RNA–Protein interactions for RNA: ENST00000411409.1

RN7SKP3-201, Transcript of RNA, 7SK small nuclear pseudogene 3, humanhuman

BASIC

Gene RN7SKP3, Length 358 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP3-201ENST00000411409 NISCHQ9Y2I1 1504 aa22.48■■□□□ 1.19
RN7SKP3-201ENST00000411409 AEBP2Q6ZN18 517 aaPredicted RBP21.3■■□□□ 1
RN7SKP3-201ENST00000411409 CHIC1Q5VXU3 224 aa21.19■□□□□ 0.98
RN7SKP3-201ENST00000411409 CCDC180Q9P1Z9 1646 aa19.93■□□□□ 0.78
RN7SKP3-201ENST00000411409 ABCC9O60706 1549 aa19.35■□□□□ 0.69
RN7SKP3-201ENST00000411409 MYO15BQ96JP2 1530 aa18.78■□□□□ 0.6
RN7SKP3-201ENST00000411409 ZCCHC6Q5VYS8 1495 aaKnown RBP18.77■□□□□ 0.6
RN7SKP3-201ENST00000411409 DCAF1Q9Y4B6 1507 aa18.74■□□□□ 0.59
RN7SKP3-201ENST00000411409 NACADO15069 1562 aa18.71■□□□□ 0.59
RN7SKP3-201ENST00000411409 PHF23Q9BUL5 403 aaPredicted RBP18.69■□□□□ 0.58
RN7SKP3-201ENST00000411409 RB1CC1Q8TDY2 1594 aa18.64■□□□□ 0.57
RN7SKP3-201ENST00000411409 DCAF8L2P0C7V8 631 aa18.56■□□□□ 0.56
RN7SKP3-201ENST00000411409 DNAJC5BQ9UF47 199 aa18.22■□□□□ 0.51
RN7SKP3-201ENST00000411409 UNC13AQ9UPW8 1703 aa18.05■□□□□ 0.48
RN7SKP3-201ENST00000411409 SHROOM4Q9ULL8 1493 aa18.05■□□□□ 0.48
RN7SKP3-201ENST00000411409 PABPN1Q86U42 306 aaKnown RBP eCLIP18.04■□□□□ 0.48
RN7SKP3-201ENST00000411409 SCRIBQ14160 1630 aa18.03■□□□□ 0.48
RN7SKP3-201ENST00000411409 SENP3Q9H4L4 574 aaPredicted RBP17.98■□□□□ 0.47
RN7SKP3-201ENST00000411409 BICRAQ9NZM4 1560 aa17.96■□□□□ 0.46
RN7SKP3-201ENST00000411409 EIF4G1Q04637 1599 aaKnown RBP17.5■□□□□ 0.39
RN7SKP3-201ENST00000411409 CECR2Q9BXF3 1484 aa17.45■□□□□ 0.38
RN7SKP3-201ENST00000411409 BAZ1AQ9NRL2 1556 aaPredicted RBP17.45■□□□□ 0.38
RN7SKP3-201ENST00000411409 CC2D2AQ9P2K1 1620 aa17.44■□□□□ 0.38
RN7SKP3-201ENST00000411409 PLPPR3Q6T4P5 718 aa17.37■□□□□ 0.37
RN7SKP3-201ENST00000411409 SMARCA4P51532 1647 aa17.36■□□□□ 0.37
RN7SKP3-201ENST00000411409 SMARCA2P51531 1590 aa17.28■□□□□ 0.36
RN7SKP3-201ENST00000411409 PEG3Q9GZU2 1588 aa17.28■□□□□ 0.36
RN7SKP3-201ENST00000411409 NCAPD3P42695 1498 aa17.25■□□□□ 0.35
RN7SKP3-201ENST00000411409 MROH2BQ7Z745 1585 aa17.25■□□□□ 0.35
RN7SKP3-201ENST00000411409 ATAD2BQ9ULI0 1458 aa17.24■□□□□ 0.35
RN7SKP3-201ENST00000411409 RSF1Q96T23 1441 aaPredicted RBP17.2■□□□□ 0.34
RN7SKP3-201ENST00000411409 HMGXB3Q12766 1538 aa17.18■□□□□ 0.34
RN7SKP3-201ENST00000411409 BAZ1BQ9UIG0 1483 aaKnown RBP17.1■□□□□ 0.33
RN7SKP3-201ENST00000411409 WIZO95785 1651 aa17.04■□□□□ 0.32
RN7SKP3-201ENST00000411409 TOP2AP11388 1531 aaKnown RBP16.98■□□□□ 0.31
RN7SKP3-201ENST00000411409 DNAJC5Q9H3Z4 198 aa16.86■□□□□ 0.29
RN7SKP3-201ENST00000411409 SUPT5HO00267 1087 aaKnown RBP16.82■□□□□ 0.28
RN7SKP3-201ENST00000411409 ERCC6Q03468 1493 aa16.78■□□□□ 0.28
RN7SKP3-201ENST00000411409 LAMC3Q9Y6N6 1575 aa16.75■□□□□ 0.27
RN7SKP3-201ENST00000411409 CADPSQ9ULU8 1353 aa16.75■□□□□ 0.27
RN7SKP3-201ENST00000411409 CCDC88BA6NC98 1476 aa16.74■□□□□ 0.27
RN7SKP3-201ENST00000411409 CUX2O14529 1486 aa16.73■□□□□ 0.27
RN7SKP3-201ENST00000411409 CFTRP13569 1480 aa16.69■□□□□ 0.26
RN7SKP3-201ENST00000411409 PDS5BQ9NTI5 1447 aa16.65■□□□□ 0.26
RN7SKP3-201ENST00000411409 FOXD1Q16676 465 aa16.64■□□□□ 0.25
RN7SKP3-201ENST00000411409 NESP48681 1621 aa16.57■□□□□ 0.24
RN7SKP3-201ENST00000411409 PRDM2Q13029 1718 aa16.53■□□□□ 0.24
RN7SKP3-201ENST00000411409 FANCD2Q9BXW9 1451 aa16.49■□□□□ 0.23
RN7SKP3-201ENST00000411409 CEP164Q9UPV0 1460 aa16.47■□□□□ 0.23
RN7SKP3-201ENST00000411409 ABCC8Q09428 1581 aa16.43■□□□□ 0.22
RN7SKP3-201ENST00000411409 MRC2Q9UBG0 1479 aa16.4■□□□□ 0.22
RN7SKP3-201ENST00000411409 KIF21AQ7Z4S6 1674 aa16.4■□□□□ 0.22
RN7SKP3-201ENST00000411409 THOC2Q8NI27 1593 aaKnown RBP16.38■□□□□ 0.21
RN7SKP3-201ENST00000411409 WDR62O43379 1518 aa16.35■□□□□ 0.21
RN7SKP3-201ENST00000411409 PPP6R1Q9UPN7 881 aa16.34■□□□□ 0.21
RN7SKP3-201ENST00000411409 ADRA2BP18089 450 aa16.32■□□□□ 0.2
RN7SKP3-201ENST00000411409 DNMBPQ6XZF7 1577 aa16.28■□□□□ 0.2
RN7SKP3-201ENST00000411409 URB2Q14146 1524 aaKnown RBP16.27■□□□□ 0.2
RN7SKP3-201ENST00000411409 TOPBP1Q92547 1522 aa16.24■□□□□ 0.19
RN7SKP3-201ENST00000411409 WRNQ14191 1432 aaPredicted RBP eCLIP16.22■□□□□ 0.19
RN7SKP3-201ENST00000411409 CUX1P39880 1505 aa16.18■□□□□ 0.18
RN7SKP3-201ENST00000411409 IFT140Q96RY7 1462 aa16.16■□□□□ 0.18
RN7SKP3-201ENST00000411409 TOP2BQ02880 1626 aa16.16■□□□□ 0.18
RN7SKP3-201ENST00000411409 BIVM-ERCC5R4GMW8 1640 aa16.15■□□□□ 0.18
RN7SKP3-201ENST00000411409 TRIM41Q8WV44 630 aa16.14■□□□□ 0.17
RN7SKP3-201ENST00000411409 POLA1P09884 1462 aaPredicted RBP16.12■□□□□ 0.17
RN7SKP3-201ENST00000411409 WDR97A6NE52 1622 aa16.1■□□□□ 0.17
RN7SKP3-201ENST00000411409 FGD5Q6ZNL6 1462 aa16.1■□□□□ 0.17
RN7SKP3-201ENST00000411409 SOGA1O94964 1423 aa16.09■□□□□ 0.17
RN7SKP3-201ENST00000411409 SYNJ1O43426 1573 aa16.08■□□□□ 0.16
RN7SKP3-201ENST00000411409 TARBP1Q13395 1621 aaKnown RBP16.05■□□□□ 0.16
RN7SKP3-201ENST00000411409 ABCA10Q8WWZ4 1543 aa16.04■□□□□ 0.16
RN7SKP3-201ENST00000411409 OSCARQ8IYS5 282 aa16.01■□□□□ 0.15
RN7SKP3-201ENST00000411409 RAD54L2Q9Y4B4 1467 aa15.98■□□□□ 0.15
RN7SKP3-201ENST00000411409 ZNF608Q9ULD9 1512 aaPredicted RBP15.93■□□□□ 0.14
RN7SKP3-201ENST00000411409 KIF27Q86VH2 1401 aa15.92■□□□□ 0.14
RN7SKP3-201ENST00000411409 GRIN2BQ13224 1484 aa15.91■□□□□ 0.14
RN7SKP3-201ENST00000411409 GAPVD1Q14C86 1478 aa15.91■□□□□ 0.14
RN7SKP3-201ENST00000411409 TDRD9Q8NDG6 1382 aaKnown RBP15.9■□□□□ 0.14
RN7SKP3-201ENST00000411409 EIF4G3O43432 1585 aaKnown RBP15.9■□□□□ 0.14
RN7SKP3-201ENST00000411409 ABCA5Q8WWZ7 1642 aa15.9■□□□□ 0.14
RN7SKP3-201ENST00000411409 AQRO60306 1485 aaKnown RBP eCLIP15.89■□□□□ 0.13
RN7SKP3-201ENST00000411409 ERICH3Q5RHP9 1530 aa15.87■□□□□ 0.13
RN7SKP3-201ENST00000411409 MAGI1Q96QZ7 1491 aaPredicted RBP15.86■□□□□ 0.13
RN7SKP3-201ENST00000411409 EEA1Q15075 1411 aa15.85■□□□□ 0.13
RN7SKP3-201ENST00000411409 PBRM1Q86U86 1689 aa15.79■□□□□ 0.12
RN7SKP3-201ENST00000411409 IGF1RP08069 1367 aa15.78■□□□□ 0.12
RN7SKP3-201ENST00000411409 FHAD1B1AJZ9 1412 aa15.77■□□□□ 0.12
RN7SKP3-201ENST00000411409 PIAS4Q8N2W9 510 aaPredicted RBP15.77■□□□□ 0.12
RN7SKP3-201ENST00000411409 SYNJ2O15056 1496 aa15.77■□□□□ 0.11
RN7SKP3-201ENST00000411409 SNAPC4Q5SXM2 1469 aa15.77■□□□□ 0.11
RN7SKP3-201ENST00000411409 CUL7Q14999 1698 aa15.75■□□□□ 0.11
RN7SKP3-201ENST00000411409 CHMP7Q8WUX9 453 aaPredicted RBP15.73■□□□□ 0.11
RN7SKP3-201ENST00000411409 ADAMTS12P58397 1594 aa15.71■□□□□ 0.11
RN7SKP3-201ENST00000411409 RIMBP3CA6NJZ7 1639 aa15.71■□□□□ 0.11
RN7SKP3-201ENST00000411409 RIMBP3BA6NNM3 1639 aa15.71■□□□□ 0.11
RN7SKP3-201ENST00000411409 RIMBP3Q9UFD9 1639 aa15.71■□□□□ 0.11
RN7SKP3-201ENST00000411409 CARMIL1Q5VZK9 1371 aa15.7■□□□□ 0.1
RN7SKP3-201ENST00000411409 FBLN2P98095 1184 aa15.69■□□□□ 0.1
RN7SKP3-201ENST00000411409 CSRNP3Q8WYN3 585 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms