RNA–Protein interactions for RNA: ENST00000412788.5

H19-203, H19, imprinted maternally expressed transcript, humanhuman

TSL 1 (best)

Gene H19, Length 2,281 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H19-203ENST00000412788 NISCHQ9Y2I1 1504 aa45.65■■■■■ 4.9
H19-203ENST00000412788 CCDC180Q9P1Z9 1646 aa39.27■■■■□ 3.88
H19-203ENST00000412788 ZCCHC6Q5VYS8 1495 aaKnown RBP38.5■■■■□ 3.75
H19-203ENST00000412788 SHROOM4Q9ULL8 1493 aa38.12■■■■□ 3.69
H19-203ENST00000412788 DCAF8L2P0C7V8 631 aa37.71■■■■□ 3.63
H19-203ENST00000412788 DCAF1Q9Y4B6 1507 aa37.59■■■■□ 3.61
H19-203ENST00000412788 SUPT5HO00267 1087 aaKnown RBP37.05■■■■□ 3.52
H19-203ENST00000412788 MYO15BQ96JP2 1530 aa36.8■■■■□ 3.48
H19-203ENST00000412788 ABCC9O60706 1549 aa36.71■■■■□ 3.47
H19-203ENST00000412788 SCRIBQ14160 1630 aa36.48■■■■□ 3.43
H19-203ENST00000412788 NACADO15069 1562 aa36.42■■■■□ 3.42
H19-203ENST00000412788 RB1CC1Q8TDY2 1594 aa35.94■■■■□ 3.34
H19-203ENST00000412788 RSF1Q96T23 1441 aaPredicted RBP35.81■■■■□ 3.32
H19-203ENST00000412788 CHIC1Q5VXU3 224 aa35.81■■■■□ 3.32
H19-203ENST00000412788 CECR2Q9BXF3 1484 aa35.56■■■■□ 3.28
H19-203ENST00000412788 MROH2BQ7Z745 1585 aa35.4■■■■□ 3.26
H19-203ENST00000412788 UNC13AQ9UPW8 1703 aa35.38■■■■□ 3.25
H19-203ENST00000412788 WIZO95785 1651 aa35.16■■■■□ 3.22
H19-203ENST00000412788 BAZ1AQ9NRL2 1556 aaPredicted RBP35.13■■■■□ 3.21
H19-203ENST00000412788 BICRAQ9NZM4 1560 aa34.98■■■■□ 3.19
H19-203ENST00000412788 SMARCA4P51532 1647 aa34.92■■■■□ 3.18
H19-203ENST00000412788 PABPN1Q86U42 306 aaKnown RBP eCLIP34.89■■■■□ 3.18
H19-203ENST00000412788 TOP2AP11388 1531 aaKnown RBP34.69■■■■□ 3.14
H19-203ENST00000412788 TRIM41Q8WV44 630 aa34.65■■■■□ 3.14
H19-203ENST00000412788 LOC105371045A0A1W2PR82 267 aa34.61■■■■□ 3.13
H19-203ENST00000412788 EIF4G1Q04637 1599 aaKnown RBP34.5■■■■□ 3.11
H19-203ENST00000412788 CCDC88BA6NC98 1476 aa34.45■■■■□ 3.11
H19-203ENST00000412788 SMARCA2P51531 1590 aa34.45■■■■□ 3.11
H19-203ENST00000412788 PEG3Q9GZU2 1588 aa34.37■■■■□ 3.09
H19-203ENST00000412788 FAM9AQ8IZU1 332 aaPredicted RBP34.21■■■■□ 3.07
H19-203ENST00000412788 ATAD2BQ9ULI0 1458 aa34.17■■■■□ 3.06
H19-203ENST00000412788 ABCC8Q09428 1581 aa34.08■■■■□ 3.05
H19-203ENST00000412788 BAZ1BQ9UIG0 1483 aaKnown RBP34.01■■■■□ 3.04
H19-203ENST00000412788 PCGF6Q9BYE7 350 aa33.96■■■■□ 3.03
H19-203ENST00000412788 EHMT2Q96KQ7 1210 aa33.83■■■■□ 3.01
H19-203ENST00000412788 HRCP23327 699 aa33.79■■■■□ 3
H19-203ENST00000412788 NCAPD3P42695 1498 aa33.67■■■□□ 2.98
H19-203ENST00000412788 HMGXB3Q12766 1538 aa33.65■■■□□ 2.98
H19-203ENST00000412788 WRNQ14191 1432 aaPredicted RBP eCLIP33.64■■■□□ 2.98
H19-203ENST00000412788 SOGA1O94964 1423 aa33.61■■■□□ 2.97
H19-203ENST00000412788 SYNJ1O43426 1573 aa33.52■■■□□ 2.96
H19-203ENST00000412788 TRIM26Q12899 539 aaPredicted RBP33.49■■■□□ 2.95
H19-203ENST00000412788 RUSC2Q8N2Y8 1516 aa33.47■■■□□ 2.95
H19-203ENST00000412788 EEA1Q15075 1411 aa33.45■■■□□ 2.95
H19-203ENST00000412788 CSRNP3Q8WYN3 585 aa33.36■■■□□ 2.93
H19-203ENST00000412788 TOP2BQ02880 1626 aa33.23■■■□□ 2.91
H19-203ENST00000412788 TNIKQ9UKE5 1360 aa33.19■■■□□ 2.9
H19-203ENST00000412788 CFTRP13569 1480 aa33.19■■■□□ 2.9
H19-203ENST00000412788 CC2D2AQ9P2K1 1620 aa33.15■■■□□ 2.9
H19-203ENST00000412788 BIVM-ERCC5R4GMW8 1640 aa33.15■■■□□ 2.9
H19-203ENST00000412788 CEP162Q5TB80 1403 aa33.15■■■□□ 2.9
H19-203ENST00000412788 GOLGA3Q08378 1498 aa33.13■■■□□ 2.89
H19-203ENST00000412788 PPARGC1BQ86YN6 1023 aaKnown RBP33.09■■■□□ 2.89
H19-203ENST00000412788 UBTFP17480 764 aaKnown RBP33.07■■■□□ 2.88
H19-203ENST00000412788 KIF21BO75037 1637 aa33.04■■■□□ 2.88
H19-203ENST00000412788 CEP164Q9UPV0 1460 aa33.03■■■□□ 2.88
H19-203ENST00000412788 CUX1P39880 1505 aa33.02■■■□□ 2.88
H19-203ENST00000412788 PRDM2Q13029 1718 aa32.96■■■□□ 2.87
H19-203ENST00000412788 CADPSQ9ULU8 1353 aa32.92■■■□□ 2.86
H19-203ENST00000412788 RAPGEF2Q9Y4G8 1499 aa32.86■■■□□ 2.85
H19-203ENST00000412788 PRXQ9BXM0 1461 aa32.69■■■□□ 2.82
H19-203ENST00000412788 CLIP1P30622 1438 aa32.69■■■□□ 2.82
H19-203ENST00000412788 KIF27Q86VH2 1401 aa32.68■■■□□ 2.82
H19-203ENST00000412788 ERICH3Q5RHP9 1530 aa32.64■■■□□ 2.82
H19-203ENST00000412788 ZEB1P37275 1124 aaPredicted RBP32.59■■■□□ 2.81
H19-203ENST00000412788 FANCD2Q9BXW9 1451 aa32.58■■■□□ 2.81
H19-203ENST00000412788 TTBK1Q5TCY1 1321 aaPredicted RBP32.57■■■□□ 2.8
H19-203ENST00000412788 FGD5Q6ZNL6 1462 aa32.53■■■□□ 2.8
H19-203ENST00000412788 NESP48681 1621 aa32.52■■■□□ 2.8
H19-203ENST00000412788 VPS8Q8N3P4 1428 aa32.48■■■□□ 2.79
H19-203ENST00000412788 CUX2O14529 1486 aa32.48■■■□□ 2.79
H19-203ENST00000412788 RANGAP1P46060 587 aaPredicted RBP32.47■■■□□ 2.79
H19-203ENST00000412788 IGF1RP08069 1367 aa32.38■■■□□ 2.77
H19-203ENST00000412788 DNMBPQ6XZF7 1577 aa32.38■■■□□ 2.77
H19-203ENST00000412788 LAMC3Q9Y6N6 1575 aa32.36■■■□□ 2.77
H19-203ENST00000412788 DNAJC5BQ9UF47 199 aa32.35■■■□□ 2.77
H19-203ENST00000412788 TOPBP1Q92547 1522 aa32.32■■■□□ 2.76
H19-203ENST00000412788 ARAP1Q96P48 1450 aa32.28■■■□□ 2.76
H19-203ENST00000412788 POLA1P09884 1462 aaPredicted RBP32.25■■■□□ 2.75
H19-203ENST00000412788 RAD54L2Q9Y4B4 1467 aa32.24■■■□□ 2.75
H19-203ENST00000412788 CARMIL1Q5VZK9 1371 aa32.22■■■□□ 2.75
H19-203ENST00000412788 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.21■■■□□ 2.75
H19-203ENST00000412788 ABCA10Q8WWZ4 1543 aa32.18■■■□□ 2.74
H19-203ENST00000412788 APLP2Q06481 763 aa32.18■■■□□ 2.74
H19-203ENST00000412788 URB2Q14146 1524 aaKnown RBP32.17■■■□□ 2.74
H19-203ENST00000412788 ARHGAP35Q9NRY4 1499 aa32.12■■■□□ 2.73
H19-203ENST00000412788 PDS5BQ9NTI5 1447 aa32.12■■■□□ 2.73
H19-203ENST00000412788 CCER1Q8TC90 406 aaPredicted RBP32.09■■■□□ 2.73
H19-203ENST00000412788 KIF21AQ7Z4S6 1674 aa32.03■■■□□ 2.72
H19-203ENST00000412788 WDR97A6NE52 1622 aa31.99■■■□□ 2.71
H19-203ENST00000412788 CUL7Q14999 1698 aa31.91■■■□□ 2.7
H19-203ENST00000412788 KANK4Q5T7N3 995 aaPredicted RBP31.91■■■□□ 2.7
H19-203ENST00000412788 HNRNPUL2Q1KMD3 747 aaKnown RBP31.88■■■□□ 2.69
H19-203ENST00000412788 ABCA5Q8WWZ7 1642 aa31.86■■■□□ 2.69
H19-203ENST00000412788 TDRD9Q8NDG6 1382 aaKnown RBP31.86■■■□□ 2.69
H19-203ENST00000412788 GAPVD1Q14C86 1478 aa31.79■■■□□ 2.68
H19-203ENST00000412788 TARBP1Q13395 1621 aaKnown RBP31.76■■■□□ 2.67
H19-203ENST00000412788 CTTNBP2Q8WZ74 1663 aa31.72■■■□□ 2.67
H19-203ENST00000412788 P3H3Q8IVL6 736 aa31.68■■■□□ 2.66
H19-203ENST00000412788 MRC2Q9UBG0 1479 aa31.68■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms