RNA–Protein interactions for RNA: ENST00000412590.6

SSX6-202, Transcript of Putative protein SSX6, humanhuman

TSL 2 BASIC

Gene SSX6, Length 1,461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX6-202ENST00000412590 NISCHQ9Y2I1 1504 aa24.07■■□□□ 1.44
SSX6-202ENST00000412590 AEBP2Q6ZN18 517 aaPredicted RBP23.3■■□□□ 1.32
SSX6-202ENST00000412590 CHIC1Q5VXU3 224 aa22.92■■□□□ 1.26
SSX6-202ENST00000412590 CCDC180Q9P1Z9 1646 aa21.4■■□□□ 1.02
SSX6-202ENST00000412590 ABCC9O60706 1549 aa20.77■□□□□ 0.92
SSX6-202ENST00000412590 PHF23Q9BUL5 403 aaPredicted RBP20.21■□□□□ 0.83
SSX6-202ENST00000412590 NACADO15069 1562 aa20.09■□□□□ 0.81
SSX6-202ENST00000412590 RB1CC1Q8TDY2 1594 aa20.08■□□□□ 0.81
SSX6-202ENST00000412590 ZCCHC6Q5VYS8 1495 aaKnown RBP20.08■□□□□ 0.8
SSX6-202ENST00000412590 DCAF8L2P0C7V8 631 aa20.05■□□□□ 0.8
SSX6-202ENST00000412590 MYO15BQ96JP2 1530 aa20■□□□□ 0.79
SSX6-202ENST00000412590 DCAF1Q9Y4B6 1507 aa19.95■□□□□ 0.78
SSX6-202ENST00000412590 SENP3Q9H4L4 574 aaPredicted RBP19.7■□□□□ 0.74
SSX6-202ENST00000412590 UNC13AQ9UPW8 1703 aa19.61■□□□□ 0.73
SSX6-202ENST00000412590 SCRIBQ14160 1630 aa19.49■□□□□ 0.71
SSX6-202ENST00000412590 BICRAQ9NZM4 1560 aa19.42■□□□□ 0.7
SSX6-202ENST00000412590 PABPN1Q86U42 306 aaKnown RBP eCLIP19.4■□□□□ 0.7
SSX6-202ENST00000412590 SHROOM4Q9ULL8 1493 aa19.3■□□□□ 0.68
SSX6-202ENST00000412590 EIF4G1Q04637 1599 aaKnown RBP18.92■□□□□ 0.62
SSX6-202ENST00000412590 DNAJC5BQ9UF47 199 aa18.9■□□□□ 0.62
SSX6-202ENST00000412590 CC2D2AQ9P2K1 1620 aa18.81■□□□□ 0.6
SSX6-202ENST00000412590 CECR2Q9BXF3 1484 aa18.69■□□□□ 0.58
SSX6-202ENST00000412590 PLPPR3Q6T4P5 718 aa18.69■□□□□ 0.58
SSX6-202ENST00000412590 BAZ1AQ9NRL2 1556 aaPredicted RBP18.68■□□□□ 0.58
SSX6-202ENST00000412590 SMARCA4P51532 1647 aa18.66■□□□□ 0.58
SSX6-202ENST00000412590 SMARCA2P51531 1590 aa18.54■□□□□ 0.56
SSX6-202ENST00000412590 MROH2BQ7Z745 1585 aa18.53■□□□□ 0.56
SSX6-202ENST00000412590 ATAD2BQ9ULI0 1458 aa18.52■□□□□ 0.56
SSX6-202ENST00000412590 NCAPD3P42695 1498 aa18.5■□□□□ 0.55
SSX6-202ENST00000412590 PEG3Q9GZU2 1588 aa18.49■□□□□ 0.55
SSX6-202ENST00000412590 HMGXB3Q12766 1538 aa18.45■□□□□ 0.54
SSX6-202ENST00000412590 BAZ1BQ9UIG0 1483 aaKnown RBP18.4■□□□□ 0.54
SSX6-202ENST00000412590 RSF1Q96T23 1441 aaPredicted RBP18.36■□□□□ 0.53
SSX6-202ENST00000412590 WIZO95785 1651 aa18.35■□□□□ 0.53
SSX6-202ENST00000412590 FOXD1Q16676 465 aa18.29■□□□□ 0.52
SSX6-202ENST00000412590 TOP2AP11388 1531 aaKnown RBP18.18■□□□□ 0.5
SSX6-202ENST00000412590 LAMC3Q9Y6N6 1575 aa18.03■□□□□ 0.48
SSX6-202ENST00000412590 NESP48681 1621 aa17.99■□□□□ 0.47
SSX6-202ENST00000412590 SUPT5HO00267 1087 aaKnown RBP17.97■□□□□ 0.47
SSX6-202ENST00000412590 CADPSQ9ULU8 1353 aa17.97■□□□□ 0.47
SSX6-202ENST00000412590 CCDC88BA6NC98 1476 aa17.94■□□□□ 0.46
SSX6-202ENST00000412590 ERCC6Q03468 1493 aa17.93■□□□□ 0.46
SSX6-202ENST00000412590 PDS5BQ9NTI5 1447 aa17.9■□□□□ 0.46
SSX6-202ENST00000412590 CFTRP13569 1480 aa17.89■□□□□ 0.45
SSX6-202ENST00000412590 KIF21AQ7Z4S6 1674 aa17.82■□□□□ 0.44
SSX6-202ENST00000412590 PRDM2Q13029 1718 aa17.81■□□□□ 0.44
SSX6-202ENST00000412590 PPP6R1Q9UPN7 881 aa17.78■□□□□ 0.44
SSX6-202ENST00000412590 ADRA2BP18089 450 aa17.77■□□□□ 0.44
SSX6-202ENST00000412590 FANCD2Q9BXW9 1451 aa17.77■□□□□ 0.43
SSX6-202ENST00000412590 CEP164Q9UPV0 1460 aa17.75■□□□□ 0.43
SSX6-202ENST00000412590 THOC2Q8NI27 1593 aaKnown RBP17.73■□□□□ 0.43
SSX6-202ENST00000412590 CUX2O14529 1486 aa17.71■□□□□ 0.43
SSX6-202ENST00000412590 MRC2Q9UBG0 1479 aa17.69■□□□□ 0.42
SSX6-202ENST00000412590 WDR62O43379 1518 aa17.63■□□□□ 0.41
SSX6-202ENST00000412590 URB2Q14146 1524 aaKnown RBP17.56■□□□□ 0.4
SSX6-202ENST00000412590 ABCC8Q09428 1581 aa17.54■□□□□ 0.4
SSX6-202ENST00000412590 DNMBPQ6XZF7 1577 aa17.5■□□□□ 0.39
SSX6-202ENST00000412590 TOPBP1Q92547 1522 aa17.49■□□□□ 0.39
SSX6-202ENST00000412590 CUX1P39880 1505 aa17.39■□□□□ 0.37
SSX6-202ENST00000412590 IFT140Q96RY7 1462 aa17.37■□□□□ 0.37
SSX6-202ENST00000412590 POLA1P09884 1462 aaPredicted RBP17.34■□□□□ 0.37
SSX6-202ENST00000412590 WRNQ14191 1432 aaPredicted RBP eCLIP17.33■□□□□ 0.37
SSX6-202ENST00000412590 FGD5Q6ZNL6 1462 aa17.32■□□□□ 0.36
SSX6-202ENST00000412590 TOP2BQ02880 1626 aa17.29■□□□□ 0.36
SSX6-202ENST00000412590 TARBP1Q13395 1621 aaKnown RBP17.29■□□□□ 0.36
SSX6-202ENST00000412590 BIVM-ERCC5R4GMW8 1640 aa17.29■□□□□ 0.36
SSX6-202ENST00000412590 PIAS4Q8N2W9 510 aaPredicted RBP17.28■□□□□ 0.36
SSX6-202ENST00000412590 SOGA1O94964 1423 aa17.28■□□□□ 0.36
SSX6-202ENST00000412590 SYNJ1O43426 1573 aa17.26■□□□□ 0.35
SSX6-202ENST00000412590 RAD54L2Q9Y4B4 1467 aa17.25■□□□□ 0.35
SSX6-202ENST00000412590 ZNF608Q9ULD9 1512 aaPredicted RBP17.24■□□□□ 0.35
SSX6-202ENST00000412590 WDR97A6NE52 1622 aa17.22■□□□□ 0.35
SSX6-202ENST00000412590 EIF4G3O43432 1585 aaKnown RBP17.21■□□□□ 0.35
SSX6-202ENST00000412590 ABCA10Q8WWZ4 1543 aa17.17■□□□□ 0.34
SSX6-202ENST00000412590 AQRO60306 1485 aaKnown RBP eCLIP17.16■□□□□ 0.34
SSX6-202ENST00000412590 TDRD9Q8NDG6 1382 aaKnown RBP17.15■□□□□ 0.34
SSX6-202ENST00000412590 GAPVD1Q14C86 1478 aa17.1■□□□□ 0.33
SSX6-202ENST00000412590 ABCA5Q8WWZ7 1642 aa17.09■□□□□ 0.33
SSX6-202ENST00000412590 GRIN2BQ13224 1484 aa17.08■□□□□ 0.32
SSX6-202ENST00000412590 PBRM1Q86U86 1689 aa17.07■□□□□ 0.32
SSX6-202ENST00000412590 MAGI1Q96QZ7 1491 aaPredicted RBP17.04■□□□□ 0.32
SSX6-202ENST00000412590 SNAPC4Q5SXM2 1469 aa17.02■□□□□ 0.32
SSX6-202ENST00000412590 DNAJC5Q9H3Z4 198 aa17■□□□□ 0.31
SSX6-202ENST00000412590 TRIM41Q8WV44 630 aa16.99■□□□□ 0.31
SSX6-202ENST00000412590 ERICH3Q5RHP9 1530 aa16.98■□□□□ 0.31
SSX6-202ENST00000412590 CHD1O14646 1710 aa16.98■□□□□ 0.31
SSX6-202ENST00000412590 OSCARQ8IYS5 282 aa16.98■□□□□ 0.31
SSX6-202ENST00000412590 KIF27Q86VH2 1401 aa16.98■□□□□ 0.31
SSX6-202ENST00000412590 SYNJ2O15056 1496 aa16.95■□□□□ 0.3
SSX6-202ENST00000412590 FBLN2P98095 1184 aa16.95■□□□□ 0.3
SSX6-202ENST00000412590 CHMP7Q8WUX9 453 aaPredicted RBP16.93■□□□□ 0.3
SSX6-202ENST00000412590 ADAMTS12P58397 1594 aa16.92■□□□□ 0.3
SSX6-202ENST00000412590 FHAD1B1AJZ9 1412 aa16.9■□□□□ 0.3
SSX6-202ENST00000412590 CUL7Q14999 1698 aa16.87■□□□□ 0.29
SSX6-202ENST00000412590 GRIN2AQ12879 1464 aa16.86■□□□□ 0.29
SSX6-202ENST00000412590 IGF1RP08069 1367 aa16.86■□□□□ 0.29
SSX6-202ENST00000412590 CLASP1Q7Z460 1538 aa16.79■□□□□ 0.28
SSX6-202ENST00000412590 RUSC2Q8N2Y8 1516 aa16.79■□□□□ 0.28
SSX6-202ENST00000412590 CARMIL1Q5VZK9 1371 aa16.78■□□□□ 0.28
SSX6-202ENST00000412590 NUP160Q12769 1436 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms