RNA–Protein interactions for RNA: ENST00000412512.2

KCNC4-202, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 3

Gene KCNC4, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-202ENST00000412512 NISCHQ9Y2I1 1504 aa20.53■□□□□ 0.88
KCNC4-202ENST00000412512 ABCC9O60706 1549 aa18.92■□□□□ 0.62
KCNC4-202ENST00000412512 CCDC180Q9P1Z9 1646 aa18.34■□□□□ 0.53
KCNC4-202ENST00000412512 DNAJC5BQ9UF47 199 aa18.16■□□□□ 0.5
KCNC4-202ENST00000412512 DCAF8L2P0C7V8 631 aa17.71■□□□□ 0.43
KCNC4-202ENST00000412512 PABPN1Q86U42 306 aaKnown RBP eCLIP17.7■□□□□ 0.42
KCNC4-202ENST00000412512 RB1CC1Q8TDY2 1594 aa17.67■□□□□ 0.42
KCNC4-202ENST00000412512 NACADO15069 1562 aa17.48■□□□□ 0.39
KCNC4-202ENST00000412512 UNC13AQ9UPW8 1703 aa17.35■□□□□ 0.37
KCNC4-202ENST00000412512 BICRAQ9NZM4 1560 aa17.3■□□□□ 0.36
KCNC4-202ENST00000412512 MYO15BQ96JP2 1530 aa17.06■□□□□ 0.32
KCNC4-202ENST00000412512 CECR2Q9BXF3 1484 aa16.99■□□□□ 0.31
KCNC4-202ENST00000412512 CC2D2AQ9P2K1 1620 aa16.98■□□□□ 0.31
KCNC4-202ENST00000412512 SCRIBQ14160 1630 aa16.92■□□□□ 0.3
KCNC4-202ENST00000412512 ZCCHC6Q5VYS8 1495 aaKnown RBP16.92■□□□□ 0.3
KCNC4-202ENST00000412512 EIF4G1Q04637 1599 aaKnown RBP16.85■□□□□ 0.29
KCNC4-202ENST00000412512 DCAF1Q9Y4B6 1507 aa16.79■□□□□ 0.28
KCNC4-202ENST00000412512 SHROOM4Q9ULL8 1493 aa16.73■□□□□ 0.27
KCNC4-202ENST00000412512 DNAJC5Q9H3Z4 198 aa16.69■□□□□ 0.26
KCNC4-202ENST00000412512 ERCC6Q03468 1493 aa16.24■□□□□ 0.19
KCNC4-202ENST00000412512 NCAPD3P42695 1498 aa16.22■□□□□ 0.19
KCNC4-202ENST00000412512 NESP48681 1621 aa16.21■□□□□ 0.19
KCNC4-202ENST00000412512 CUX2O14529 1486 aa16.2■□□□□ 0.18
KCNC4-202ENST00000412512 ATAD2BQ9ULI0 1458 aa16.18■□□□□ 0.18
KCNC4-202ENST00000412512 SMARCA4P51532 1647 aa16.04■□□□□ 0.16
KCNC4-202ENST00000412512 SMARCA2P51531 1590 aa15.99■□□□□ 0.15
KCNC4-202ENST00000412512 HMGXB3Q12766 1538 aa15.98■□□□□ 0.15
KCNC4-202ENST00000412512 BAZ1BQ9UIG0 1483 aaKnown RBP15.97■□□□□ 0.15
KCNC4-202ENST00000412512 TRIM41Q8WV44 630 aa15.96■□□□□ 0.15
KCNC4-202ENST00000412512 THOC2Q8NI27 1593 aaKnown RBP15.92■□□□□ 0.14
KCNC4-202ENST00000412512 MROH2BQ7Z745 1585 aa15.91■□□□□ 0.14
KCNC4-202ENST00000412512 BAZ1AQ9NRL2 1556 aaPredicted RBP15.87■□□□□ 0.13
KCNC4-202ENST00000412512 KIF21AQ7Z4S6 1674 aa15.85■□□□□ 0.13
KCNC4-202ENST00000412512 LAMC3Q9Y6N6 1575 aa15.81■□□□□ 0.12
KCNC4-202ENST00000412512 PEG3Q9GZU2 1588 aa15.8■□□□□ 0.12
KCNC4-202ENST00000412512 PDS5BQ9NTI5 1447 aa15.78■□□□□ 0.12
KCNC4-202ENST00000412512 CADPSQ9ULU8 1353 aa15.75■□□□□ 0.11
KCNC4-202ENST00000412512 WIZO95785 1651 aa15.69■□□□□ 0.1
KCNC4-202ENST00000412512 MRC2Q9UBG0 1479 aa15.68■□□□□ 0.1
KCNC4-202ENST00000412512 WDR62O43379 1518 aa15.63■□□□□ 0.09
KCNC4-202ENST00000412512 OSCARQ8IYS5 282 aa15.57■□□□□ 0.08
KCNC4-202ENST00000412512 FANCD2Q9BXW9 1451 aa15.57■□□□□ 0.08
KCNC4-202ENST00000412512 CEP164Q9UPV0 1460 aa15.56■□□□□ 0.08
KCNC4-202ENST00000412512 URB2Q14146 1524 aaKnown RBP15.5■□□□□ 0.07
KCNC4-202ENST00000412512 CFTRP13569 1480 aa15.48■□□□□ 0.07
KCNC4-202ENST00000412512 RSF1Q96T23 1441 aaPredicted RBP15.47■□□□□ 0.07
KCNC4-202ENST00000412512 ZNF608Q9ULD9 1512 aaPredicted RBP15.41■□□□□ 0.06
KCNC4-202ENST00000412512 RIMBP3CA6NJZ7 1639 aa15.35■□□□□ 0.05
KCNC4-202ENST00000412512 RIMBP3BA6NNM3 1639 aa15.35■□□□□ 0.05
KCNC4-202ENST00000412512 RIMBP3Q9UFD9 1639 aa15.35■□□□□ 0.05
KCNC4-202ENST00000412512 TOP2AP11388 1531 aaKnown RBP15.35■□□□□ 0.05
KCNC4-202ENST00000412512 CYB5RLQ6IPT4 315 aa15.34■□□□□ 0.05
KCNC4-202ENST00000412512 CCDC88BA6NC98 1476 aa15.31■□□□□ 0.04
KCNC4-202ENST00000412512 ARHGEF11O15085 1522 aa15.27■□□□□ 0.04
KCNC4-202ENST00000412512 AQRO60306 1485 aaKnown RBP eCLIP15.26■□□□□ 0.03
KCNC4-202ENST00000412512 FBLN2P98095 1184 aa15.25■□□□□ 0.03
KCNC4-202ENST00000412512 TOPBP1Q92547 1522 aa15.25■□□□□ 0.03
KCNC4-202ENST00000412512 IFT140Q96RY7 1462 aa15.24■□□□□ 0.03
KCNC4-202ENST00000412512 TRHP20396 242 aaPredicted RBP15.23■□□□□ 0.03
KCNC4-202ENST00000412512 EIF4G3O43432 1585 aaKnown RBP15.17■□□□□ 0.02
KCNC4-202ENST00000412512 PRDM2Q13029 1718 aa15.14■□□□□ 0.01
KCNC4-202ENST00000412512 ARAP1Q96P48 1450 aa15.14■□□□□ 0.01
KCNC4-202ENST00000412512 RAD54L2Q9Y4B4 1467 aa15.14■□□□□ 0.01
KCNC4-202ENST00000412512 TDRD9Q8NDG6 1382 aaKnown RBP15.13■□□□□ 0.01
KCNC4-202ENST00000412512 CHD1O14646 1710 aa15.12■□□□□ 0.01
KCNC4-202ENST00000412512 TARBP1Q13395 1621 aaKnown RBP15.1■□□□□ 0.01
KCNC4-202ENST00000412512 DNMBPQ6XZF7 1577 aa15.09■□□□□ 0.01
KCNC4-202ENST00000412512 POLA1P09884 1462 aaPredicted RBP15.08■□□□□ 0.01
KCNC4-202ENST00000412512 SOGA1O94964 1423 aa15.05■□□□□ -0
KCNC4-202ENST00000412512 ABCC8Q09428 1581 aa15.05■□□□□ -0
KCNC4-202ENST00000412512 CHMP7Q8WUX9 453 aaPredicted RBP15□□□□□ -0.01
KCNC4-202ENST00000412512 SNAPC4Q5SXM2 1469 aa15□□□□□ -0.01
KCNC4-202ENST00000412512 FGD5Q6ZNL6 1462 aa14.96□□□□□ -0.01
KCNC4-202ENST00000412512 CUX1P39880 1505 aa14.92□□□□□ -0.02
KCNC4-202ENST00000412512 CLASP1Q7Z460 1538 aa14.92□□□□□ -0.02
KCNC4-202ENST00000412512 AEBP2Q6ZN18 517 aaPredicted RBP14.91□□□□□ -0.02
KCNC4-202ENST00000412512 GRIN2BQ13224 1484 aa14.86□□□□□ -0.03
KCNC4-202ENST00000412512 SYNJ1O43426 1573 aa14.84□□□□□ -0.03
KCNC4-202ENST00000412512 ERCC6L2Q5T890 1561 aa14.84□□□□□ -0.03
KCNC4-202ENST00000412512 SYNJ2O15056 1496 aa14.83□□□□□ -0.03
KCNC4-202ENST00000412512 GAPVD1Q14C86 1478 aa14.83□□□□□ -0.03
KCNC4-202ENST00000412512 MAGI1Q96QZ7 1491 aaPredicted RBP14.83□□□□□ -0.03
KCNC4-202ENST00000412512 SUPT5HO00267 1087 aaKnown RBP14.77□□□□□ -0.05
KCNC4-202ENST00000412512 WDR97A6NE52 1622 aa14.76□□□□□ -0.05
KCNC4-202ENST00000412512 PBRM1Q86U86 1689 aa14.74□□□□□ -0.05
KCNC4-202ENST00000412512 ABCA10Q8WWZ4 1543 aa14.71□□□□□ -0.05
KCNC4-202ENST00000412512 ABCA5Q8WWZ7 1642 aa14.7□□□□□ -0.06
KCNC4-202ENST00000412512 GRIN2AQ12879 1464 aa14.69□□□□□ -0.06
KCNC4-202ENST00000412512 CEP170Q5SW79 1584 aa14.68□□□□□ -0.06
KCNC4-202ENST00000412512 NUP160Q12769 1436 aa14.64□□□□□ -0.07
KCNC4-202ENST00000412512 WRNQ14191 1432 aaPredicted RBP eCLIP14.62□□□□□ -0.07
KCNC4-202ENST00000412512 JPH4Q96JJ6 628 aa14.61□□□□□ -0.07
KCNC4-202ENST00000412512 ADAMTS12P58397 1594 aa14.6□□□□□ -0.07
KCNC4-202ENST00000412512 PRG4Q92954 1404 aaPredicted RBP14.59□□□□□ -0.07
KCNC4-202ENST00000412512 FAM69CQ0P6D2 419 aa14.58□□□□□ -0.08
KCNC4-202ENST00000412512 FHAD1B1AJZ9 1412 aa14.58□□□□□ -0.08
KCNC4-202ENST00000412512 SHROOM2Q13796 1616 aa14.55□□□□□ -0.08
KCNC4-202ENST00000412512 KIF13AQ9H1H9 1805 aa14.55□□□□□ -0.08
KCNC4-202ENST00000412512 TTBK1Q5TCY1 1321 aaPredicted RBP14.52□□□□□ -0.08
KCNC4-202ENST00000412512 TOP2BQ02880 1626 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms