RNA–Protein interactions for RNA: ENST00000411844.1

CLUHP3-202, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 2

Gene CLUHP3, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-202ENST00000411844 NISCHQ9Y2I1 1504 aa26.54■■□□□ 1.84
CLUHP3-202ENST00000411844 CCDC180Q9P1Z9 1646 aa23.22■■□□□ 1.31
CLUHP3-202ENST00000411844 ZCCHC6Q5VYS8 1495 aaKnown RBP22.3■■□□□ 1.16
CLUHP3-202ENST00000411844 DCAF1Q9Y4B6 1507 aa22.06■■□□□ 1.12
CLUHP3-202ENST00000411844 MYO15BQ96JP2 1530 aa21.85■■□□□ 1.09
CLUHP3-202ENST00000411844 ABCC9O60706 1549 aa21.8■■□□□ 1.08
CLUHP3-202ENST00000411844 DCAF8L2P0C7V8 631 aa21.71■■□□□ 1.07
CLUHP3-202ENST00000411844 NACADO15069 1562 aa21.64■■□□□ 1.05
CLUHP3-202ENST00000411844 RB1CC1Q8TDY2 1594 aa21.43■■□□□ 1.02
CLUHP3-202ENST00000411844 SHROOM4Q9ULL8 1493 aa21.39■■□□□ 1.01
CLUHP3-202ENST00000411844 SCRIBQ14160 1630 aa21.18■□□□□ 0.98
CLUHP3-202ENST00000411844 UNC13AQ9UPW8 1703 aa20.84■□□□□ 0.93
CLUHP3-202ENST00000411844 BICRAQ9NZM4 1560 aa20.72■□□□□ 0.91
CLUHP3-202ENST00000411844 SUPT5HO00267 1087 aaKnown RBP20.6■□□□□ 0.89
CLUHP3-202ENST00000411844 RSF1Q96T23 1441 aaPredicted RBP20.53■□□□□ 0.88
CLUHP3-202ENST00000411844 BAZ1AQ9NRL2 1556 aaPredicted RBP20.52■□□□□ 0.88
CLUHP3-202ENST00000411844 CECR2Q9BXF3 1484 aa20.52■□□□□ 0.88
CLUHP3-202ENST00000411844 PABPN1Q86U42 306 aaKnown RBP eCLIP20.5■□□□□ 0.87
CLUHP3-202ENST00000411844 MROH2BQ7Z745 1585 aa20.43■□□□□ 0.86
CLUHP3-202ENST00000411844 SMARCA4P51532 1647 aa20.38■□□□□ 0.85
CLUHP3-202ENST00000411844 WIZO95785 1651 aa20.22■□□□□ 0.83
CLUHP3-202ENST00000411844 PEG3Q9GZU2 1588 aa20.22■□□□□ 0.83
CLUHP3-202ENST00000411844 TOP2AP11388 1531 aaKnown RBP20.13■□□□□ 0.81
CLUHP3-202ENST00000411844 SMARCA2P51531 1590 aa20.12■□□□□ 0.81
CLUHP3-202ENST00000411844 EIF4G1Q04637 1599 aaKnown RBP20.1■□□□□ 0.81
CLUHP3-202ENST00000411844 ATAD2BQ9ULI0 1458 aa20.06■□□□□ 0.8
CLUHP3-202ENST00000411844 NCAPD3P42695 1498 aa19.96■□□□□ 0.79
CLUHP3-202ENST00000411844 BAZ1BQ9UIG0 1483 aaKnown RBP19.94■□□□□ 0.78
CLUHP3-202ENST00000411844 HMGXB3Q12766 1538 aa19.94■□□□□ 0.78
CLUHP3-202ENST00000411844 CCDC88BA6NC98 1476 aa19.86■□□□□ 0.77
CLUHP3-202ENST00000411844 CC2D2AQ9P2K1 1620 aa19.78■□□□□ 0.76
CLUHP3-202ENST00000411844 CHIC1Q5VXU3 224 aa19.78■□□□□ 0.76
CLUHP3-202ENST00000411844 CFTRP13569 1480 aa19.48■□□□□ 0.71
CLUHP3-202ENST00000411844 TRIM41Q8WV44 630 aa19.46■□□□□ 0.71
CLUHP3-202ENST00000411844 CADPSQ9ULU8 1353 aa19.41■□□□□ 0.7
CLUHP3-202ENST00000411844 ABCC8Q09428 1581 aa19.36■□□□□ 0.69
CLUHP3-202ENST00000411844 PRDM2Q13029 1718 aa19.35■□□□□ 0.69
CLUHP3-202ENST00000411844 WRNQ14191 1432 aaPredicted RBP eCLIP19.34■□□□□ 0.69
CLUHP3-202ENST00000411844 LAMC3Q9Y6N6 1575 aa19.27■□□□□ 0.68
CLUHP3-202ENST00000411844 SYNJ1O43426 1573 aa19.21■□□□□ 0.67
CLUHP3-202ENST00000411844 TOP2BQ02880 1626 aa19.21■□□□□ 0.67
CLUHP3-202ENST00000411844 BIVM-ERCC5R4GMW8 1640 aa19.2■□□□□ 0.66
CLUHP3-202ENST00000411844 DNAJC5BQ9UF47 199 aa19.19■□□□□ 0.66
CLUHP3-202ENST00000411844 EEA1Q15075 1411 aa19.17■□□□□ 0.66
CLUHP3-202ENST00000411844 FANCD2Q9BXW9 1451 aa19.16■□□□□ 0.66
CLUHP3-202ENST00000411844 PDS5BQ9NTI5 1447 aa19.13■□□□□ 0.65
CLUHP3-202ENST00000411844 CUX1P39880 1505 aa19.12■□□□□ 0.65
CLUHP3-202ENST00000411844 NESP48681 1621 aa19.11■□□□□ 0.65
CLUHP3-202ENST00000411844 CEP164Q9UPV0 1460 aa19.06■□□□□ 0.64
CLUHP3-202ENST00000411844 DNMBPQ6XZF7 1577 aa19.02■□□□□ 0.63
CLUHP3-202ENST00000411844 SOGA1O94964 1423 aa19■□□□□ 0.63
CLUHP3-202ENST00000411844 FAM9AQ8IZU1 332 aaPredicted RBP18.96■□□□□ 0.63
CLUHP3-202ENST00000411844 TOPBP1Q92547 1522 aa18.95■□□□□ 0.62
CLUHP3-202ENST00000411844 CSRNP3Q8WYN3 585 aa18.93■□□□□ 0.62
CLUHP3-202ENST00000411844 FGD5Q6ZNL6 1462 aa18.92■□□□□ 0.62
CLUHP3-202ENST00000411844 LOC105371045A0A1W2PR82 267 aa18.91■□□□□ 0.62
CLUHP3-202ENST00000411844 KIF21AQ7Z4S6 1674 aa18.91■□□□□ 0.62
CLUHP3-202ENST00000411844 URB2Q14146 1524 aaKnown RBP18.9■□□□□ 0.62
CLUHP3-202ENST00000411844 RUSC2Q8N2Y8 1516 aa18.9■□□□□ 0.62
CLUHP3-202ENST00000411844 KIF27Q86VH2 1401 aa18.89■□□□□ 0.61
CLUHP3-202ENST00000411844 MRC2Q9UBG0 1479 aa18.86■□□□□ 0.61
CLUHP3-202ENST00000411844 POLA1P09884 1462 aaPredicted RBP18.84■□□□□ 0.61
CLUHP3-202ENST00000411844 KIF21BO75037 1637 aa18.84■□□□□ 0.61
CLUHP3-202ENST00000411844 ABCA10Q8WWZ4 1543 aa18.82■□□□□ 0.6
CLUHP3-202ENST00000411844 GOLGA3Q08378 1498 aa18.8■□□□□ 0.6
CLUHP3-202ENST00000411844 CUX2O14529 1486 aa18.78■□□□□ 0.6
CLUHP3-202ENST00000411844 WDR62O43379 1518 aa18.77■□□□□ 0.6
CLUHP3-202ENST00000411844 ERICH3Q5RHP9 1530 aa18.75■□□□□ 0.59
CLUHP3-202ENST00000411844 TNIKQ9UKE5 1360 aa18.75■□□□□ 0.59
CLUHP3-202ENST00000411844 ERCC6Q03468 1493 aa18.75■□□□□ 0.59
CLUHP3-202ENST00000411844 PRXQ9BXM0 1461 aa18.75■□□□□ 0.59
CLUHP3-202ENST00000411844 WDR97A6NE52 1622 aa18.73■□□□□ 0.59
CLUHP3-202ENST00000411844 RAD54L2Q9Y4B4 1467 aa18.71■□□□□ 0.59
CLUHP3-202ENST00000411844 IGF1RP08069 1367 aa18.68■□□□□ 0.58
CLUHP3-202ENST00000411844 THOC2Q8NI27 1593 aaKnown RBP18.68■□□□□ 0.58
CLUHP3-202ENST00000411844 TARBP1Q13395 1621 aaKnown RBP18.67■□□□□ 0.58
CLUHP3-202ENST00000411844 IFT140Q96RY7 1462 aa18.65■□□□□ 0.58
CLUHP3-202ENST00000411844 RAPGEF2Q9Y4G8 1499 aa18.65■□□□□ 0.58
CLUHP3-202ENST00000411844 ABCA5Q8WWZ7 1642 aa18.64■□□□□ 0.57
CLUHP3-202ENST00000411844 UBTFP17480 764 aaKnown RBP18.62■□□□□ 0.57
CLUHP3-202ENST00000411844 CUL7Q14999 1698 aa18.6■□□□□ 0.57
CLUHP3-202ENST00000411844 GAPVD1Q14C86 1478 aa18.59■□□□□ 0.57
CLUHP3-202ENST00000411844 CARMIL1Q5VZK9 1371 aa18.59■□□□□ 0.57
CLUHP3-202ENST00000411844 EHMT2Q96KQ7 1210 aa18.59■□□□□ 0.57
CLUHP3-202ENST00000411844 CEP162Q5TB80 1403 aa18.58■□□□□ 0.57
CLUHP3-202ENST00000411844 TDRD9Q8NDG6 1382 aaKnown RBP18.55■□□□□ 0.56
CLUHP3-202ENST00000411844 GRIN2BQ13224 1484 aa18.49■□□□□ 0.55
CLUHP3-202ENST00000411844 CLIP1P30622 1438 aa18.47■□□□□ 0.55
CLUHP3-202ENST00000411844 PBRM1Q86U86 1689 aa18.45■□□□□ 0.54
CLUHP3-202ENST00000411844 FHAD1B1AJZ9 1412 aa18.43■□□□□ 0.54
CLUHP3-202ENST00000411844 AQRO60306 1485 aaKnown RBP eCLIP18.43■□□□□ 0.542e-7■■■■□ 19.4
CLUHP3-202ENST00000411844 ZNF608Q9ULD9 1512 aaPredicted RBP18.42■□□□□ 0.54
CLUHP3-202ENST00000411844 EIF4G3O43432 1585 aaKnown RBP18.41■□□□□ 0.54
CLUHP3-202ENST00000411844 ADAMTS12P58397 1594 aa18.4■□□□□ 0.54
CLUHP3-202ENST00000411844 MAGI1Q96QZ7 1491 aaPredicted RBP18.36■□□□□ 0.53
CLUHP3-202ENST00000411844 VPS8Q8N3P4 1428 aa18.33■□□□□ 0.53
CLUHP3-202ENST00000411844 CTTNBP2Q8WZ74 1663 aa18.32■□□□□ 0.52
CLUHP3-202ENST00000411844 SNAPC4Q5SXM2 1469 aa18.31■□□□□ 0.52
CLUHP3-202ENST00000411844 EFCAB5A4FU69 1503 aa18.29■□□□□ 0.52
CLUHP3-202ENST00000411844 ARHGAP35Q9NRY4 1499 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms