RNA–Protein interactions for RNA: ENST00000410465.1

RN7SKP229-201, Transcript of RNA, 7SK small nuclear pseudogene 229, humanhuman

BASIC

Gene RN7SKP229, Length 302 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP229-201ENST00000410465 NISCHQ9Y2I1 1504 aa15.17■□□□□ 0.02
RN7SKP229-201ENST00000410465 ABCC9O60706 1549 aa14.71□□□□□ -0.05
RN7SKP229-201ENST00000410465 DNAJC5BQ9UF47 199 aa14.54□□□□□ -0.08
RN7SKP229-201ENST00000410465 CCDC180Q9P1Z9 1646 aa13.88□□□□□ -0.19
RN7SKP229-201ENST00000410465 DNAJC5Q9H3Z4 198 aa13.83□□□□□ -0.2
RN7SKP229-201ENST00000410465 PABPN1Q86U42 306 aaKnown RBP eCLIP13.62□□□□□ -0.23
RN7SKP229-201ENST00000410465 RB1CC1Q8TDY2 1594 aa13.6□□□□□ -0.23
RN7SKP229-201ENST00000410465 UNC13AQ9UPW8 1703 aa13.33□□□□□ -0.27
RN7SKP229-201ENST00000410465 NACADO15069 1562 aa13.32□□□□□ -0.28
RN7SKP229-201ENST00000410465 CECR2Q9BXF3 1484 aa13.31□□□□□ -0.28
RN7SKP229-201ENST00000410465 BICRAQ9NZM4 1560 aa13.29□□□□□ -0.28
RN7SKP229-201ENST00000410465 CC2D2AQ9P2K1 1620 aa13.23□□□□□ -0.29
RN7SKP229-201ENST00000410465 DCAF8L2P0C7V8 631 aa13.21□□□□□ -0.29
RN7SKP229-201ENST00000410465 EIF4G1Q04637 1599 aaKnown RBP13□□□□□ -0.33
RN7SKP229-201ENST00000410465 TRIM41Q8WV44 630 aa12.95□□□□□ -0.34
RN7SKP229-201ENST00000410465 CUX2O14529 1486 aa12.91□□□□□ -0.34
RN7SKP229-201ENST00000410465 SHROOM4Q9ULL8 1493 aa12.91□□□□□ -0.34
RN7SKP229-201ENST00000410465 MYO15BQ96JP2 1530 aa12.86□□□□□ -0.35
RN7SKP229-201ENST00000410465 ERCC6Q03468 1493 aa12.72□□□□□ -0.37
RN7SKP229-201ENST00000410465 SCRIBQ14160 1630 aa12.68□□□□□ -0.38
RN7SKP229-201ENST00000410465 NESP48681 1621 aa12.44□□□□□ -0.42
RN7SKP229-201ENST00000410465 DCAF1Q9Y4B6 1507 aa12.43□□□□□ -0.42
RN7SKP229-201ENST00000410465 THOC2Q8NI27 1593 aaKnown RBP12.42□□□□□ -0.42
RN7SKP229-201ENST00000410465 ZCCHC6Q5VYS8 1495 aaKnown RBP12.41□□□□□ -0.42
RN7SKP229-201ENST00000410465 NCAPD3P42695 1498 aa12.34□□□□□ -0.43
RN7SKP229-201ENST00000410465 AEBP2Q6ZN18 517 aaPredicted RBP12.33□□□□□ -0.44
RN7SKP229-201ENST00000410465 SMARCA2P51531 1590 aa12.3□□□□□ -0.44
RN7SKP229-201ENST00000410465 OSCARQ8IYS5 282 aa12.25□□□□□ -0.45
RN7SKP229-201ENST00000410465 BAZ1AQ9NRL2 1556 aaPredicted RBP12.23□□□□□ -0.45
RN7SKP229-201ENST00000410465 KIF21AQ7Z4S6 1674 aa12.22□□□□□ -0.45
RN7SKP229-201ENST00000410465 ATAD2BQ9ULI0 1458 aa12.21□□□□□ -0.45
RN7SKP229-201ENST00000410465 RIMBP3CA6NJZ7 1639 aa12.17□□□□□ -0.46
RN7SKP229-201ENST00000410465 RIMBP3BA6NNM3 1639 aa12.17□□□□□ -0.46
RN7SKP229-201ENST00000410465 RIMBP3Q9UFD9 1639 aa12.17□□□□□ -0.46
RN7SKP229-201ENST00000410465 TRHP20396 242 aaPredicted RBP12.15□□□□□ -0.46
RN7SKP229-201ENST00000410465 HMGXB3Q12766 1538 aa12.15□□□□□ -0.46
RN7SKP229-201ENST00000410465 LAMC3Q9Y6N6 1575 aa12.14□□□□□ -0.47
RN7SKP229-201ENST00000410465 PDS5BQ9NTI5 1447 aa12.11□□□□□ -0.47
RN7SKP229-201ENST00000410465 MRC2Q9UBG0 1479 aa12.08□□□□□ -0.48
RN7SKP229-201ENST00000410465 ARHGEF11O15085 1522 aa12.06□□□□□ -0.48
RN7SKP229-201ENST00000410465 WDR62O43379 1518 aa12.06□□□□□ -0.48
RN7SKP229-201ENST00000410465 CYB5RLQ6IPT4 315 aa12.05□□□□□ -0.48
RN7SKP229-201ENST00000410465 BAZ1BQ9UIG0 1483 aaKnown RBP12.03□□□□□ -0.48
RN7SKP229-201ENST00000410465 ILDR1Q86SU0 546 aaPredicted RBP11.99□□□□□ -0.49
RN7SKP229-201ENST00000410465 SMARCA4P51532 1647 aa11.99□□□□□ -0.49
RN7SKP229-201ENST00000410465 CADPSQ9ULU8 1353 aa11.93□□□□□ -0.5
RN7SKP229-201ENST00000410465 ARAP1Q96P48 1450 aa11.9□□□□□ -0.5
RN7SKP229-201ENST00000410465 CEP164Q9UPV0 1460 aa11.87□□□□□ -0.51
RN7SKP229-201ENST00000410465 PEG3Q9GZU2 1588 aa11.85□□□□□ -0.51
RN7SKP229-201ENST00000410465 FANCD2Q9BXW9 1451 aa11.81□□□□□ -0.52
RN7SKP229-201ENST00000410465 URB2Q14146 1524 aaKnown RBP11.78□□□□□ -0.52
RN7SKP229-201ENST00000410465 ZNF608Q9ULD9 1512 aaPredicted RBP11.77□□□□□ -0.52
RN7SKP229-201ENST00000410465 MROH2BQ7Z745 1585 aa11.72□□□□□ -0.53
RN7SKP229-201ENST00000410465 RSF1Q96T23 1441 aaPredicted RBP11.7□□□□□ -0.54
RN7SKP229-201ENST00000410465 CHD1O14646 1710 aa11.69□□□□□ -0.54
RN7SKP229-201ENST00000410465 IFT140Q96RY7 1462 aa11.65□□□□□ -0.54
RN7SKP229-201ENST00000410465 FBLN2P98095 1184 aa11.65□□□□□ -0.54
RN7SKP229-201ENST00000410465 CFTRP13569 1480 aa11.63□□□□□ -0.55
RN7SKP229-201ENST00000410465 EIF4G3O43432 1585 aaKnown RBP11.62□□□□□ -0.55
RN7SKP229-201ENST00000410465 AQRO60306 1485 aaKnown RBP eCLIP11.57□□□□□ -0.56
RN7SKP229-201ENST00000410465 KDM4FA0A1W2PPD8 638 aa11.57□□□□□ -0.56
RN7SKP229-201ENST00000410465 WIZO95785 1651 aa11.54□□□□□ -0.56
RN7SKP229-201ENST00000410465 CLASP1Q7Z460 1538 aa11.53□□□□□ -0.56
RN7SKP229-201ENST00000410465 TOPBP1Q92547 1522 aa11.5□□□□□ -0.57
RN7SKP229-201ENST00000410465 GAPVD1Q14C86 1478 aa11.48□□□□□ -0.57
RN7SKP229-201ENST00000410465 TARBP1Q13395 1621 aaKnown RBP11.45□□□□□ -0.58
RN7SKP229-201ENST00000410465 KIF13AQ9H1H9 1805 aa11.42□□□□□ -0.58
RN7SKP229-201ENST00000410465 SYNJ1O43426 1573 aa11.42□□□□□ -0.58
RN7SKP229-201ENST00000410465 PRDM2Q13029 1718 aa11.41□□□□□ -0.58
RN7SKP229-201ENST00000410465 CHMP7Q8WUX9 453 aaPredicted RBP11.41□□□□□ -0.58
RN7SKP229-201ENST00000410465 SNAPC4Q5SXM2 1469 aa11.4□□□□□ -0.58
RN7SKP229-201ENST00000410465 TDRD9Q8NDG6 1382 aaKnown RBP11.39□□□□□ -0.59
RN7SKP229-201ENST00000410465 FBXO41Q8TF61 875 aa11.37□□□□□ -0.59
RN7SKP229-201ENST00000410465 DNMBPQ6XZF7 1577 aa11.37□□□□□ -0.59
RN7SKP229-201ENST00000410465 ABCC8Q09428 1581 aa11.36□□□□□ -0.59
RN7SKP229-201ENST00000410465 RAD54L2Q9Y4B4 1467 aa11.35□□□□□ -0.59
RN7SKP229-201ENST00000410465 ERCC6L2Q5T890 1561 aa11.35□□□□□ -0.59
RN7SKP229-201ENST00000410465 HECW2Q9P2P5 1572 aa11.34□□□□□ -0.59
RN7SKP229-201ENST00000410465 POLA1P09884 1462 aaPredicted RBP11.34□□□□□ -0.59
RN7SKP229-201ENST00000410465 FAM69CQ0P6D2 419 aa11.31□□□□□ -0.6
RN7SKP229-201ENST00000410465 LMTK3Q96Q04 1460 aa11.31□□□□□ -0.6
RN7SKP229-201ENST00000410465 MAGI1Q96QZ7 1491 aaPredicted RBP11.3□□□□□ -0.6
RN7SKP229-201ENST00000410465 TOP2AP11388 1531 aaKnown RBP11.3□□□□□ -0.6
RN7SKP229-201ENST00000410465 SYNJ2O15056 1496 aa11.29□□□□□ -0.6
RN7SKP229-201ENST00000410465 KDM6BO15054 1643 aa11.28□□□□□ -0.6
RN7SKP229-201ENST00000410465 SOGA1O94964 1423 aa11.27□□□□□ -0.6
RN7SKP229-201ENST00000410465 ADGRL1O94910 1474 aa11.25□□□□□ -0.61
RN7SKP229-201ENST00000410465 ABCC10Q5T3U5 1492 aa11.25□□□□□ -0.61
RN7SKP229-201ENST00000410465 SOCS7O14512 581 aa11.24□□□□□ -0.61
RN7SKP229-201ENST00000410465 ILDR2Q71H61 639 aa11.24□□□□□ -0.61
RN7SKP229-201ENST00000410465 GRIN2BQ13224 1484 aa11.24□□□□□ -0.61
RN7SKP229-201ENST00000410465 CCDC88BA6NC98 1476 aa11.22□□□□□ -0.61
RN7SKP229-201ENST00000410465 CEP170Q5SW79 1584 aa11.21□□□□□ -0.61
RN7SKP229-201ENST00000410465 WDR97A6NE52 1622 aa11.2□□□□□ -0.62
RN7SKP229-201ENST00000410465 DIP2BQ9P265 1576 aa11.2□□□□□ -0.62
RN7SKP229-201ENST00000410465 TSPOAP1O95153 1857 aa11.19□□□□□ -0.62
RN7SKP229-201ENST00000410465 FGD5Q6ZNL6 1462 aa11.17□□□□□ -0.62
RN7SKP229-201ENST00000410465 PBRM1Q86U86 1689 aa11.14□□□□□ -0.63
RN7SKP229-201ENST00000410465 NPM1P06748 294 aaKnown RBP eCLIP11.12□□□□□ -0.63
RN7SKP229-201ENST00000410465 MAPKBP1O60336 1514 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms