RNA–Protein interactions for RNA: ENST00000412866.2

VSIG4-202, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

TSL 2 BASIC

Gene VSIG4, Length 1,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-202ENST00000412866 NISCHQ9Y2I1 1504 aa22.11■■□□□ 1.13
VSIG4-202ENST00000412866 CCDC180Q9P1Z9 1646 aa19.32■□□□□ 0.68
VSIG4-202ENST00000412866 ZCCHC6Q5VYS8 1495 aaKnown RBP18.58■□□□□ 0.57
VSIG4-202ENST00000412866 DCAF1Q9Y4B6 1507 aa18.31■□□□□ 0.52
VSIG4-202ENST00000412866 ABCC9O60706 1549 aa18.24■□□□□ 0.51
VSIG4-202ENST00000412866 DCAF8L2P0C7V8 631 aa18.2■□□□□ 0.5
VSIG4-202ENST00000412866 MYO15BQ96JP2 1530 aa18.1■□□□□ 0.49
VSIG4-202ENST00000412866 NACADO15069 1562 aa17.99■□□□□ 0.47
VSIG4-202ENST00000412866 SHROOM4Q9ULL8 1493 aa17.98■□□□□ 0.47
VSIG4-202ENST00000412866 RB1CC1Q8TDY2 1594 aa17.84■□□□□ 0.45
VSIG4-202ENST00000412866 SCRIBQ14160 1630 aa17.74■□□□□ 0.43
VSIG4-202ENST00000412866 UNC13AQ9UPW8 1703 aa17.44■□□□□ 0.38
VSIG4-202ENST00000412866 BICRAQ9NZM4 1560 aa17.28■□□□□ 0.36
VSIG4-202ENST00000412866 SUPT5HO00267 1087 aaKnown RBP17.27■□□□□ 0.36
VSIG4-202ENST00000412866 PABPN1Q86U42 306 aaKnown RBP eCLIP17.18■□□□□ 0.34
VSIG4-202ENST00000412866 CECR2Q9BXF3 1484 aa17.16■□□□□ 0.34
VSIG4-202ENST00000412866 RSF1Q96T23 1441 aaPredicted RBP17.13■□□□□ 0.33
VSIG4-202ENST00000412866 BAZ1AQ9NRL2 1556 aaPredicted RBP17.08■□□□□ 0.32
VSIG4-202ENST00000412866 MROH2BQ7Z745 1585 aa17.07■□□□□ 0.32
VSIG4-202ENST00000412866 SMARCA4P51532 1647 aa17.01■□□□□ 0.31
VSIG4-202ENST00000412866 WIZO95785 1651 aa16.92■□□□□ 0.3
VSIG4-202ENST00000412866 PEG3Q9GZU2 1588 aa16.81■□□□□ 0.28
VSIG4-202ENST00000412866 TOP2AP11388 1531 aaKnown RBP16.78■□□□□ 0.28
VSIG4-202ENST00000412866 EIF4G1Q04637 1599 aaKnown RBP16.77■□□□□ 0.28
VSIG4-202ENST00000412866 SMARCA2P51531 1590 aa16.74■□□□□ 0.27
VSIG4-202ENST00000412866 ATAD2BQ9ULI0 1458 aa16.73■□□□□ 0.27
VSIG4-202ENST00000412866 BAZ1BQ9UIG0 1483 aaKnown RBP16.64■□□□□ 0.25
VSIG4-202ENST00000412866 HMGXB3Q12766 1538 aa16.59■□□□□ 0.25
VSIG4-202ENST00000412866 CCDC88BA6NC98 1476 aa16.58■□□□□ 0.24
VSIG4-202ENST00000412866 NCAPD3P42695 1498 aa16.58■□□□□ 0.24
VSIG4-202ENST00000412866 CHIC1Q5VXU3 224 aa16.53■□□□□ 0.24
VSIG4-202ENST00000412866 CC2D2AQ9P2K1 1620 aa16.52■□□□□ 0.24
VSIG4-202ENST00000412866 TRIM41Q8WV44 630 aa16.26■□□□□ 0.19
VSIG4-202ENST00000412866 CFTRP13569 1480 aa16.21■□□□□ 0.19
VSIG4-202ENST00000412866 ABCC8Q09428 1581 aa16.21■□□□□ 0.19
VSIG4-202ENST00000412866 CADPSQ9ULU8 1353 aa16.15■□□□□ 0.18
VSIG4-202ENST00000412866 PRDM2Q13029 1718 aa16.14■□□□□ 0.17
VSIG4-202ENST00000412866 WRNQ14191 1432 aaPredicted RBP eCLIP16.13■□□□□ 0.17
VSIG4-202ENST00000412866 SYNJ1O43426 1573 aa16.07■□□□□ 0.16
VSIG4-202ENST00000412866 DNAJC5BQ9UF47 199 aa16.06■□□□□ 0.16
VSIG4-202ENST00000412866 LAMC3Q9Y6N6 1575 aa16.03■□□□□ 0.16
VSIG4-202ENST00000412866 TOP2BQ02880 1626 aa16.01■□□□□ 0.15
VSIG4-202ENST00000412866 NESP48681 1621 aa16.01■□□□□ 0.15
VSIG4-202ENST00000412866 BIVM-ERCC5R4GMW8 1640 aa16■□□□□ 0.15
VSIG4-202ENST00000412866 FANCD2Q9BXW9 1451 aa15.98■□□□□ 0.15
VSIG4-202ENST00000412866 CUX1P39880 1505 aa15.97■□□□□ 0.15
VSIG4-202ENST00000412866 FAM9AQ8IZU1 332 aaPredicted RBP15.94■□□□□ 0.14
VSIG4-202ENST00000412866 EEA1Q15075 1411 aa15.91■□□□□ 0.14
VSIG4-202ENST00000412866 PDS5BQ9NTI5 1447 aa15.91■□□□□ 0.14
VSIG4-202ENST00000412866 SOGA1O94964 1423 aa15.9■□□□□ 0.14
VSIG4-202ENST00000412866 CEP164Q9UPV0 1460 aa15.9■□□□□ 0.14
VSIG4-202ENST00000412866 LOC105371045A0A1W2PR82 267 aa15.87■□□□□ 0.13
VSIG4-202ENST00000412866 DNMBPQ6XZF7 1577 aa15.86■□□□□ 0.13
VSIG4-202ENST00000412866 RUSC2Q8N2Y8 1516 aa15.83■□□□□ 0.13
VSIG4-202ENST00000412866 KIF21AQ7Z4S6 1674 aa15.82■□□□□ 0.12
VSIG4-202ENST00000412866 TOPBP1Q92547 1522 aa15.81■□□□□ 0.12
VSIG4-202ENST00000412866 FGD5Q6ZNL6 1462 aa15.8■□□□□ 0.12
VSIG4-202ENST00000412866 URB2Q14146 1524 aaKnown RBP15.78■□□□□ 0.12
VSIG4-202ENST00000412866 CSRNP3Q8WYN3 585 aa15.78■□□□□ 0.12
VSIG4-202ENST00000412866 KIF27Q86VH2 1401 aa15.73■□□□□ 0.11
VSIG4-202ENST00000412866 POLA1P09884 1462 aaPredicted RBP15.73■□□□□ 0.11
VSIG4-202ENST00000412866 MRC2Q9UBG0 1479 aa15.72■□□□□ 0.11
VSIG4-202ENST00000412866 KIF21BO75037 1637 aa15.71■□□□□ 0.11
VSIG4-202ENST00000412866 CUX2O14529 1486 aa15.7■□□□□ 0.1
VSIG4-202ENST00000412866 EHMT2Q96KQ7 1210 aa15.7■□□□□ 0.1
VSIG4-202ENST00000412866 GOLGA3Q08378 1498 aa15.69■□□□□ 0.1
VSIG4-202ENST00000412866 ERCC6Q03468 1493 aa15.67■□□□□ 0.1
VSIG4-202ENST00000412866 ABCA10Q8WWZ4 1543 aa15.67■□□□□ 0.1
VSIG4-202ENST00000412866 RAD54L2Q9Y4B4 1467 aa15.66■□□□□ 0.1
VSIG4-202ENST00000412866 WDR62O43379 1518 aa15.64■□□□□ 0.09
VSIG4-202ENST00000412866 WDR97A6NE52 1622 aa15.63■□□□□ 0.09
VSIG4-202ENST00000412866 PRXQ9BXM0 1461 aa15.62■□□□□ 0.09
VSIG4-202ENST00000412866 TNIKQ9UKE5 1360 aa15.61■□□□□ 0.09
VSIG4-202ENST00000412866 ERICH3Q5RHP9 1530 aa15.61■□□□□ 0.09
VSIG4-202ENST00000412866 THOC2Q8NI27 1593 aaKnown RBP15.6■□□□□ 0.09
VSIG4-202ENST00000412866 RAPGEF2Q9Y4G8 1499 aa15.59■□□□□ 0.09
VSIG4-202ENST00000412866 IGF1RP08069 1367 aa15.57■□□□□ 0.08
VSIG4-202ENST00000412866 TARBP1Q13395 1621 aaKnown RBP15.57■□□□□ 0.08
VSIG4-202ENST00000412866 UBTFP17480 764 aaKnown RBP15.57■□□□□ 0.08
VSIG4-202ENST00000412866 ABCA5Q8WWZ7 1642 aa15.56■□□□□ 0.08
VSIG4-202ENST00000412866 CEP162Q5TB80 1403 aa15.54■□□□□ 0.08
VSIG4-202ENST00000412866 IFT140Q96RY7 1462 aa15.52■□□□□ 0.07
VSIG4-202ENST00000412866 GAPVD1Q14C86 1478 aa15.5■□□□□ 0.07
VSIG4-202ENST00000412866 CUL7Q14999 1698 aa15.5■□□□□ 0.07
VSIG4-202ENST00000412866 TDRD9Q8NDG6 1382 aaKnown RBP15.5■□□□□ 0.07
VSIG4-202ENST00000412866 CARMIL1Q5VZK9 1371 aa15.49■□□□□ 0.07
VSIG4-202ENST00000412866 PBRM1Q86U86 1689 aa15.43■□□□□ 0.06
VSIG4-202ENST00000412866 CLIP1P30622 1438 aa15.42■□□□□ 0.06
VSIG4-202ENST00000412866 ZNF608Q9ULD9 1512 aaPredicted RBP15.42■□□□□ 0.06
VSIG4-202ENST00000412866 AQRO60306 1485 aaKnown RBP eCLIP15.41■□□□□ 0.06
VSIG4-202ENST00000412866 GRIN2BQ13224 1484 aa15.4■□□□□ 0.06
VSIG4-202ENST00000412866 EIF4G3O43432 1585 aaKnown RBP15.39■□□□□ 0.05
VSIG4-202ENST00000412866 ADAMTS12P58397 1594 aa15.36■□□□□ 0.05
VSIG4-202ENST00000412866 FHAD1B1AJZ9 1412 aa15.34■□□□□ 0.05
VSIG4-202ENST00000412866 CTTNBP2Q8WZ74 1663 aa15.3■□□□□ 0.04
VSIG4-202ENST00000412866 RANGAP1P46060 587 aaPredicted RBP15.3■□□□□ 0.04
VSIG4-202ENST00000412866 SNAPC4Q5SXM2 1469 aa15.3■□□□□ 0.04
VSIG4-202ENST00000412866 VPS8Q8N3P4 1428 aa15.29■□□□□ 0.04
VSIG4-202ENST00000412866 ARAP1Q96P48 1450 aa15.28■□□□□ 0.04
VSIG4-202ENST00000412866 MAGI1Q96QZ7 1491 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms