RNA–Protein interactions for RNA: ENST00000409967.6

ITGB6-204, Transcript of integrin subunit beta 6, humanhuman

TSL 3 BASIC

Gene ITGB6, Length 2,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB6-204ENST00000409967 NISCHQ9Y2I1 1504 aa26.43■■□□□ 1.82
ITGB6-204ENST00000409967 CCDC180Q9P1Z9 1646 aa23.15■■□□□ 1.3
ITGB6-204ENST00000409967 ZCCHC6Q5VYS8 1495 aaKnown RBP22.17■■□□□ 1.14
ITGB6-204ENST00000409967 ABCC9O60706 1549 aa22.12■■□□□ 1.13
ITGB6-204ENST00000409967 DCAF8L2P0C7V8 631 aa21.96■■□□□ 1.11
ITGB6-204ENST00000409967 DCAF1Q9Y4B6 1507 aa21.78■■□□□ 1.08
ITGB6-204ENST00000409967 MYO15BQ96JP2 1530 aa21.56■■□□□ 1.04
ITGB6-204ENST00000409967 NACADO15069 1562 aa21.56■■□□□ 1.04
ITGB6-204ENST00000409967 SHROOM4Q9ULL8 1493 aa21.55■■□□□ 1.04
ITGB6-204ENST00000409967 RB1CC1Q8TDY2 1594 aa21.46■■□□□ 1.03
ITGB6-204ENST00000409967 SCRIBQ14160 1630 aa21.35■■□□□ 1.01
ITGB6-204ENST00000409967 UNC13AQ9UPW8 1703 aa21.14■□□□□ 0.97
ITGB6-204ENST00000409967 BICRAQ9NZM4 1560 aa20.84■□□□□ 0.93
ITGB6-204ENST00000409967 PABPN1Q86U42 306 aaKnown RBP eCLIP20.81■□□□□ 0.92
ITGB6-204ENST00000409967 SUPT5HO00267 1087 aaKnown RBP20.6■□□□□ 0.89
ITGB6-204ENST00000409967 CECR2Q9BXF3 1484 aa20.6■□□□□ 0.89
ITGB6-204ENST00000409967 MROH2BQ7Z745 1585 aa20.45■□□□□ 0.86
ITGB6-204ENST00000409967 RSF1Q96T23 1441 aaPredicted RBP20.43■□□□□ 0.86
ITGB6-204ENST00000409967 BAZ1AQ9NRL2 1556 aaPredicted RBP20.42■□□□□ 0.86
ITGB6-204ENST00000409967 SMARCA4P51532 1647 aa20.4■□□□□ 0.86
ITGB6-204ENST00000409967 WIZO95785 1651 aa20.32■□□□□ 0.84
ITGB6-204ENST00000409967 PELP1Q8IZL8 1130 aaKnown RBP20.27■□□□□ 0.84
ITGB6-204ENST00000409967 EIF4G1Q04637 1599 aaKnown RBP20.23■□□□□ 0.83
ITGB6-204ENST00000409967 PEG3Q9GZU2 1588 aa20.09■□□□□ 0.81
ITGB6-204ENST00000409967 ATAD2BQ9ULI0 1458 aa20.06■□□□□ 0.8
ITGB6-204ENST00000409967 SMARCA2P51531 1590 aa20.04■□□□□ 0.8
ITGB6-204ENST00000409967 TOP2AP11388 1531 aaKnown RBP20.04■□□□□ 0.8
ITGB6-204ENST00000409967 CC2D2AQ9P2K1 1620 aa20■□□□□ 0.79
ITGB6-204ENST00000409967 BAZ1BQ9UIG0 1483 aaKnown RBP19.97■□□□□ 0.79
ITGB6-204ENST00000409967 NCAPD3P42695 1498 aa19.88■□□□□ 0.77
ITGB6-204ENST00000409967 HMGXB3Q12766 1538 aa19.87■□□□□ 0.77
ITGB6-204ENST00000409967 CCDC88BA6NC98 1476 aa19.83■□□□□ 0.77
ITGB6-204ENST00000409967 MYT1Q01538 1121 aa19.83■□□□□ 0.76
ITGB6-204ENST00000409967 DNAJC5BQ9UF47 199 aa19.64■□□□□ 0.73
ITGB6-204ENST00000409967 CHIC1Q5VXU3 224 aa19.55■□□□□ 0.72
ITGB6-204ENST00000409967 HRCP23327 699 aa19.48■□□□□ 0.71
ITGB6-204ENST00000409967 ABCC8Q09428 1581 aa19.44■□□□□ 0.7
ITGB6-204ENST00000409967 CFTRP13569 1480 aa19.41■□□□□ 0.7
ITGB6-204ENST00000409967 PRDM2Q13029 1718 aa19.4■□□□□ 0.7
ITGB6-204ENST00000409967 CADPSQ9ULU8 1353 aa19.37■□□□□ 0.69
ITGB6-204ENST00000409967 NESP48681 1621 aa19.37■□□□□ 0.69
ITGB6-204ENST00000409967 TRIM41Q8WV44 630 aa19.32■□□□□ 0.68
ITGB6-204ENST00000409967 LAMC3Q9Y6N6 1575 aa19.28■□□□□ 0.68
ITGB6-204ENST00000409967 WRNQ14191 1432 aaPredicted RBP eCLIP19.25■□□□□ 0.67
ITGB6-204ENST00000409967 SYNJ1O43426 1573 aa19.24■□□□□ 0.67
ITGB6-204ENST00000409967 FANCD2Q9BXW9 1451 aa19.2■□□□□ 0.66
ITGB6-204ENST00000409967 KIF21AQ7Z4S6 1674 aa19.17■□□□□ 0.66
ITGB6-204ENST00000409967 CUX1P39880 1505 aa19.14■□□□□ 0.65
ITGB6-204ENST00000409967 TOP2BQ02880 1626 aa19.13■□□□□ 0.65
ITGB6-204ENST00000409967 BIVM-ERCC5R4GMW8 1640 aa19.12■□□□□ 0.65
ITGB6-204ENST00000409967 CEP164Q9UPV0 1460 aa19.11■□□□□ 0.65
ITGB6-204ENST00000409967 PDS5BQ9NTI5 1447 aa19.11■□□□□ 0.65
ITGB6-204ENST00000409967 FAM9AQ8IZU1 332 aaPredicted RBP19.05■□□□□ 0.64
ITGB6-204ENST00000409967 DNMBPQ6XZF7 1577 aa19.01■□□□□ 0.63
ITGB6-204ENST00000409967 URB2Q14146 1524 aaKnown RBP19■□□□□ 0.63
ITGB6-204ENST00000409967 SOGA1O94964 1423 aa18.98■□□□□ 0.63
ITGB6-204ENST00000409967 TOPBP1Q92547 1522 aa18.98■□□□□ 0.63
ITGB6-204ENST00000409967 ERCC6Q03468 1493 aa18.97■□□□□ 0.63
ITGB6-204ENST00000409967 FGD5Q6ZNL6 1462 aa18.96■□□□□ 0.63
ITGB6-204ENST00000409967 TTBK1Q5TCY1 1321 aaPredicted RBP18.95■□□□□ 0.62
ITGB6-204ENST00000409967 RUSC2Q8N2Y8 1516 aa18.94■□□□□ 0.62
ITGB6-204ENST00000409967 MRC2Q9UBG0 1479 aa18.91■□□□□ 0.62
ITGB6-204ENST00000409967 POLA1P09884 1462 aaPredicted RBP18.88■□□□□ 0.61
ITGB6-204ENST00000409967 EHMT2Q96KQ7 1210 aa18.87■□□□□ 0.61
ITGB6-204ENST00000409967 LOC105371045A0A1W2PR82 267 aa18.86■□□□□ 0.61
ITGB6-204ENST00000409967 THOC2Q8NI27 1593 aaKnown RBP18.85■□□□□ 0.61
ITGB6-204ENST00000409967 RAD54L2Q9Y4B4 1467 aa18.85■□□□□ 0.61
ITGB6-204ENST00000409967 WDR62O43379 1518 aa18.82■□□□□ 0.6
ITGB6-204ENST00000409967 SCAF1Q9H7N4 1312 aaKnown RBP18.82■□□□□ 0.6
ITGB6-204ENST00000409967 EEA1Q15075 1411 aa18.8■□□□□ 0.6
ITGB6-204ENST00000409967 CUX2O14529 1486 aa18.8■□□□□ 0.6
ITGB6-204ENST00000409967 PPARGC1BQ86YN6 1023 aaKnown RBP18.79■□□□□ 0.6
ITGB6-204ENST00000409967 WDR97A6NE52 1622 aa18.77■□□□□ 0.6
ITGB6-204ENST00000409967 KIF27Q86VH2 1401 aa18.75■□□□□ 0.59
ITGB6-204ENST00000409967 CSRNP3Q8WYN3 585 aa18.75■□□□□ 0.59
ITGB6-204ENST00000409967 ABCA10Q8WWZ4 1543 aa18.74■□□□□ 0.59
ITGB6-204ENST00000409967 TARBP1Q13395 1621 aaKnown RBP18.73■□□□□ 0.59
ITGB6-204ENST00000409967 TDRD9Q8NDG6 1382 aaKnown RBP18.66■□□□□ 0.58
ITGB6-204ENST00000409967 ABCA5Q8WWZ7 1642 aa18.65■□□□□ 0.58
ITGB6-204ENST00000409967 KIF21BO75037 1637 aa18.65■□□□□ 0.58
ITGB6-204ENST00000409967 IFT140Q96RY7 1462 aa18.62■□□□□ 0.57
ITGB6-204ENST00000409967 GOLGA3Q08378 1498 aa18.61■□□□□ 0.57
ITGB6-204ENST00000409967 RAPGEF2Q9Y4G8 1499 aa18.61■□□□□ 0.57
ITGB6-204ENST00000409967 ZNF608Q9ULD9 1512 aaPredicted RBP18.6■□□□□ 0.57
ITGB6-204ENST00000409967 IGF1RP08069 1367 aa18.59■□□□□ 0.57
ITGB6-204ENST00000409967 GAPVD1Q14C86 1478 aa18.59■□□□□ 0.57
ITGB6-204ENST00000409967 PBRM1Q86U86 1689 aa18.59■□□□□ 0.57
ITGB6-204ENST00000409967 AQRO60306 1485 aaKnown RBP eCLIP18.58■□□□□ 0.56
ITGB6-204ENST00000409967 PRXQ9BXM0 1461 aa18.58■□□□□ 0.56
ITGB6-204ENST00000409967 EIF4G3O43432 1585 aaKnown RBP18.56■□□□□ 0.56
ITGB6-204ENST00000409967 UBTFP17480 764 aaKnown RBP18.55■□□□□ 0.56
ITGB6-204ENST00000409967 ERICH3Q5RHP9 1530 aa18.53■□□□□ 0.56
ITGB6-204ENST00000409967 CUL7Q14999 1698 aa18.52■□□□□ 0.56
ITGB6-204ENST00000409967 CARMIL1Q5VZK9 1371 aa18.51■□□□□ 0.55
ITGB6-204ENST00000409967 PCGF6Q9BYE7 350 aa18.47■□□□□ 0.55
ITGB6-204ENST00000409967 TNIKQ9UKE5 1360 aa18.46■□□□□ 0.55
ITGB6-204ENST00000409967 GRIN2BQ13224 1484 aa18.46■□□□□ 0.55
ITGB6-204ENST00000409967 ADAMTS12P58397 1594 aa18.43■□□□□ 0.54
ITGB6-204ENST00000409967 CEP162Q5TB80 1403 aa18.42■□□□□ 0.54
ITGB6-204ENST00000409967 RANGAP1P46060 587 aaPredicted RBP18.41■□□□□ 0.54
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