RNA–Protein interactions for RNA: ENST00000411642.6

TTC39A-207, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best)

Gene TTC39A, Length 931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-207ENST00000411642 NISCHQ9Y2I1 1504 aa24.27■■□□□ 1.48
TTC39A-207ENST00000411642 CCDC180Q9P1Z9 1646 aa21.58■■□□□ 1.05
TTC39A-207ENST00000411642 ABCC9O60706 1549 aa20.94■□□□□ 0.94
TTC39A-207ENST00000411642 ZCCHC6Q5VYS8 1495 aaKnown RBP20.26■□□□□ 0.83
TTC39A-207ENST00000411642 RB1CC1Q8TDY2 1594 aa20.22■□□□□ 0.83
TTC39A-207ENST00000411642 NACADO15069 1562 aa20.21■□□□□ 0.83
TTC39A-207ENST00000411642 DCAF8L2P0C7V8 631 aa20.19■□□□□ 0.82
TTC39A-207ENST00000411642 MYO15BQ96JP2 1530 aa20.11■□□□□ 0.81
TTC39A-207ENST00000411642 DCAF1Q9Y4B6 1507 aa20.08■□□□□ 0.81
TTC39A-207ENST00000411642 UNC13AQ9UPW8 1703 aa19.87■□□□□ 0.77
TTC39A-207ENST00000411642 SCRIBQ14160 1630 aa19.7■□□□□ 0.74
TTC39A-207ENST00000411642 BICRAQ9NZM4 1560 aa19.6■□□□□ 0.73
TTC39A-207ENST00000411642 PABPN1Q86U42 306 aaKnown RBP eCLIP19.54■□□□□ 0.72
TTC39A-207ENST00000411642 SHROOM4Q9ULL8 1493 aa19.38■□□□□ 0.69
TTC39A-207ENST00000411642 EIF4G1Q04637 1599 aaKnown RBP19.07■□□□□ 0.64
TTC39A-207ENST00000411642 DNAJC5BQ9UF47 199 aa19.03■□□□□ 0.64
TTC39A-207ENST00000411642 CC2D2AQ9P2K1 1620 aa18.97■□□□□ 0.63
TTC39A-207ENST00000411642 CECR2Q9BXF3 1484 aa18.89■□□□□ 0.61
TTC39A-207ENST00000411642 SMARCA4P51532 1647 aa18.85■□□□□ 0.61
TTC39A-207ENST00000411642 BAZ1AQ9NRL2 1556 aaPredicted RBP18.82■□□□□ 0.6
TTC39A-207ENST00000411642 MROH2BQ7Z745 1585 aa18.72■□□□□ 0.59
TTC39A-207ENST00000411642 SMARCA2P51531 1590 aa18.66■□□□□ 0.58
TTC39A-207ENST00000411642 ATAD2BQ9ULI0 1458 aa18.65■□□□□ 0.58
TTC39A-207ENST00000411642 PEG3Q9GZU2 1588 aa18.64■□□□□ 0.57
TTC39A-207ENST00000411642 NCAPD3P42695 1498 aa18.6■□□□□ 0.57
TTC39A-207ENST00000411642 HMGXB3Q12766 1538 aa18.58■□□□□ 0.56
TTC39A-207ENST00000411642 WIZO95785 1651 aa18.57■□□□□ 0.56
TTC39A-207ENST00000411642 BAZ1BQ9UIG0 1483 aaKnown RBP18.53■□□□□ 0.56
TTC39A-207ENST00000411642 RSF1Q96T23 1441 aaPredicted RBP18.52■□□□□ 0.56
TTC39A-207ENST00000411642 TOP2AP11388 1531 aaKnown RBP18.35■□□□□ 0.53
TTC39A-207ENST00000411642 NESP48681 1621 aa18.16■□□□□ 0.5
TTC39A-207ENST00000411642 SUPT5HO00267 1087 aaKnown RBP18.15■□□□□ 0.5
TTC39A-207ENST00000411642 LAMC3Q9Y6N6 1575 aa18.15■□□□□ 0.5
TTC39A-207ENST00000411642 CCDC88BA6NC98 1476 aa18.1■□□□□ 0.49
TTC39A-207ENST00000411642 CADPSQ9ULU8 1353 aa18.07■□□□□ 0.48
TTC39A-207ENST00000411642 ERCC6Q03468 1493 aa18.04■□□□□ 0.48
TTC39A-207ENST00000411642 PRDM2Q13029 1718 aa18.03■□□□□ 0.48
TTC39A-207ENST00000411642 KIF21AQ7Z4S6 1674 aa18.03■□□□□ 0.48
TTC39A-207ENST00000411642 CFTRP13569 1480 aa18.01■□□□□ 0.47
TTC39A-207ENST00000411642 PDS5BQ9NTI5 1447 aa17.98■□□□□ 0.47
TTC39A-207ENST00000411642 THOC2Q8NI27 1593 aaKnown RBP17.9■□□□□ 0.46
TTC39A-207ENST00000411642 FANCD2Q9BXW9 1451 aa17.89■□□□□ 0.45
TTC39A-207ENST00000411642 CEP164Q9UPV0 1460 aa17.87■□□□□ 0.45
TTC39A-207ENST00000411642 MRC2Q9UBG0 1479 aa17.81■□□□□ 0.44
TTC39A-207ENST00000411642 CUX2O14529 1486 aa17.78■□□□□ 0.44
TTC39A-207ENST00000411642 WDR62O43379 1518 aa17.76■□□□□ 0.43
TTC39A-207ENST00000411642 URB2Q14146 1524 aaKnown RBP17.72■□□□□ 0.43
TTC39A-207ENST00000411642 DNMBPQ6XZF7 1577 aa17.65■□□□□ 0.42
TTC39A-207ENST00000411642 TOPBP1Q92547 1522 aa17.63■□□□□ 0.41
TTC39A-207ENST00000411642 ABCC8Q09428 1581 aa17.62■□□□□ 0.41
TTC39A-207ENST00000411642 CUX1P39880 1505 aa17.55■□□□□ 0.4
TTC39A-207ENST00000411642 POLA1P09884 1462 aaPredicted RBP17.5■□□□□ 0.39
TTC39A-207ENST00000411642 BIVM-ERCC5R4GMW8 1640 aa17.48■□□□□ 0.39
TTC39A-207ENST00000411642 FGD5Q6ZNL6 1462 aa17.48■□□□□ 0.39
TTC39A-207ENST00000411642 WRNQ14191 1432 aaPredicted RBP eCLIP17.47■□□□□ 0.39
TTC39A-207ENST00000411642 IFT140Q96RY7 1462 aa17.47■□□□□ 0.39
TTC39A-207ENST00000411642 SYNJ1O43426 1573 aa17.47■□□□□ 0.39
TTC39A-207ENST00000411642 TOP2BQ02880 1626 aa17.46■□□□□ 0.39
TTC39A-207ENST00000411642 TARBP1Q13395 1621 aaKnown RBP17.46■□□□□ 0.39
TTC39A-207ENST00000411642 RAD54L2Q9Y4B4 1467 aa17.4■□□□□ 0.38
TTC39A-207ENST00000411642 SOGA1O94964 1423 aa17.39■□□□□ 0.38
TTC39A-207ENST00000411642 ZNF608Q9ULD9 1512 aaPredicted RBP17.39■□□□□ 0.37
TTC39A-207ENST00000411642 WDR97A6NE52 1622 aa17.39■□□□□ 0.37
TTC39A-207ENST00000411642 EIF4G3O43432 1585 aaKnown RBP17.38■□□□□ 0.37
TTC39A-207ENST00000411642 ABCA10Q8WWZ4 1543 aa17.3■□□□□ 0.36
TTC39A-207ENST00000411642 AQRO60306 1485 aaKnown RBP eCLIP17.3■□□□□ 0.36
TTC39A-207ENST00000411642 TDRD9Q8NDG6 1382 aaKnown RBP17.28■□□□□ 0.36
TTC39A-207ENST00000411642 PBRM1Q86U86 1689 aa17.26■□□□□ 0.35
TTC39A-207ENST00000411642 ABCA5Q8WWZ7 1642 aa17.26■□□□□ 0.35
TTC39A-207ENST00000411642 GAPVD1Q14C86 1478 aa17.21■□□□□ 0.35
TTC39A-207ENST00000411642 GRIN2BQ13224 1484 aa17.19■□□□□ 0.34
TTC39A-207ENST00000411642 CHD1O14646 1710 aa17.18■□□□□ 0.34
TTC39A-207ENST00000411642 SNAPC4Q5SXM2 1469 aa17.17■□□□□ 0.34
TTC39A-207ENST00000411642 MAGI1Q96QZ7 1491 aaPredicted RBP17.14■□□□□ 0.33
TTC39A-207ENST00000411642 TRIM41Q8WV44 630 aa17.12■□□□□ 0.33
TTC39A-207ENST00000411642 ERICH3Q5RHP9 1530 aa17.11■□□□□ 0.33
TTC39A-207ENST00000411642 KIF27Q86VH2 1401 aa17.09■□□□□ 0.33
TTC39A-207ENST00000411642 ADAMTS12P58397 1594 aa17.09■□□□□ 0.33
TTC39A-207ENST00000411642 SYNJ2O15056 1496 aa17.06■□□□□ 0.32
TTC39A-207ENST00000411642 FBLN2P98095 1184 aa17.05■□□□□ 0.32
TTC39A-207ENST00000411642 DNAJC5Q9H3Z4 198 aa17.03■□□□□ 0.32
TTC39A-207ENST00000411642 CUL7Q14999 1698 aa17.02■□□□□ 0.32
TTC39A-207ENST00000411642 OSCARQ8IYS5 282 aa17.02■□□□□ 0.32
TTC39A-207ENST00000411642 CHMP7Q8WUX9 453 aaPredicted RBP17.01■□□□□ 0.31
TTC39A-207ENST00000411642 FHAD1B1AJZ9 1412 aa17.01■□□□□ 0.31
TTC39A-207ENST00000411642 CHIC1Q5VXU3 224 aa17■□□□□ 0.31
TTC39A-207ENST00000411642 RUSC2Q8N2Y8 1516 aa16.99■□□□□ 0.31
TTC39A-207ENST00000411642 GRIN2AQ12879 1464 aa16.99■□□□□ 0.31
TTC39A-207ENST00000411642 IGF1RP08069 1367 aa16.98■□□□□ 0.31
TTC39A-207ENST00000411642 CLASP1Q7Z460 1538 aa16.92■□□□□ 0.3
TTC39A-207ENST00000411642 CEP170Q5SW79 1584 aa16.92■□□□□ 0.3
TTC39A-207ENST00000411642 CARMIL1Q5VZK9 1371 aa16.89■□□□□ 0.3
TTC39A-207ENST00000411642 NUP160Q12769 1436 aa16.88■□□□□ 0.29
TTC39A-207ENST00000411642 EEA1Q15075 1411 aa16.86■□□□□ 0.29
TTC39A-207ENST00000411642 RIMBP3CA6NJZ7 1639 aa16.83■□□□□ 0.28
TTC39A-207ENST00000411642 RIMBP3BA6NNM3 1639 aa16.83■□□□□ 0.28
TTC39A-207ENST00000411642 RIMBP3Q9UFD9 1639 aa16.83■□□□□ 0.28
TTC39A-207ENST00000411642 RAPGEF2Q9Y4G8 1499 aa16.83■□□□□ 0.28
TTC39A-207ENST00000411642 ARHGEF11O15085 1522 aa16.81■□□□□ 0.28
TTC39A-207ENST00000411642 PRXQ9BXM0 1461 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms