RNA–Protein interactions for RNA: ENST00000410540.1

RN7SKP7-201, Transcript of RNA, 7SK small nuclear pseudogene 7, humanhuman

BASIC

Gene RN7SKP7, Length 285 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP7-201ENST00000410540 NISCHQ9Y2I1 1504 aa22.01■■□□□ 1.11
RN7SKP7-201ENST00000410540 CCDC180Q9P1Z9 1646 aa19.28■□□□□ 0.68
RN7SKP7-201ENST00000410540 ZCCHC6Q5VYS8 1495 aaKnown RBP18.47■□□□□ 0.55
RN7SKP7-201ENST00000410540 DCAF1Q9Y4B6 1507 aa18.28■□□□□ 0.52
RN7SKP7-201ENST00000410540 ABCC9O60706 1549 aa18.15■□□□□ 0.5
RN7SKP7-201ENST00000410540 MYO15BQ96JP2 1530 aa18.12■□□□□ 0.49
RN7SKP7-201ENST00000410540 DCAF8L2P0C7V8 631 aa18.07■□□□□ 0.48
RN7SKP7-201ENST00000410540 NACADO15069 1562 aa17.97■□□□□ 0.47
RN7SKP7-201ENST00000410540 RB1CC1Q8TDY2 1594 aa17.81■□□□□ 0.44
RN7SKP7-201ENST00000410540 SHROOM4Q9ULL8 1493 aa17.75■□□□□ 0.43
RN7SKP7-201ENST00000410540 SCRIBQ14160 1630 aa17.59■□□□□ 0.41
RN7SKP7-201ENST00000410540 UNC13AQ9UPW8 1703 aa17.38■□□□□ 0.37
RN7SKP7-201ENST00000410540 BICRAQ9NZM4 1560 aa17.23■□□□□ 0.35
RN7SKP7-201ENST00000410540 SUPT5HO00267 1087 aaKnown RBP17.08■□□□□ 0.32
RN7SKP7-201ENST00000410540 PABPN1Q86U42 306 aaKnown RBP eCLIP17.08■□□□□ 0.32
RN7SKP7-201ENST00000410540 CECR2Q9BXF3 1484 aa17.04■□□□□ 0.32
RN7SKP7-201ENST00000410540 RSF1Q96T23 1441 aaPredicted RBP17.03■□□□□ 0.32
RN7SKP7-201ENST00000410540 BAZ1AQ9NRL2 1556 aaPredicted RBP17.02■□□□□ 0.31
RN7SKP7-201ENST00000410540 MROH2BQ7Z745 1585 aa16.95■□□□□ 0.3
RN7SKP7-201ENST00000410540 SMARCA4P51532 1647 aa16.92■□□□□ 0.3
RN7SKP7-201ENST00000410540 WIZO95785 1651 aa16.8■□□□□ 0.28
RN7SKP7-201ENST00000410540 PEG3Q9GZU2 1588 aa16.78■□□□□ 0.28
RN7SKP7-201ENST00000410540 EIF4G1Q04637 1599 aaKnown RBP16.72■□□□□ 0.27
RN7SKP7-201ENST00000410540 SMARCA2P51531 1590 aa16.69■□□□□ 0.26
RN7SKP7-201ENST00000410540 TOP2AP11388 1531 aaKnown RBP16.69■□□□□ 0.26
RN7SKP7-201ENST00000410540 ATAD2BQ9ULI0 1458 aa16.67■□□□□ 0.26
RN7SKP7-201ENST00000410540 NCAPD3P42695 1498 aa16.57■□□□□ 0.24
RN7SKP7-201ENST00000410540 BAZ1BQ9UIG0 1483 aaKnown RBP16.56■□□□□ 0.24
RN7SKP7-201ENST00000410540 HMGXB3Q12766 1538 aa16.55■□□□□ 0.24
RN7SKP7-201ENST00000410540 CCDC88BA6NC98 1476 aa16.48■□□□□ 0.23
RN7SKP7-201ENST00000410540 CC2D2AQ9P2K1 1620 aa16.47■□□□□ 0.23
RN7SKP7-201ENST00000410540 CHIC1Q5VXU3 224 aa16.37■□□□□ 0.21
RN7SKP7-201ENST00000410540 CFTRP13569 1480 aa16.16■□□□□ 0.18
RN7SKP7-201ENST00000410540 TRIM41Q8WV44 630 aa16.14■□□□□ 0.17
RN7SKP7-201ENST00000410540 CADPSQ9ULU8 1353 aa16.12■□□□□ 0.17
RN7SKP7-201ENST00000410540 PRDM2Q13029 1718 aa16.09■□□□□ 0.17
RN7SKP7-201ENST00000410540 ABCC8Q09428 1581 aa16.05■□□□□ 0.16
RN7SKP7-201ENST00000410540 DNAJC5BQ9UF47 199 aa16.04■□□□□ 0.16
RN7SKP7-201ENST00000410540 WRNQ14191 1432 aaPredicted RBP eCLIP16.03■□□□□ 0.16
RN7SKP7-201ENST00000410540 LAMC3Q9Y6N6 1575 aa16.02■□□□□ 0.16
RN7SKP7-201ENST00000410540 SYNJ1O43426 1573 aa15.93■□□□□ 0.14
RN7SKP7-201ENST00000410540 TOP2BQ02880 1626 aa15.93■□□□□ 0.14
RN7SKP7-201ENST00000410540 FANCD2Q9BXW9 1451 aa15.92■□□□□ 0.14
RN7SKP7-201ENST00000410540 BIVM-ERCC5R4GMW8 1640 aa15.92■□□□□ 0.14
RN7SKP7-201ENST00000410540 NESP48681 1621 aa15.9■□□□□ 0.14
RN7SKP7-201ENST00000410540 PDS5BQ9NTI5 1447 aa15.89■□□□□ 0.13
RN7SKP7-201ENST00000410540 CUX1P39880 1505 aa15.87■□□□□ 0.13
RN7SKP7-201ENST00000410540 EEA1Q15075 1411 aa15.85■□□□□ 0.13
RN7SKP7-201ENST00000410540 CEP164Q9UPV0 1460 aa15.84■□□□□ 0.13
RN7SKP7-201ENST00000410540 DNMBPQ6XZF7 1577 aa15.79■□□□□ 0.12
RN7SKP7-201ENST00000410540 SOGA1O94964 1423 aa15.76■□□□□ 0.11
RN7SKP7-201ENST00000410540 KIF21AQ7Z4S6 1674 aa15.74■□□□□ 0.11
RN7SKP7-201ENST00000410540 TOPBP1Q92547 1522 aa15.73■□□□□ 0.11
RN7SKP7-201ENST00000410540 FAM9AQ8IZU1 332 aaPredicted RBP15.73■□□□□ 0.11
RN7SKP7-201ENST00000410540 URB2Q14146 1524 aaKnown RBP15.71■□□□□ 0.11
RN7SKP7-201ENST00000410540 FGD5Q6ZNL6 1462 aa15.71■□□□□ 0.1
RN7SKP7-201ENST00000410540 CSRNP3Q8WYN3 585 aa15.7■□□□□ 0.1
RN7SKP7-201ENST00000410540 RUSC2Q8N2Y8 1516 aa15.68■□□□□ 0.1
RN7SKP7-201ENST00000410540 LOC105371045A0A1W2PR82 267 aa15.68■□□□□ 0.1
RN7SKP7-201ENST00000410540 MRC2Q9UBG0 1479 aa15.67■□□□□ 0.1
RN7SKP7-201ENST00000410540 KIF27Q86VH2 1401 aa15.66■□□□□ 0.1
RN7SKP7-201ENST00000410540 POLA1P09884 1462 aaPredicted RBP15.65■□□□□ 0.1
RN7SKP7-201ENST00000410540 ERCC6Q03468 1493 aa15.61■□□□□ 0.09
RN7SKP7-201ENST00000410540 ABCA10Q8WWZ4 1543 aa15.61■□□□□ 0.09
RN7SKP7-201ENST00000410540 WDR62O43379 1518 aa15.6■□□□□ 0.09
RN7SKP7-201ENST00000410540 KIF21BO75037 1637 aa15.6■□□□□ 0.09
RN7SKP7-201ENST00000410540 CUX2O14529 1486 aa15.59■□□□□ 0.09
RN7SKP7-201ENST00000410540 GOLGA3Q08378 1498 aa15.56■□□□□ 0.08
RN7SKP7-201ENST00000410540 RAD54L2Q9Y4B4 1467 aa15.55■□□□□ 0.08
RN7SKP7-201ENST00000410540 WDR97A6NE52 1622 aa15.54■□□□□ 0.08
RN7SKP7-201ENST00000410540 THOC2Q8NI27 1593 aaKnown RBP15.53■□□□□ 0.08
RN7SKP7-201ENST00000410540 PRXQ9BXM0 1461 aa15.53■□□□□ 0.08
RN7SKP7-201ENST00000410540 TARBP1Q13395 1621 aaKnown RBP15.52■□□□□ 0.08
RN7SKP7-201ENST00000410540 ERICH3Q5RHP9 1530 aa15.52■□□□□ 0.07
RN7SKP7-201ENST00000410540 IGF1RP08069 1367 aa15.51■□□□□ 0.07
RN7SKP7-201ENST00000410540 TNIKQ9UKE5 1360 aa15.51■□□□□ 0.07
RN7SKP7-201ENST00000410540 IFT140Q96RY7 1462 aa15.48■□□□□ 0.07
RN7SKP7-201ENST00000410540 ABCA5Q8WWZ7 1642 aa15.47■□□□□ 0.07
RN7SKP7-201ENST00000410540 RAPGEF2Q9Y4G8 1499 aa15.46■□□□□ 0.06
RN7SKP7-201ENST00000410540 UBTFP17480 764 aaKnown RBP15.45■□□□□ 0.06
RN7SKP7-201ENST00000410540 EHMT2Q96KQ7 1210 aa15.44■□□□□ 0.06
RN7SKP7-201ENST00000410540 GAPVD1Q14C86 1478 aa15.44■□□□□ 0.06
RN7SKP7-201ENST00000410540 CARMIL1Q5VZK9 1371 aa15.43■□□□□ 0.06
RN7SKP7-201ENST00000410540 CUL7Q14999 1698 aa15.43■□□□□ 0.06
RN7SKP7-201ENST00000410540 TDRD9Q8NDG6 1382 aaKnown RBP15.42■□□□□ 0.06
RN7SKP7-201ENST00000410540 CEP162Q5TB80 1403 aa15.38■□□□□ 0.05
RN7SKP7-201ENST00000410540 PBRM1Q86U86 1689 aa15.35■□□□□ 0.05
RN7SKP7-201ENST00000410540 GRIN2BQ13224 1484 aa15.34■□□□□ 0.05
RN7SKP7-201ENST00000410540 AQRO60306 1485 aaKnown RBP eCLIP15.33■□□□□ 0.04
RN7SKP7-201ENST00000410540 ZNF608Q9ULD9 1512 aaPredicted RBP15.32■□□□□ 0.04
RN7SKP7-201ENST00000410540 FHAD1B1AJZ9 1412 aa15.3■□□□□ 0.04
RN7SKP7-201ENST00000410540 EIF4G3O43432 1585 aaKnown RBP15.29■□□□□ 0.04
RN7SKP7-201ENST00000410540 CLIP1P30622 1438 aa15.28■□□□□ 0.04
RN7SKP7-201ENST00000410540 ADAMTS12P58397 1594 aa15.27■□□□□ 0.03
RN7SKP7-201ENST00000410540 MAGI1Q96QZ7 1491 aaPredicted RBP15.24■□□□□ 0.03
RN7SKP7-201ENST00000410540 CTTNBP2Q8WZ74 1663 aa15.22■□□□□ 0.03
RN7SKP7-201ENST00000410540 SNAPC4Q5SXM2 1469 aa15.2■□□□□ 0.02
RN7SKP7-201ENST00000410540 SYNJ2O15056 1496 aa15.17■□□□□ 0.02
RN7SKP7-201ENST00000410540 VPS8Q8N3P4 1428 aa15.16■□□□□ 0.02
RN7SKP7-201ENST00000410540 GRIN2AQ12879 1464 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms