RNA–Protein interactions for RNA: ENST00000412828.1

AC003087.1-201, humanhuman

TSL 3 BASIC

Gene AC003087.1, Length 499 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003087.1-201ENST00000412828 NISCHQ9Y2I1 1504 aa23.69■■□□□ 1.38
AC003087.1-201ENST00000412828 ABCC9O60706 1549 aa22.93■■□□□ 1.26
AC003087.1-201ENST00000412828 DNAJC5BQ9UF47 199 aa22.6■■□□□ 1.21
AC003087.1-201ENST00000412828 CCDC180Q9P1Z9 1646 aa21.76■■□□□ 1.07
AC003087.1-201ENST00000412828 DNAJC5Q9H3Z4 198 aa21.7■■□□□ 1.06
AC003087.1-201ENST00000412828 RB1CC1Q8TDY2 1594 aa21.32■■□□□ 1
AC003087.1-201ENST00000412828 PABPN1Q86U42 306 aaKnown RBP eCLIP21.17■□□□□ 0.98
AC003087.1-201ENST00000412828 NACADO15069 1562 aa20.9■□□□□ 0.94
AC003087.1-201ENST00000412828 CECR2Q9BXF3 1484 aa20.81■□□□□ 0.92
AC003087.1-201ENST00000412828 UNC13AQ9UPW8 1703 aa20.72■□□□□ 0.91
AC003087.1-201ENST00000412828 BICRAQ9NZM4 1560 aa20.72■□□□□ 0.91
AC003087.1-201ENST00000412828 CC2D2AQ9P2K1 1620 aa20.65■□□□□ 0.9
AC003087.1-201ENST00000412828 DCAF8L2P0C7V8 631 aa20.52■□□□□ 0.88
AC003087.1-201ENST00000412828 SHROOM4Q9ULL8 1493 aa20.4■□□□□ 0.86
AC003087.1-201ENST00000412828 CUX2O14529 1486 aa20.32■□□□□ 0.84
AC003087.1-201ENST00000412828 EIF4G1Q04637 1599 aaKnown RBP20.32■□□□□ 0.84
AC003087.1-201ENST00000412828 MYO15BQ96JP2 1530 aa20.25■□□□□ 0.83
AC003087.1-201ENST00000412828 TRIM41Q8WV44 630 aa20.19■□□□□ 0.82
AC003087.1-201ENST00000412828 ERCC6Q03468 1493 aa19.92■□□□□ 0.78
AC003087.1-201ENST00000412828 SCRIBQ14160 1630 aa19.76■□□□□ 0.75
AC003087.1-201ENST00000412828 DCAF1Q9Y4B6 1507 aa19.53■□□□□ 0.72
AC003087.1-201ENST00000412828 THOC2Q8NI27 1593 aaKnown RBP19.39■□□□□ 0.69
AC003087.1-201ENST00000412828 ZCCHC6Q5VYS8 1495 aaKnown RBP19.37■□□□□ 0.69
AC003087.1-201ENST00000412828 AEBP2Q6ZN18 517 aaPredicted RBP19.36■□□□□ 0.69
AC003087.1-201ENST00000412828 NESP48681 1621 aa19.34■□□□□ 0.69
AC003087.1-201ENST00000412828 NCAPD3P42695 1498 aa19.34■□□□□ 0.69
AC003087.1-201ENST00000412828 OSCARQ8IYS5 282 aa19.21■□□□□ 0.67
AC003087.1-201ENST00000412828 SMARCA2P51531 1590 aa19.15■□□□□ 0.66
AC003087.1-201ENST00000412828 BAZ1AQ9NRL2 1556 aaPredicted RBP19.13■□□□□ 0.65
AC003087.1-201ENST00000412828 ATAD2BQ9ULI0 1458 aa19.07■□□□□ 0.64
AC003087.1-201ENST00000412828 LAMC3Q9Y6N6 1575 aa19.06■□□□□ 0.64
AC003087.1-201ENST00000412828 HMGXB3Q12766 1538 aa19.05■□□□□ 0.64
AC003087.1-201ENST00000412828 PDS5BQ9NTI5 1447 aa19.02■□□□□ 0.64
AC003087.1-201ENST00000412828 RIMBP3CA6NJZ7 1639 aa19.01■□□□□ 0.63
AC003087.1-201ENST00000412828 RIMBP3BA6NNM3 1639 aa19.01■□□□□ 0.63
AC003087.1-201ENST00000412828 RIMBP3Q9UFD9 1639 aa19.01■□□□□ 0.63
AC003087.1-201ENST00000412828 KIF21AQ7Z4S6 1674 aa19.01■□□□□ 0.63
AC003087.1-201ENST00000412828 TRHP20396 242 aaPredicted RBP19■□□□□ 0.63
AC003087.1-201ENST00000412828 MRC2Q9UBG0 1479 aa18.9■□□□□ 0.62
AC003087.1-201ENST00000412828 WDR62O43379 1518 aa18.89■□□□□ 0.61
AC003087.1-201ENST00000412828 ARHGEF11O15085 1522 aa18.84■□□□□ 0.61
AC003087.1-201ENST00000412828 BAZ1BQ9UIG0 1483 aaKnown RBP18.82■□□□□ 0.6
AC003087.1-201ENST00000412828 CYB5RLQ6IPT4 315 aa18.81■□□□□ 0.6
AC003087.1-201ENST00000412828 ILDR1Q86SU0 546 aaPredicted RBP18.73■□□□□ 0.59
AC003087.1-201ENST00000412828 SMARCA4P51532 1647 aa18.71■□□□□ 0.58
AC003087.1-201ENST00000412828 CADPSQ9ULU8 1353 aa18.68■□□□□ 0.58
AC003087.1-201ENST00000412828 ARAP1Q96P48 1450 aa18.58■□□□□ 0.56
AC003087.1-201ENST00000412828 CEP164Q9UPV0 1460 aa18.58■□□□□ 0.56
AC003087.1-201ENST00000412828 PEG3Q9GZU2 1588 aa18.57■□□□□ 0.56
AC003087.1-201ENST00000412828 FANCD2Q9BXW9 1451 aa18.45■□□□□ 0.54
AC003087.1-201ENST00000412828 RSF1Q96T23 1441 aaPredicted RBP18.4■□□□□ 0.54
AC003087.1-201ENST00000412828 URB2Q14146 1524 aaKnown RBP18.35■□□□□ 0.53
AC003087.1-201ENST00000412828 ZNF608Q9ULD9 1512 aaPredicted RBP18.32■□□□□ 0.52
AC003087.1-201ENST00000412828 IFT140Q96RY7 1462 aa18.27■□□□□ 0.52
AC003087.1-201ENST00000412828 MROH2BQ7Z745 1585 aa18.21■□□□□ 0.51
AC003087.1-201ENST00000412828 CFTRP13569 1480 aa18.2■□□□□ 0.5
AC003087.1-201ENST00000412828 CHD1O14646 1710 aa18.19■□□□□ 0.5
AC003087.1-201ENST00000412828 FBLN2P98095 1184 aa18.15■□□□□ 0.5
AC003087.1-201ENST00000412828 EIF4G3O43432 1585 aaKnown RBP18.14■□□□□ 0.49
AC003087.1-201ENST00000412828 KDM4FA0A1W2PPD8 638 aa18.05■□□□□ 0.48
AC003087.1-201ENST00000412828 CLASP1Q7Z460 1538 aa18.02■□□□□ 0.47
AC003087.1-201ENST00000412828 AQRO60306 1485 aaKnown RBP eCLIP18.01■□□□□ 0.47
AC003087.1-201ENST00000412828 TOPBP1Q92547 1522 aa17.95■□□□□ 0.46
AC003087.1-201ENST00000412828 GAPVD1Q14C86 1478 aa17.95■□□□□ 0.46
AC003087.1-201ENST00000412828 SYNJ1O43426 1573 aa17.91■□□□□ 0.46
AC003087.1-201ENST00000412828 WIZO95785 1651 aa17.91■□□□□ 0.46
AC003087.1-201ENST00000412828 ABCC8Q09428 1581 aa17.88■□□□□ 0.45
AC003087.1-201ENST00000412828 FBXO41Q8TF61 875 aa17.88■□□□□ 0.45
AC003087.1-201ENST00000412828 TARBP1Q13395 1621 aaKnown RBP17.87■□□□□ 0.45
AC003087.1-201ENST00000412828 ERCC6L2Q5T890 1561 aa17.85■□□□□ 0.45
AC003087.1-201ENST00000412828 CHMP7Q8WUX9 453 aaPredicted RBP17.85■□□□□ 0.45
AC003087.1-201ENST00000412828 PRDM2Q13029 1718 aa17.81■□□□□ 0.44
AC003087.1-201ENST00000412828 SNAPC4Q5SXM2 1469 aa17.79■□□□□ 0.44
AC003087.1-201ENST00000412828 KIF13AQ9H1H9 1805 aa17.78■□□□□ 0.44
AC003087.1-201ENST00000412828 DNMBPQ6XZF7 1577 aa17.77■□□□□ 0.44
AC003087.1-201ENST00000412828 LMTK3Q96Q04 1460 aa17.75■□□□□ 0.43
AC003087.1-201ENST00000412828 HECW2Q9P2P5 1572 aa17.74■□□□□ 0.43
AC003087.1-201ENST00000412828 MAGI1Q96QZ7 1491 aaPredicted RBP17.72■□□□□ 0.43
AC003087.1-201ENST00000412828 TDRD9Q8NDG6 1382 aaKnown RBP17.72■□□□□ 0.43
AC003087.1-201ENST00000412828 SYNJ2O15056 1496 aa17.69■□□□□ 0.42
AC003087.1-201ENST00000412828 POLA1P09884 1462 aaPredicted RBP17.69■□□□□ 0.42
AC003087.1-201ENST00000412828 KDM6BO15054 1643 aa17.67■□□□□ 0.42
AC003087.1-201ENST00000412828 SOCS7O14512 581 aa17.66■□□□□ 0.42
AC003087.1-201ENST00000412828 FAM69CQ0P6D2 419 aa17.66■□□□□ 0.42
AC003087.1-201ENST00000412828 WDR97A6NE52 1622 aa17.65■□□□□ 0.42
AC003087.1-201ENST00000412828 TOP2AP11388 1531 aaKnown RBP17.64■□□□□ 0.41
AC003087.1-201ENST00000412828 RAD54L2Q9Y4B4 1467 aa17.63■□□□□ 0.41
AC003087.1-201ENST00000412828 SOGA1O94964 1423 aa17.62■□□□□ 0.41
AC003087.1-201ENST00000412828 ABCC10Q5T3U5 1492 aa17.62■□□□□ 0.41
AC003087.1-201ENST00000412828 ADGRL1O94910 1474 aa17.6■□□□□ 0.41
AC003087.1-201ENST00000412828 GRIN2BQ13224 1484 aa17.6■□□□□ 0.41
AC003087.1-201ENST00000412828 ILDR2Q71H61 639 aa17.51■□□□□ 0.39
AC003087.1-201ENST00000412828 CEP170Q5SW79 1584 aa17.49■□□□□ 0.39
AC003087.1-201ENST00000412828 DIP2BQ9P265 1576 aa17.49■□□□□ 0.39
AC003087.1-201ENST00000412828 MAPKBP1O60336 1514 aa17.47■□□□□ 0.39
AC003087.1-201ENST00000412828 CCDC88BA6NC98 1476 aa17.46■□□□□ 0.39
AC003087.1-201ENST00000412828 NPM1P06748 294 aaKnown RBP eCLIP17.46■□□□□ 0.39
AC003087.1-201ENST00000412828 FGD5Q6ZNL6 1462 aa17.4■□□□□ 0.38
AC003087.1-201ENST00000412828 DISP3Q9P2K9 1392 aa17.39■□□□□ 0.37
AC003087.1-201ENST00000412828 SHROOM2Q13796 1616 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms