RNA–Protein interactions for RNA: ENST00000412814.1

CX3CR1-203, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

TSL 4

Gene CX3CR1, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-203ENST00000412814 NISCHQ9Y2I1 1504 aa38.21■■■■□ 3.71
CX3CR1-203ENST00000412814 CCDC180Q9P1Z9 1646 aa33.74■■■□□ 2.99
CX3CR1-203ENST00000412814 ABCC9O60706 1549 aa32.49■■■□□ 2.79
CX3CR1-203ENST00000412814 ZCCHC6Q5VYS8 1495 aaKnown RBP31.89■■■□□ 2.7
CX3CR1-203ENST00000412814 DCAF8L2P0C7V8 631 aa31.88■■■□□ 2.69
CX3CR1-203ENST00000412814 DCAF1Q9Y4B6 1507 aa31.69■■■□□ 2.66
CX3CR1-203ENST00000412814 NACADO15069 1562 aa31.66■■■□□ 2.66
CX3CR1-203ENST00000412814 MYO15BQ96JP2 1530 aa31.65■■■□□ 2.66
CX3CR1-203ENST00000412814 RB1CC1Q8TDY2 1594 aa31.56■■■□□ 2.64
CX3CR1-203ENST00000412814 SCRIBQ14160 1630 aa30.76■■■□□ 2.52
CX3CR1-203ENST00000412814 UNC13AQ9UPW8 1703 aa30.67■■■□□ 2.5
CX3CR1-203ENST00000412814 PABPN1Q86U42 306 aaKnown RBP eCLIP30.49■■■□□ 2.47
CX3CR1-203ENST00000412814 SHROOM4Q9ULL8 1493 aa30.48■■■□□ 2.47
CX3CR1-203ENST00000412814 BICRAQ9NZM4 1560 aa30.43■■■□□ 2.46
CX3CR1-203ENST00000412814 EIF4G1Q04637 1599 aaKnown RBP29.65■■■□□ 2.34
CX3CR1-203ENST00000412814 CECR2Q9BXF3 1484 aa29.63■■■□□ 2.33
CX3CR1-203ENST00000412814 BAZ1AQ9NRL2 1556 aaPredicted RBP29.63■■■□□ 2.33
CX3CR1-203ENST00000412814 SMARCA4P51532 1647 aa29.5■■■□□ 2.31
CX3CR1-203ENST00000412814 CC2D2AQ9P2K1 1620 aa29.4■■■□□ 2.3
CX3CR1-203ENST00000412814 MROH2BQ7Z745 1585 aa29.39■■■□□ 2.3
CX3CR1-203ENST00000412814 SMARCA2P51531 1590 aa29.3■■■□□ 2.28
CX3CR1-203ENST00000412814 RSF1Q96T23 1441 aaPredicted RBP29.3■■■□□ 2.28
CX3CR1-203ENST00000412814 DNAJC5BQ9UF47 199 aa29.28■■■□□ 2.28
CX3CR1-203ENST00000412814 ATAD2BQ9ULI0 1458 aa29.24■■■□□ 2.27
CX3CR1-203ENST00000412814 PEG3Q9GZU2 1588 aa29.22■■■□□ 2.27
CX3CR1-203ENST00000412814 NCAPD3P42695 1498 aa29.19■■■□□ 2.26
CX3CR1-203ENST00000412814 WIZO95785 1651 aa29.1■■■□□ 2.25
CX3CR1-203ENST00000412814 BAZ1BQ9UIG0 1483 aaKnown RBP29.08■■■□□ 2.25
CX3CR1-203ENST00000412814 SUPT5HO00267 1087 aaKnown RBP29.07■■■□□ 2.24
CX3CR1-203ENST00000412814 HMGXB3Q12766 1538 aa29.06■■■□□ 2.24
CX3CR1-203ENST00000412814 TOP2AP11388 1531 aaKnown RBP28.88■■■□□ 2.21
CX3CR1-203ENST00000412814 CCDC88BA6NC98 1476 aa28.54■■■□□ 2.16
CX3CR1-203ENST00000412814 CADPSQ9ULU8 1353 aa28.4■■■□□ 2.14
CX3CR1-203ENST00000412814 LAMC3Q9Y6N6 1575 aa28.33■■■□□ 2.13
CX3CR1-203ENST00000412814 CFTRP13569 1480 aa28.29■■■□□ 2.12
CX3CR1-203ENST00000412814 PDS5BQ9NTI5 1447 aa28.21■■■□□ 2.11
CX3CR1-203ENST00000412814 NESP48681 1621 aa28.21■■■□□ 2.11
CX3CR1-203ENST00000412814 PRDM2Q13029 1718 aa28.07■■■□□ 2.08
CX3CR1-203ENST00000412814 ERCC6Q03468 1493 aa28.07■■■□□ 2.08
CX3CR1-203ENST00000412814 FANCD2Q9BXW9 1451 aa28.02■■■□□ 2.08
CX3CR1-203ENST00000412814 CEP164Q9UPV0 1460 aa27.96■■■□□ 2.07
CX3CR1-203ENST00000412814 KIF21AQ7Z4S6 1674 aa27.88■■■□□ 2.05
CX3CR1-203ENST00000412814 MRC2Q9UBG0 1479 aa27.8■■■□□ 2.04
CX3CR1-203ENST00000412814 ABCC8Q09428 1581 aa27.8■■■□□ 2.04
CX3CR1-203ENST00000412814 WRNQ14191 1432 aaPredicted RBP eCLIP27.67■■■□□ 2.02
CX3CR1-203ENST00000412814 THOC2Q8NI27 1593 aaKnown RBP27.65■■■□□ 2.02
CX3CR1-203ENST00000412814 URB2Q14146 1524 aaKnown RBP27.64■■■□□ 2.02
CX3CR1-203ENST00000412814 DNMBPQ6XZF7 1577 aa27.64■■■□□ 2.01
CX3CR1-203ENST00000412814 WDR62O43379 1518 aa27.63■■■□□ 2.01
CX3CR1-203ENST00000412814 TOPBP1Q92547 1522 aa27.62■■■□□ 2.01
CX3CR1-203ENST00000412814 CUX2O14529 1486 aa27.56■■■□□ 2
CX3CR1-203ENST00000412814 CUX1P39880 1505 aa27.55■■■□□ 2
CX3CR1-203ENST00000412814 TRIM41Q8WV44 630 aa27.51■■□□□ 1.99
CX3CR1-203ENST00000412814 TOP2BQ02880 1626 aa27.5■■□□□ 1.99
CX3CR1-203ENST00000412814 BIVM-ERCC5R4GMW8 1640 aa27.47■■□□□ 1.99
CX3CR1-203ENST00000412814 SYNJ1O43426 1573 aa27.44■■□□□ 1.98
CX3CR1-203ENST00000412814 FGD5Q6ZNL6 1462 aa27.42■■□□□ 1.98
CX3CR1-203ENST00000412814 CHIC1Q5VXU3 224 aa27.41■■□□□ 1.98
CX3CR1-203ENST00000412814 POLA1P09884 1462 aaPredicted RBP27.4■■□□□ 1.98
CX3CR1-203ENST00000412814 SOGA1O94964 1423 aa27.4■■□□□ 1.98
CX3CR1-203ENST00000412814 IFT140Q96RY7 1462 aa27.38■■□□□ 1.97
CX3CR1-203ENST00000412814 RAD54L2Q9Y4B4 1467 aa27.25■■□□□ 1.95
CX3CR1-203ENST00000412814 TARBP1Q13395 1621 aaKnown RBP27.22■■□□□ 1.95
CX3CR1-203ENST00000412814 ABCA10Q8WWZ4 1543 aa27.21■■□□□ 1.95
CX3CR1-203ENST00000412814 WDR97A6NE52 1622 aa27.16■■□□□ 1.94
CX3CR1-203ENST00000412814 TDRD9Q8NDG6 1382 aaKnown RBP27.12■■□□□ 1.93
CX3CR1-203ENST00000412814 KIF27Q86VH2 1401 aa27.11■■□□□ 1.93
CX3CR1-203ENST00000412814 ZNF608Q9ULD9 1512 aaPredicted RBP27.08■■□□□ 1.93
CX3CR1-203ENST00000412814 GAPVD1Q14C86 1478 aa27.06■■□□□ 1.92
CX3CR1-203ENST00000412814 AQRO60306 1485 aaKnown RBP eCLIP27.06■■□□□ 1.92
CX3CR1-203ENST00000412814 GRIN2BQ13224 1484 aa27■■□□□ 1.91
CX3CR1-203ENST00000412814 EIF4G3O43432 1585 aaKnown RBP27■■□□□ 1.91
CX3CR1-203ENST00000412814 EEA1Q15075 1411 aa26.99■■□□□ 1.91
CX3CR1-203ENST00000412814 ABCA5Q8WWZ7 1642 aa26.98■■□□□ 1.91
CX3CR1-203ENST00000412814 ERICH3Q5RHP9 1530 aa26.92■■□□□ 1.9
CX3CR1-203ENST00000412814 IGF1RP08069 1367 aa26.88■■□□□ 1.89
CX3CR1-203ENST00000412814 PBRM1Q86U86 1689 aa26.87■■□□□ 1.89
CX3CR1-203ENST00000412814 CSRNP3Q8WYN3 585 aa26.87■■□□□ 1.89
CX3CR1-203ENST00000412814 MAGI1Q96QZ7 1491 aaPredicted RBP26.87■■□□□ 1.89
CX3CR1-203ENST00000412814 RUSC2Q8N2Y8 1516 aa26.84■■□□□ 1.89
CX3CR1-203ENST00000412814 FAM9AQ8IZU1 332 aaPredicted RBP26.83■■□□□ 1.89
CX3CR1-203ENST00000412814 CHMP7Q8WUX9 453 aaPredicted RBP26.81■■□□□ 1.88
CX3CR1-203ENST00000412814 SNAPC4Q5SXM2 1469 aa26.81■■□□□ 1.88
CX3CR1-203ENST00000412814 FHAD1B1AJZ9 1412 aa26.79■■□□□ 1.88
CX3CR1-203ENST00000412814 CUL7Q14999 1698 aa26.77■■□□□ 1.88
CX3CR1-203ENST00000412814 CARMIL1Q5VZK9 1371 aa26.77■■□□□ 1.88
CX3CR1-203ENST00000412814 FBLN2P98095 1184 aa26.77■■□□□ 1.88
CX3CR1-203ENST00000412814 SYNJ2O15056 1496 aa26.74■■□□□ 1.87
CX3CR1-203ENST00000412814 ADAMTS12P58397 1594 aa26.68■■□□□ 1.86
CX3CR1-203ENST00000412814 RAPGEF2Q9Y4G8 1499 aa26.66■■□□□ 1.86
CX3CR1-203ENST00000412814 OSCARQ8IYS5 282 aa26.63■■□□□ 1.85
CX3CR1-203ENST00000412814 PRXQ9BXM0 1461 aa26.62■■□□□ 1.85
CX3CR1-203ENST00000412814 GRIN2AQ12879 1464 aa26.6■■□□□ 1.85
CX3CR1-203ENST00000412814 CHD1O14646 1710 aa26.56■■□□□ 1.84
CX3CR1-203ENST00000412814 KIF21BO75037 1637 aa26.53■■□□□ 1.84
CX3CR1-203ENST00000412814 UBTFP17480 764 aaKnown RBP26.48■■□□□ 1.83
CX3CR1-203ENST00000412814 GOLGA3Q08378 1498 aa26.47■■□□□ 1.83
CX3CR1-203ENST00000412814 NUP160Q12769 1436 aa26.45■■□□□ 1.82
CX3CR1-203ENST00000412814 KIAA0586Q9BVV6 1533 aa26.39■■□□□ 1.82
CX3CR1-203ENST00000412814 EHMT2Q96KQ7 1210 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms