGN1P34-201ENST00000413023 SHROOM4Q9ULL8 1493 aa16.03■□□□□ 0.16
HMGN1P34-201ENST00000413023 ABCC9O60706 1549 aa16■□□□□ 0.15
HMGN1P34-201ENST00000413023 DCAF1Q9Y4B6 1507 aa16■□□□□ 0.15
HMGN1P34-201ENST00000413023 MYO15BQ96JP2 1530 aa15.77■□□□□ 0.11
HMGN1P34-201ENST00000413023 NACADO15069 1562 aa15.66■□□□□ 0.1
HMGN1P34-201ENST00000413023 SCRIBQ14160 1630 aa15.54■□□□□ 0.08
HMGN1P34-201ENST00000413023 RB1CC1Q8TDY2 1594 aa15.49■□□□□ 0.07
HMGN1P34-201ENST00000413023 SUPT5HO00267 1087 aaKnown RBP15.47■□□□□ 0.07
HMGN1P34-201ENST00000413023 PABPN1Q86U42 306 aaKnown RBP eCLIP15.23■□□□□ 0.03
HMGN1P34-201ENST00000413023 CECR2Q9BXF3 1484 aa15.22■□□□□ 0.03
HMGN1P34-201ENST00000413023 RSF1Q96T23 1441 aaPredicted RBP15.19■□□□□ 0.02
HMGN1P34-201ENST00000413023 UNC13AQ9UPW8 1703 aa15.19■□□□□ 0.02
HMGN1P34-201ENST00000413023 BICRAQ9NZM4 1560 aa15.16■□□□□ 0.02
HMGN1P34-201ENST00000413023 CHIC1Q5VXU3 224 aa15.16■□□□□ 0.02
HMGN1P34-201ENST00000413023 MROH2BQ7Z745 1585 aa15.09■□□□□ 0.01
HMGN1P34-201ENST00000413023 BAZ1AQ9NRL2 1556 aaPredicted RBP14.93□□□□□ -0.02
HMGN1P34-201ENST00000413023 WIZO95785 1651 aa14.91□□□□□ -0.02
HMGN1P34-201ENST00000413023 SMARCA4P51532 1647 aa14.88□□□□□ -0.03
HMGN1P34-201ENST00000413023 ATAD2BQ9ULI0 1458 aa14.7□□□□□ -0.06
HMGN1P34-201ENST00000413023 TOP2AP11388 1531 aaKnown RBP14.7□□□□□ -0.06
HMGN1P34-201ENST00000413023 PEG3Q9GZU2 1588 aa14.68□□□□□ -0.06
HMGN1P34-201ENST00000413023 CCDC88BA6NC98 1476 aa14.67□□□□□ -0.06
HMGN1P34-201ENST00000413023 EIF4G1Q04637 1599 aaKnown RBP14.63□□□□□ -0.07
HMGN1P34-201ENST00000413023 SMARCA2P51531 1590 aa14.61□□□□□ -0.07
HMGN1P34-201ENST00000413023 NCAPD3P42695 1498 aa14.56□□□□□ -0.08
HMGN1P34-201ENST00000413023 BAZ1BQ9UIG0 1483 aaKnown RBP14.55□□□□□ -0.08
HMGN1P34-201ENST00000413023 TRIM41Q8WV44 630 aa14.48□□□□□ -0.09
HMGN1P34-201ENST00000413023 HMGXB3Q12766 1538 aa14.42□□□□□ -0.1
HMGN1P34-201ENST00000413023 CC2D2AQ9P2K1 1620 aa14.41□□□□□ -0.1
HMGN1P34-201ENST00000413023 LOC105371045A0A1W2PR82 267 aa14.39□□□□□ -0.11
HMGN1P34-201ENST00000413023 ABCC8Q09428 1581 aa14.34□□□□□ -0.11
HMGN1P34-201ENST00000413023 DNAJC5BQ9UF47 199 aa14.34□□□□□ -0.11
HMGN1P34-201ENST00000413023 FAM9AQ8IZU1 332 aaPredicted RBP14.31□□□□□ -0.12
HMGN1P34-201ENST00000413023 CFTRP13569 1480 aa14.24□□□□□ -0.13
HMGN1P34-201ENST00000413023 WRNQ14191 1432 aaPredicted RBP eCLIP14.22□□□□□ -0.13
HMGN1P34-201ENST00000413023 CADPSQ9ULU8 1353 aa14.21□□□□□ -0.14
HMGN1P34-201ENST00000413023 SOGA1O94964 1423 aa14.16□□□□□ -0.14
HMGN1P34-201ENST00000413023 SYNJ1O43426 1573 aa14.16□□□□□ -0.14
HMGN1P34-201ENST00000413023 RUSC2Q8N2Y8 1516 aa14.15□□□□□ -0.14
HMGN1P34-201ENST00000413023 EHMT2Q96KQ7 1210 aa14.13□□□□□ -0.15
HMGN1P34-201ENST00000413023 NESP48681 1621 aa14.11□□□□□ -0.15
HMGN1P34-201ENST00000413023 CUX1P39880 1505 aa14.08□□□□□ -0.16
HMGN1P34-201ENST00000413023 CSRNP3Q8WYN3 585 aa14.06□□□□□ -0.16
HMGN1P34-201ENST00000413023 TOP2BQ02880 1626 aa14.04□□□□□ -0.16
HMGN1P34-201ENST00000413023 FANCD2Q9BXW9 1451 aa14.01□□□□□ -0.17
HMGN1P34-201ENST00000413023 BIVM-ERCC5R4GMW8 1640 aa14□□□□□ -0.17
HMGN1P34-201ENST00000413023 EEA1Q15075 1411 aa13.97□□□□□ -0.17
HMGN1P34-201ENST00000413023 PRDM2Q13029 1718 aa13.94□□□□□ -0.18
HMGN1P34-201ENST00000413023 LAMC3Q9Y6N6 1575 aa13.93□□□□□ -0.18
HMGN1P34-201ENST00000413023 FGD5Q6ZNL6 1462 aa13.88□□□□□ -0.19
HMGN1P34-201ENST00000413023 URB2Q14146 1524 aaKnown RBP13.88□□□□□ -0.19
HMGN1P34-201ENST00000413023 PDS5BQ9NTI5 1447 aa13.88□□□□□ -0.19
HMGN1P34-201ENST00000413023 TOPBP1Q92547 1522 aa13.87□□□□□ -0.19
HMGN1P34-201ENST00000413023 TNIKQ9UKE5 1360 aa13.86□□□□□ -0.19
HMGN1P34-201ENST00000413023 CEP164Q9UPV0 1460 aa13.86□□□□□ -0.19
HMGN1P34-201ENST00000413023 UBTFP17480 764 aaKnown RBP13.85□□□□□ -0.19
HMGN1P34-201ENST00000413023 RAD54L2Q9Y4B4 1467 aa13.85□□□□□ -0.19
HMGN1P34-201ENST00000413023 IGF1RP08069 1367 aa13.83□□□□□ -0.19
HMGN1P34-201ENST00000413023 DNMBPQ6XZF7 1577 aa13.83□□□□□ -0.19
HMGN1P34-201ENST00000413023 KIF27Q86VH2 1401 aa13.82□□□□□ -0.2
HMGN1P34-201ENST00000413023 RAPGEF2Q9Y4G8 1499 aa13.82□□□□□ -0.2
HMGN1P34-201ENST00000413023 CUX2O14529 1486 aa13.81□□□□□ -0.2
HMGN1P34-201ENST00000413023 GOLGA3Q08378 1498 aa13.81□□□□□ -0.2
HMGN1P34-201ENST00000413023 PRXQ9BXM0 1461 aa13.81□□□□□ -0.2
HMGN1P34-201ENST00000413023 POLA1P09884 1462 aaPredicted RBP13.8□□□□□ -0.2
HMGN1P34-201ENST00000413023 KIF21BO75037 1637 aa13.79□□□□□ -0.2
HMGN1P34-201ENST00000413023 KIF21AQ7Z4S6 1674 aa13.78□□□□□ -0.2
HMGN1P34-201ENST00000413023 CEP162Q5TB80 1403 aa13.76□□□□□ -0.21
HMGN1P34-201ENST00000413023 ABCA10Q8WWZ4 1543 aa13.74□□□□□ -0.21
HMGN1P34-201ENST00000413023 TDRD9Q8NDG6 1382 aaKnown RBP13.72□□□□□ -0.21
HMGN1P34-201ENST00000413023 SENP3Q9H4L4 574 aaPredicted RBP13.71□□□□□ -0.21
HMGN1P34-201ENST00000413023 CARMIL1Q5VZK9 1371 aa13.71□□□□□ -0.22
HMGN1P34-201ENST00000413023 MRC2Q9UBG0 1479 aa13.7□□□□□ -0.22
HMGN1P34-201ENST00000413023 PPARGC1BQ86YN6 1023 aaKnown RBP13.7□□□□□ -0.22
HMGN1P34-201ENST00000413023 RANGAP1P46060 587 aaPredicted RBP13.68□□□□□ -0.22
HMGN1P34-201ENST00000413023 PCGF6Q9BYE7 350 aa13.68□□□□□ -0.22
HMGN1P34-201ENST00000413023 ERICH3Q5RHP9 1530 aa13.68□□□□□ -0.22
HMGN1P34-201ENST00000413023 CLIP1P30622 1438 aa13.64□□□□□ -0.23
HMGN1P34-201ENST00000413023 TARBP1Q13395 1621 aaKnown RBP13.64□□□□□ -0.23
HMGN1P34-201ENST00000413023 TRIM26Q12899 539 aaPredicted RBP13.62□□□□□ -0.23
HMGN1P34-201ENST00000413023 AQRO60306 1485 aaKnown RBP eCLIP13.61□□□□□ -0.23
HMGN1P34-201ENST00000413023 WDR97A6NE52 1622 aa13.61□□□□□ -0.23
HMGN1P34-201ENST00000413023 WDR62O43379 1518 aa13.61□□□□□ -0.23
HMGN1P34-201ENST00000413023 GAPVD1Q14C86 1478 aa13.61□□□□□ -0.23
HMGN1P34-201ENST00000413023 ERCC6Q03468 1493 aa13.6□□□□□ -0.23
HMGN1P34-201ENST00000413023 ABCA5Q8WWZ7 1642 aa13.58□□□□□ -0.24
HMGN1P34-201ENST00000413023 ZNF608Q9ULD9 1512 aaPredicted RBP13.58□□□□□ -0.24
HMGN1P34-201ENST00000413023 IFT140Q96RY7 1462 aa13.55□□□□□ -0.24
HMGN1P34-201ENST00000413023 THOC2Q8NI27 1593 aaKnown RBP13.54□□□□□ -0.24
HMGN1P34-201ENST00000413023 ARAP1Q96P48 1450 aa13.54□□□□□ -0.24
HMGN1P34-201ENST00000413023 PHF23Q9BUL5 403 aaPredicted RBP13.53□□□□□ -0.24
HMGN1P34-201ENST00000413023 ARHGAP35Q9NRY4 1499 aa13.52□□□□□ -0.25
HMGN1P34-201ENST00000413023 VPS8Q8N3P4 1428 aa13.51□□□□□ -0.25
HMGN1P34-201ENST00000413023 TTBK1Q5TCY1 1321 aaPredicted RBP13.49□□□□□ -0.25
HMGN1P34-201ENST00000413023 P3H3Q8IVL6 736 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms