RNA–Protein interactions for RNA: ENST00000412528.5

LINC00487-202, long intergenic non-protein coding RNA 487, humanhuman

TSL 3

Gene LINC00487, Length 424 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00487-202ENST00000412528 NISCHQ9Y2I1 1504 aa11.39□□□□□ -0.59
LINC00487-202ENST00000412528 CCDC180Q9P1Z9 1646 aa9.94□□□□□ -0.82
LINC00487-202ENST00000412528 ABCC9O60706 1549 aa9.61□□□□□ -0.87
LINC00487-202ENST00000412528 DCAF8L2P0C7V8 631 aa9.56□□□□□ -0.88
LINC00487-202ENST00000412528 ZCCHC6Q5VYS8 1495 aaKnown RBP9.52□□□□□ -0.89
LINC00487-202ENST00000412528 DCAF1Q9Y4B6 1507 aa9.39□□□□□ -0.91
LINC00487-202ENST00000412528 MYO15BQ96JP2 1530 aa9.33□□□□□ -0.92
LINC00487-202ENST00000412528 NACADO15069 1562 aa9.33□□□□□ -0.92
LINC00487-202ENST00000412528 RB1CC1Q8TDY2 1594 aa9.29□□□□□ -0.92
LINC00487-202ENST00000412528 SHROOM4Q9ULL8 1493 aa9.25□□□□□ -0.93
LINC00487-202ENST00000412528 SCRIBQ14160 1630 aa9.16□□□□□ -0.94
LINC00487-202ENST00000412528 PABPN1Q86U42 306 aaKnown RBP eCLIP9.07□□□□□ -0.96
LINC00487-202ENST00000412528 UNC13AQ9UPW8 1703 aa9□□□□□ -0.97
LINC00487-202ENST00000412528 BICRAQ9NZM4 1560 aa9□□□□□ -0.97
LINC00487-202ENST00000412528 CECR2Q9BXF3 1484 aa8.88□□□□□ -0.99
LINC00487-202ENST00000412528 SUPT5HO00267 1087 aaKnown RBP8.85□□□□□ -0.99
LINC00487-202ENST00000412528 MROH2BQ7Z745 1585 aa8.8□□□□□ -1
LINC00487-202ENST00000412528 BAZ1AQ9NRL2 1556 aaPredicted RBP8.8□□□□□ -1
LINC00487-202ENST00000412528 RSF1Q96T23 1441 aaPredicted RBP8.8□□□□□ -1
LINC00487-202ENST00000412528 SMARCA4P51532 1647 aa8.76□□□□□ -1.01
LINC00487-202ENST00000412528 EIF4G1Q04637 1599 aaKnown RBP8.74□□□□□ -1.01
LINC00487-202ENST00000412528 WIZO95785 1651 aa8.69□□□□□ -1.02
LINC00487-202ENST00000412528 ATAD2BQ9ULI0 1458 aa8.68□□□□□ -1.02
LINC00487-202ENST00000412528 SMARCA2P51531 1590 aa8.65□□□□□ -1.02
LINC00487-202ENST00000412528 CC2D2AQ9P2K1 1620 aa8.65□□□□□ -1.03
LINC00487-202ENST00000412528 PEG3Q9GZU2 1588 aa8.65□□□□□ -1.03
LINC00487-202ENST00000412528 NCAPD3P42695 1498 aa8.64□□□□□ -1.03
LINC00487-202ENST00000412528 DNAJC5BQ9UF47 199 aa8.64□□□□□ -1.03
LINC00487-202ENST00000412528 BAZ1BQ9UIG0 1483 aaKnown RBP8.63□□□□□ -1.03
LINC00487-202ENST00000412528 TOP2AP11388 1531 aaKnown RBP8.6□□□□□ -1.03
LINC00487-202ENST00000412528 CHIC1Q5VXU3 224 aa8.59□□□□□ -1.03
LINC00487-202ENST00000412528 HMGXB3Q12766 1538 aa8.58□□□□□ -1.04
LINC00487-202ENST00000412528 CCDC88BA6NC98 1476 aa8.55□□□□□ -1.04
LINC00487-202ENST00000412528 CADPSQ9ULU8 1353 aa8.42□□□□□ -1.06
LINC00487-202ENST00000412528 CFTRP13569 1480 aa8.39□□□□□ -1.07
LINC00487-202ENST00000412528 NESP48681 1621 aa8.38□□□□□ -1.07
LINC00487-202ENST00000412528 AEBP2Q6ZN18 517 aaPredicted RBP8.36□□□□□ -1.07
LINC00487-202ENST00000412528 TRIM41Q8WV44 630 aa8.34□□□□□ -1.07
LINC00487-202ENST00000412528 LAMC3Q9Y6N6 1575 aa8.34□□□□□ -1.07
LINC00487-202ENST00000412528 PDS5BQ9NTI5 1447 aa8.32□□□□□ -1.08
LINC00487-202ENST00000412528 FANCD2Q9BXW9 1451 aa8.31□□□□□ -1.08
LINC00487-202ENST00000412528 ABCC8Q09428 1581 aa8.31□□□□□ -1.08
LINC00487-202ENST00000412528 WRNQ14191 1432 aaPredicted RBP eCLIP8.29□□□□□ -1.08
LINC00487-202ENST00000412528 CEP164Q9UPV0 1460 aa8.26□□□□□ -1.09
LINC00487-202ENST00000412528 ERCC6Q03468 1493 aa8.25□□□□□ -1.09
LINC00487-202ENST00000412528 PRDM2Q13029 1718 aa8.23□□□□□ -1.09
LINC00487-202ENST00000412528 SYNJ1O43426 1573 aa8.22□□□□□ -1.09
LINC00487-202ENST00000412528 CUX1P39880 1505 aa8.22□□□□□ -1.09
LINC00487-202ENST00000412528 KIF21AQ7Z4S6 1674 aa8.21□□□□□ -1.09
LINC00487-202ENST00000412528 URB2Q14146 1524 aaKnown RBP8.21□□□□□ -1.1
LINC00487-202ENST00000412528 TOP2BQ02880 1626 aa8.2□□□□□ -1.1
LINC00487-202ENST00000412528 MRC2Q9UBG0 1479 aa8.19□□□□□ -1.1
LINC00487-202ENST00000412528 TOPBP1Q92547 1522 aa8.19□□□□□ -1.1
LINC00487-202ENST00000412528 FAM9AQ8IZU1 332 aaPredicted RBP8.19□□□□□ -1.1
LINC00487-202ENST00000412528 DNMBPQ6XZF7 1577 aa8.18□□□□□ -1.1
LINC00487-202ENST00000412528 FGD5Q6ZNL6 1462 aa8.17□□□□□ -1.1
LINC00487-202ENST00000412528 BIVM-ERCC5R4GMW8 1640 aa8.17□□□□□ -1.1
LINC00487-202ENST00000412528 SOGA1O94964 1423 aa8.16□□□□□ -1.1
LINC00487-202ENST00000412528 WDR62O43379 1518 aa8.14□□□□□ -1.11
LINC00487-202ENST00000412528 POLA1P09884 1462 aaPredicted RBP8.14□□□□□ -1.11
LINC00487-202ENST00000412528 RAD54L2Q9Y4B4 1467 aa8.14□□□□□ -1.11
LINC00487-202ENST00000412528 THOC2Q8NI27 1593 aaKnown RBP8.13□□□□□ -1.11
LINC00487-202ENST00000412528 RUSC2Q8N2Y8 1516 aa8.13□□□□□ -1.11
LINC00487-202ENST00000412528 CSRNP3Q8WYN3 585 aa8.11□□□□□ -1.11
LINC00487-202ENST00000412528 CUX2O14529 1486 aa8.11□□□□□ -1.11
LINC00487-202ENST00000412528 KIF27Q86VH2 1401 aa8.1□□□□□ -1.11
LINC00487-202ENST00000412528 TDRD9Q8NDG6 1382 aaKnown RBP8.1□□□□□ -1.11
LINC00487-202ENST00000412528 EHMT2Q96KQ7 1210 aa8.09□□□□□ -1.11
LINC00487-202ENST00000412528 ABCA10Q8WWZ4 1543 aa8.08□□□□□ -1.12
LINC00487-202ENST00000412528 IFT140Q96RY7 1462 aa8.08□□□□□ -1.12
LINC00487-202ENST00000412528 LOC105371045A0A1W2PR82 267 aa8.08□□□□□ -1.12
LINC00487-202ENST00000412528 EEA1Q15075 1411 aa8.08□□□□□ -1.12
LINC00487-202ENST00000412528 TARBP1Q13395 1621 aaKnown RBP8.07□□□□□ -1.12
LINC00487-202ENST00000412528 AQRO60306 1485 aaKnown RBP eCLIP8.06□□□□□ -1.12
LINC00487-202ENST00000412528 IGF1RP08069 1367 aa8.05□□□□□ -1.12
LINC00487-202ENST00000412528 ZNF608Q9ULD9 1512 aaPredicted RBP8.04□□□□□ -1.12
LINC00487-202ENST00000412528 GAPVD1Q14C86 1478 aa8.04□□□□□ -1.12
LINC00487-202ENST00000412528 WDR97A6NE52 1622 aa8.01□□□□□ -1.13
LINC00487-202ENST00000412528 UBTFP17480 764 aaKnown RBP8.01□□□□□ -1.13
LINC00487-202ENST00000412528 CARMIL1Q5VZK9 1371 aa8□□□□□ -1.13
LINC00487-202ENST00000412528 GRIN2BQ13224 1484 aa8□□□□□ -1.13
LINC00487-202ENST00000412528 ABCA5Q8WWZ7 1642 aa8□□□□□ -1.13
LINC00487-202ENST00000412528 PRXQ9BXM0 1461 aa7.99□□□□□ -1.13
LINC00487-202ENST00000412528 EIF4G3O43432 1585 aaKnown RBP7.98□□□□□ -1.13
LINC00487-202ENST00000412528 ERICH3Q5RHP9 1530 aa7.98□□□□□ -1.13
LINC00487-202ENST00000412528 FBLN2P98095 1184 aa7.97□□□□□ -1.13
LINC00487-202ENST00000412528 RAPGEF2Q9Y4G8 1499 aa7.97□□□□□ -1.13
LINC00487-202ENST00000412528 GOLGA3Q08378 1498 aa7.96□□□□□ -1.13
LINC00487-202ENST00000412528 SNAPC4Q5SXM2 1469 aa7.95□□□□□ -1.14
LINC00487-202ENST00000412528 CHMP7Q8WUX9 453 aaPredicted RBP7.95□□□□□ -1.14
LINC00487-202ENST00000412528 KIF21BO75037 1637 aa7.95□□□□□ -1.14
LINC00487-202ENST00000412528 FHAD1B1AJZ9 1412 aa7.95□□□□□ -1.14
LINC00487-202ENST00000412528 RANGAP1P46060 587 aaPredicted RBP7.94□□□□□ -1.14
LINC00487-202ENST00000412528 CUL7Q14999 1698 aa7.93□□□□□ -1.14
LINC00487-202ENST00000412528 PBRM1Q86U86 1689 aa7.93□□□□□ -1.14
LINC00487-202ENST00000412528 TNIKQ9UKE5 1360 aa7.93□□□□□ -1.14
LINC00487-202ENST00000412528 MAGI1Q96QZ7 1491 aaPredicted RBP7.93□□□□□ -1.14
LINC00487-202ENST00000412528 SYNJ2O15056 1496 aa7.91□□□□□ -1.14
LINC00487-202ENST00000412528 ADAMTS12P58397 1594 aa7.91□□□□□ -1.14
LINC00487-202ENST00000412528 GRIN2AQ12879 1464 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms