RNA–Protein interactions for RNA: ENST00000410465.1

RN7SKP229-201, Transcript of RNA, 7SK small nuclear pseudogene 229, humanhuman

BASIC

Gene RN7SKP229, Length 302 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP229-201ENST00000410465 NISCHQ9Y2I1 1504 aa15.17■□□□□ 0.02
RN7SKP229-201ENST00000410465 ABCC9O60706 1549 aa14.71□□□□□ -0.05
RN7SKP229-201ENST00000410465 DNAJC5BQ9UF47 199 aa14.54□□□□□ -0.08
RN7SKP229-201ENST00000410465 CCDC180Q9P1Z9 1646 aa13.88□□□□□ -0.19
RN7SKP229-201ENST00000410465 DNAJC5Q9H3Z4 198 aa13.83□□□□□ -0.2
RN7SKP229-201ENST00000410465 PABPN1Q86U42 306 aaKnown RBP eCLIP13.62□□□□□ -0.23
RN7SKP229-201ENST00000410465 RB1CC1Q8TDY2 1594 aa13.6□□□□□ -0.23
RN7SKP229-201ENST00000410465 UNC13AQ9UPW8 1703 aa13.33□□□□□ -0.27
RN7SKP229-201ENST00000410465 NACADO15069 1562 aa13.32□□□□□ -0.28
RN7SKP229-201ENST00000410465 CECR2Q9BXF3 1484 aa13.31□□□□□ -0.28
RN7SKP229-201ENST00000410465 BICRAQ9NZM4 1560 aa13.29□□□□□ -0.28
RN7SKP229-201ENST00000410465 CC2D2AQ9P2K1 1620 aa13.23□□□□□ -0.29
RN7SKP229-201ENST00000410465 DCAF8L2P0C7V8 631 aa13.21□□□□□ -0.29
RN7SKP229-201ENST00000410465 EIF4G1Q04637 1599 aaKnown RBP13□□□□□ -0.33
RN7SKP229-201ENST00000410465 TRIM41Q8WV44 630 aa12.95□□□□□ -0.34
RN7SKP229-201ENST00000410465 CUX2O14529 1486 aa12.91□□□□□ -0.34
RN7SKP229-201ENST00000410465 SHROOM4Q9ULL8 1493 aa12.91□□□□□ -0.34
RN7SKP229-201ENST00000410465 MYO15BQ96JP2 1530 aa12.86□□□□□ -0.35
RN7SKP229-201ENST00000410465 ERCC6Q03468 1493 aa12.72□□□□□ -0.37
RN7SKP229-201ENST00000410465 SCRIBQ14160 1630 aa12.68□□□□□ -0.38
RN7SKP229-201ENST00000410465 NESP48681 1621 aa12.44□□□□□ -0.42
RN7SKP229-201ENST00000410465 DCAF1Q9Y4B6 1507 aa12.43□□□□□ -0.42
RN7SKP229-201ENST00000410465 THOC2Q8NI27 1593 aaKnown RBP12.42□□□□□ -0.42
RN7SKP229-201ENST00000410465 ZCCHC6Q5VYS8 1495 aaKnown RBP12.41□□□□□ -0.42
RN7SKP229-201ENST00000410465 NCAPD3P42695 1498 aa12.34□□□□□ -0.43
RN7SKP229-201ENST00000410465 AEBP2Q6ZN18 517 aaPredicted RBP12.33□□□□□ -0.44
RN7SKP229-201ENST00000410465 SMARCA2P51531 1590 aa12.3□□□□□ -0.44
RN7SKP229-201ENST00000410465 OSCARQ8IYS5 282 aa12.25□□□□□ -0.45
RN7SKP229-201ENST00000410465 BAZ1AQ9NRL2 1556 aaPredicted RBP12.23□□□□□ -0.45
RN7SKP229-201ENST00000410465 KIF21AQ7Z4S6 1674 aa12.22□□□□□ -0.45
RN7SKP229-201ENST00000410465 ATAD2BQ9ULI0 1458 aa12.21□□□□□ -0.45
RN7SKP229-201ENST00000410465 RIMBP3CA6NJZ7 1639 aa12.17□□□□□ -0.46
RN7SKP229-201ENST00000410465 RIMBP3BA6NNM3 1639 aa12.17□□□□□ -0.46
RN7SKP229-201ENST00000410465 RIMBP3Q9UFD9 1639 aa12.17□□□□□ -0.46
RN7SKP229-201ENST00000410465 TRHP20396 242 aaPredicted RBP12.15□□□□□ -0.46
RN7SKP229-201ENST00000410465 HMGXB3Q12766 1538 aa12.15□□□□□ -0.46
RN7SKP229-201ENST00000410465 LAMC3Q9Y6N6 1575 aa12.14□□□□□ -0.47
RN7SKP229-201ENST00000410465 PDS5BQ9NTI5 1447 aa12.11□□□□□ -0.47
RN7SKP229-201ENST00000410465 MRC2Q9UBG0 1479 aa12.08□□□□□ -0.48
RN7SKP229-201ENST00000410465 ARHGEF11O15085 1522 aa12.06□□□□□ -0.48
RN7SKP229-201ENST00000410465 WDR62O43379 1518 aa12.06□□□□□ -0.48
RN7SKP229-201ENST00000410465 CYB5RLQ6IPT4 315 aa12.05□□□□□ -0.48
RN7SKP229-201ENST00000410465 BAZ1BQ9UIG0 1483 aaKnown RBP12.03□□□□□ -0.48
RN7SKP229-201ENST00000410465 ILDR1Q86SU0 546 aaPredicted RBP11.99□□□□□ -0.49
RN7SKP229-201ENST00000410465 SMARCA4P51532 1647 aa11.99□□□□□ -0.49
RN7SKP229-201ENST00000410465 CADPSQ9ULU8 1353 aa11.93□□□□□ -0.5
RN7SKP229-201ENST00000410465 ARAP1Q96P48 1450 aa11.9□□□□□ -0.5
RN7SKP229-201ENST00000410465 CEP164Q9UPV0 1460 aa11.87□□□□□ -0.51
RN7SKP229-201ENST00000410465 PEG3Q9GZU2 1588 aa11.85□□□□□ -0.51
RN7SKP229-201ENST00000410465 FANCD2Q9BXW9 1451 aa11.81□□□□□ -0.52
RN7SKP229-201ENST00000410465 URB2Q14146 1524 aaKnown RBP11.78□□□□□ -0.52
RN7SKP229-201ENST00000410465 ZNF608Q9ULD9 1512 aaPredicted RBP11.77□□□□□ -0.52
RN7SKP229-201ENST00000410465 MROH2BQ7Z745 1585 aa11.72□□□□□ -0.53
RN7SKP229-201ENST00000410465 RSF1Q96T23 1441 aaPredicted RBP11.7□□□□□ -0.54
RN7SKP229-201ENST00000410465 CHD1O14646 1710 aa11.69□□□□□ -0.54
RN7SKP229-201ENST00000410465 IFT140Q96RY7 1462 aa11.65□□□□□ -0.54
RN7SKP229-201ENST00000410465 FBLN2P98095 1184 aa11.65□□□□□ -0.54
RN7SKP229-201ENST00000410465 CFTRP13569 1480 aa11.63□□□□□ -0.55
RN7SKP229-201ENST00000410465 EIF4G3O43432 1585 aaKnown RBP11.62□□□□□ -0.55
RN7SKP229-201ENST00000410465 AQRO60306 1485 aaKnown RBP eCLIP11.57□□□□□ -0.56
RN7SKP229-201ENST00000410465 KDM4FA0A1W2PPD8 638 aa11.57□□□□□ -0.56
RN7SKP229-201ENST00000410465 WIZO95785 1651 aa11.54□□□□□ -0.56
RN7SKP229-201ENST00000410465 CLASP1Q7Z460 1538 aa11.53□□□□□ -0.56
RN7SKP229-201ENST00000410465 TOPBP1Q92547 1522 aa11.5□□□□□ -0.57
RN7SKP229-201ENST00000410465 GAPVD1Q14C86 1478 aa11.48□□□□□ -0.57
RN7SKP229-201ENST00000410465 TARBP1Q13395 1621 aaKnown RBP11.45□□□□□ -0.58
RN7SKP229-201ENST00000410465 KIF13AQ9H1H9 1805 aa11.42□□□□□ -0.58
RN7SKP229-201ENST00000410465 SYNJ1O43426 1573 aa11.42□□□□□ -0.58
RN7SKP229-201ENST00000410465 PRDM2Q13029 1718 aa11.41□□□□□ -0.58
RN7SKP229-201ENST00000410465 CHMP7Q8WUX9 453 aaPredicted RBP11.41□□□□□ -0.58
RN7SKP229-201ENST00000410465 SNAPC4Q5SXM2 1469 aa11.4□□□□□ -0.58
RN7SKP229-201ENST00000410465 TDRD9Q8NDG6 1382 aaKnown RBP11.39□□□□□ -0.59
RN7SKP229-201ENST00000410465 FBXO41Q8TF61 875 aa11.37□□□□□ -0.59
RN7SKP229-201ENST00000410465 DNMBPQ6XZF7 1577 aa11.37□□□□□ -0.59
RN7SKP229-201ENST00000410465 ABCC8Q09428 1581 aa11.36□□□□□ -0.59
RN7SKP229-201ENST00000410465 RAD54L2Q9Y4B4 1467 aa11.35□□□□□ -0.59
RN7SKP229-201ENST00000410465 ERCC6L2Q5T890 1561 aa11.35□□□□□ -0.59
RN7SKP229-201ENST00000410465 HECW2Q9P2P5 1572 aa11.34□□□□□ -0.59
RN7SKP229-201ENST00000410465 POLA1P09884 1462 aaPredicted RBP11.34□□□□□ -0.59
RN7SKP229-201ENST00000410465 FAM69CQ0P6D2 419 aa11.31□□□□□ -0.6
RN7SKP229-201ENST00000410465 LMTK3Q96Q04 1460 aa11.31□□□□□ -0.6
RN7SKP229-201ENST00000410465 MAGI1Q96QZ7 1491 aaPredicted RBP11.3□□□□□ -0.6
RN7SKP229-201ENST00000410465 TOP2AP11388 1531 aaKnown RBP11.3□□□□□ -0.6
RN7SKP229-201ENST00000410465 SYNJ2O15056 1496 aa11.29□□□□□ -0.6
RN7SKP229-201ENST00000410465 KDM6BO15054 1643 aa11.28□□□□□ -0.6
RN7SKP229-201ENST00000410465 SOGA1O94964 1423 aa11.27□□□□□ -0.6
RN7SKP229-201ENST00000410465 ADGRL1O94910 1474 aa11.25□□□□□ -0.61
RN7SKP229-201ENST00000410465 ABCC10Q5T3U5 1492 aa11.25□□□□□ -0.61
RN7SKP229-201ENST00000410465 SOCS7O14512 581 aa11.24□□□□□ -0.61
RN7SKP229-201ENST00000410465 ILDR2Q71H61 639 aa11.24□□□□□ -0.61
RN7SKP229-201ENST00000410465 GRIN2BQ13224 1484 aa11.24□□□□□ -0.61
RN7SKP229-201ENST00000410465 CCDC88BA6NC98 1476 aa11.22□□□□□ -0.61
RN7SKP229-201ENST00000410465 CEP170Q5SW79 1584 aa11.21□□□□□ -0.61
RN7SKP229-201ENST00000410465 WDR97A6NE52 1622 aa11.2□□□□□ -0.62
RN7SKP229-201ENST00000410465 DIP2BQ9P265 1576 aa11.2□□□□□ -0.62
RN7SKP229-201ENST00000410465 TSPOAP1O95153 1857 aa11.19□□□□□ -0.62
RN7SKP229-201ENST00000410465 FGD5Q6ZNL6 1462 aa11.17□□□□□ -0.62
RN7SKP229-201ENST00000410465 PBRM1Q86U86 1689 aa11.14□□□□□ -0.63
RN7SKP229-201ENST00000410465 NPM1P06748 294 aaKnown RBP eCLIP11.12□□□□□ -0.63
RN7SKP229-201ENST00000410465 MAPKBP1O60336 1514 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms