RNA–Protein interactions for RNA: ENST00000411018.1

RN7SKP262-201, Transcript of RNA, 7SK small nuclear pseudogene 262, humanhuman

BASIC

Gene RN7SKP262, Length 283 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP262-201ENST00000411018 NISCHQ9Y2I1 1504 aa28.28■■■□□ 2.12
RN7SKP262-201ENST00000411018 CCDC180Q9P1Z9 1646 aa24.74■■□□□ 1.55
RN7SKP262-201ENST00000411018 AEBP2Q6ZN18 517 aaPredicted RBP24.51■■□□□ 1.51
RN7SKP262-201ENST00000411018 ZCCHC6Q5VYS8 1495 aaKnown RBP23.71■■□□□ 1.39
RN7SKP262-201ENST00000411018 ABCC9O60706 1549 aa23.5■■□□□ 1.35
RN7SKP262-201ENST00000411018 DCAF1Q9Y4B6 1507 aa23.43■■□□□ 1.34
RN7SKP262-201ENST00000411018 MYO15BQ96JP2 1530 aa23.23■■□□□ 1.31
RN7SKP262-201ENST00000411018 DCAF8L2P0C7V8 631 aa23.18■■□□□ 1.3
RN7SKP262-201ENST00000411018 NACADO15069 1562 aa23.09■■□□□ 1.29
RN7SKP262-201ENST00000411018 RB1CC1Q8TDY2 1594 aa22.89■■□□□ 1.26
RN7SKP262-201ENST00000411018 CHIC1Q5VXU3 224 aa22.86■■□□□ 1.25
RN7SKP262-201ENST00000411018 SHROOM4Q9ULL8 1493 aa22.74■■□□□ 1.23
RN7SKP262-201ENST00000411018 SCRIBQ14160 1630 aa22.64■■□□□ 1.21
RN7SKP262-201ENST00000411018 UNC13AQ9UPW8 1703 aa22.49■■□□□ 1.19
RN7SKP262-201ENST00000411018 BICRAQ9NZM4 1560 aa22.32■■□□□ 1.16
RN7SKP262-201ENST00000411018 PABPN1Q86U42 306 aaKnown RBP eCLIP22.11■■□□□ 1.13
RN7SKP262-201ENST00000411018 CECR2Q9BXF3 1484 aa21.98■■□□□ 1.11
RN7SKP262-201ENST00000411018 RSF1Q96T23 1441 aaPredicted RBP21.85■■□□□ 1.09
RN7SKP262-201ENST00000411018 MROH2BQ7Z745 1585 aa21.83■■□□□ 1.09
RN7SKP262-201ENST00000411018 BAZ1AQ9NRL2 1556 aaPredicted RBP21.79■■□□□ 1.08
RN7SKP262-201ENST00000411018 SUPT5HO00267 1087 aaKnown RBP21.76■■□□□ 1.07
RN7SKP262-201ENST00000411018 SMARCA4P51532 1647 aa21.76■■□□□ 1.07
RN7SKP262-201ENST00000411018 WIZO95785 1651 aa21.61■■□□□ 1.05
RN7SKP262-201ENST00000411018 EIF4G1Q04637 1599 aaKnown RBP21.58■■□□□ 1.05
RN7SKP262-201ENST00000411018 PEG3Q9GZU2 1588 aa21.57■■□□□ 1.04
RN7SKP262-201ENST00000411018 ATAD2BQ9ULI0 1458 aa21.47■■□□□ 1.03
RN7SKP262-201ENST00000411018 SMARCA2P51531 1590 aa21.4■■□□□ 1.02
RN7SKP262-201ENST00000411018 TOP2AP11388 1531 aaKnown RBP21.39■■□□□ 1.01
RN7SKP262-201ENST00000411018 NCAPD3P42695 1498 aa21.34■■□□□ 1.01
RN7SKP262-201ENST00000411018 CC2D2AQ9P2K1 1620 aa21.31■■□□□ 1
RN7SKP262-201ENST00000411018 HMGXB3Q12766 1538 aa21.27■■□□□ 1
RN7SKP262-201ENST00000411018 BAZ1BQ9UIG0 1483 aaKnown RBP21.26■□□□□ 0.99
RN7SKP262-201ENST00000411018 CCDC88BA6NC98 1476 aa21.18■□□□□ 0.98
RN7SKP262-201ENST00000411018 DNAJC5BQ9UF47 199 aa21.03■□□□□ 0.96
RN7SKP262-201ENST00000411018 SENP3Q9H4L4 574 aaPredicted RBP20.94■□□□□ 0.94
RN7SKP262-201ENST00000411018 CFTRP13569 1480 aa20.8■□□□□ 0.92
RN7SKP262-201ENST00000411018 CADPSQ9ULU8 1353 aa20.73■□□□□ 0.91
RN7SKP262-201ENST00000411018 PRDM2Q13029 1718 aa20.64■□□□□ 0.9
RN7SKP262-201ENST00000411018 NESP48681 1621 aa20.61■□□□□ 0.89
RN7SKP262-201ENST00000411018 ABCC8Q09428 1581 aa20.61■□□□□ 0.89
RN7SKP262-201ENST00000411018 PHF23Q9BUL5 403 aaPredicted RBP20.6■□□□□ 0.89
RN7SKP262-201ENST00000411018 LAMC3Q9Y6N6 1575 aa20.59■□□□□ 0.89
RN7SKP262-201ENST00000411018 WRNQ14191 1432 aaPredicted RBP eCLIP20.51■□□□□ 0.87
RN7SKP262-201ENST00000411018 TRIM41Q8WV44 630 aa20.5■□□□□ 0.87
RN7SKP262-201ENST00000411018 FANCD2Q9BXW9 1451 aa20.48■□□□□ 0.87
RN7SKP262-201ENST00000411018 SYNJ1O43426 1573 aa20.47■□□□□ 0.87
RN7SKP262-201ENST00000411018 CUX1P39880 1505 aa20.42■□□□□ 0.86
RN7SKP262-201ENST00000411018 TOP2BQ02880 1626 aa20.41■□□□□ 0.86
RN7SKP262-201ENST00000411018 BIVM-ERCC5R4GMW8 1640 aa20.41■□□□□ 0.86
RN7SKP262-201ENST00000411018 PDS5BQ9NTI5 1447 aa20.4■□□□□ 0.86
RN7SKP262-201ENST00000411018 KIF21AQ7Z4S6 1674 aa20.35■□□□□ 0.85
RN7SKP262-201ENST00000411018 CEP164Q9UPV0 1460 aa20.34■□□□□ 0.85
RN7SKP262-201ENST00000411018 URB2Q14146 1524 aaKnown RBP20.28■□□□□ 0.84
RN7SKP262-201ENST00000411018 DNMBPQ6XZF7 1577 aa20.27■□□□□ 0.84
RN7SKP262-201ENST00000411018 TOPBP1Q92547 1522 aa20.26■□□□□ 0.83
RN7SKP262-201ENST00000411018 SOGA1O94964 1423 aa20.21■□□□□ 0.83
RN7SKP262-201ENST00000411018 FGD5Q6ZNL6 1462 aa20.18■□□□□ 0.82
RN7SKP262-201ENST00000411018 RUSC2Q8N2Y8 1516 aa20.18■□□□□ 0.82
RN7SKP262-201ENST00000411018 MRC2Q9UBG0 1479 aa20.18■□□□□ 0.82
RN7SKP262-201ENST00000411018 POLA1P09884 1462 aaPredicted RBP20.14■□□□□ 0.81
RN7SKP262-201ENST00000411018 WDR62O43379 1518 aa20.12■□□□□ 0.81
RN7SKP262-201ENST00000411018 THOC2Q8NI27 1593 aaKnown RBP20.12■□□□□ 0.81
RN7SKP262-201ENST00000411018 ERCC6Q03468 1493 aa20.1■□□□□ 0.81
RN7SKP262-201ENST00000411018 EEA1Q15075 1411 aa20.1■□□□□ 0.81
RN7SKP262-201ENST00000411018 FAM9AQ8IZU1 332 aaPredicted RBP20.08■□□□□ 0.81
RN7SKP262-201ENST00000411018 RAD54L2Q9Y4B4 1467 aa20.06■□□□□ 0.8
RN7SKP262-201ENST00000411018 ABCA10Q8WWZ4 1543 aa20.04■□□□□ 0.8
RN7SKP262-201ENST00000411018 CUX2O14529 1486 aa20.04■□□□□ 0.8
RN7SKP262-201ENST00000411018 WDR97A6NE52 1622 aa20.02■□□□□ 0.8
RN7SKP262-201ENST00000411018 TARBP1Q13395 1621 aaKnown RBP20.02■□□□□ 0.8
RN7SKP262-201ENST00000411018 LOC105371045A0A1W2PR82 267 aa20.01■□□□□ 0.79
RN7SKP262-201ENST00000411018 CSRNP3Q8WYN3 585 aa20.01■□□□□ 0.79
RN7SKP262-201ENST00000411018 KIF27Q86VH2 1401 aa19.99■□□□□ 0.79
RN7SKP262-201ENST00000411018 IGF1RP08069 1367 aa19.92■□□□□ 0.78
RN7SKP262-201ENST00000411018 ABCA5Q8WWZ7 1642 aa19.91■□□□□ 0.78
RN7SKP262-201ENST00000411018 IFT140Q96RY7 1462 aa19.9■□□□□ 0.78
RN7SKP262-201ENST00000411018 PRXQ9BXM0 1461 aa19.89■□□□□ 0.77
RN7SKP262-201ENST00000411018 KIF21BO75037 1637 aa19.88■□□□□ 0.77
RN7SKP262-201ENST00000411018 TDRD9Q8NDG6 1382 aaKnown RBP19.86■□□□□ 0.77
RN7SKP262-201ENST00000411018 ZNF608Q9ULD9 1512 aaPredicted RBP19.82■□□□□ 0.76
RN7SKP262-201ENST00000411018 GAPVD1Q14C86 1478 aa19.82■□□□□ 0.76
RN7SKP262-201ENST00000411018 RAPGEF2Q9Y4G8 1499 aa19.8■□□□□ 0.76
RN7SKP262-201ENST00000411018 GOLGA3Q08378 1498 aa19.79■□□□□ 0.76
RN7SKP262-201ENST00000411018 ERICH3Q5RHP9 1530 aa19.79■□□□□ 0.76
RN7SKP262-201ENST00000411018 AQRO60306 1485 aaKnown RBP eCLIP19.79■□□□□ 0.76
RN7SKP262-201ENST00000411018 CARMIL1Q5VZK9 1371 aa19.75■□□□□ 0.75
RN7SKP262-201ENST00000411018 TNIKQ9UKE5 1360 aa19.74■□□□□ 0.75
RN7SKP262-201ENST00000411018 EHMT2Q96KQ7 1210 aa19.73■□□□□ 0.75
RN7SKP262-201ENST00000411018 PBRM1Q86U86 1689 aa19.72■□□□□ 0.75
RN7SKP262-201ENST00000411018 EIF4G3O43432 1585 aaKnown RBP19.72■□□□□ 0.75
RN7SKP262-201ENST00000411018 CUL7Q14999 1698 aa19.71■□□□□ 0.75
RN7SKP262-201ENST00000411018 GRIN2BQ13224 1484 aa19.7■□□□□ 0.74
RN7SKP262-201ENST00000411018 ADAMTS12P58397 1594 aa19.62■□□□□ 0.73
RN7SKP262-201ENST00000411018 UBTFP17480 764 aaKnown RBP19.62■□□□□ 0.73
RN7SKP262-201ENST00000411018 FHAD1B1AJZ9 1412 aa19.61■□□□□ 0.73
RN7SKP262-201ENST00000411018 FOXD1Q16676 465 aa19.6■□□□□ 0.73
RN7SKP262-201ENST00000411018 SNAPC4Q5SXM2 1469 aa19.58■□□□□ 0.72
RN7SKP262-201ENST00000411018 CEP162Q5TB80 1403 aa19.57■□□□□ 0.72
RN7SKP262-201ENST00000411018 MAGI1Q96QZ7 1491 aaPredicted RBP19.56■□□□□ 0.72
RN7SKP262-201ENST00000411018 SYNJ2O15056 1496 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms