RNA–Protein interactions for RNA: ENST00000409740.3

SLC3A1-206, Transcript of solute carrier family 3 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC3A1, Length 1,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-206ENST00000409740 NISCHQ9Y2I1 1504 aa16.38■□□□□ 0.21
SLC3A1-206ENST00000409740 CCDC180Q9P1Z9 1646 aa14.42□□□□□ -0.1
SLC3A1-206ENST00000409740 ZCCHC6Q5VYS8 1495 aaKnown RBP13.78□□□□□ -0.2
SLC3A1-206ENST00000409740 ABCC9O60706 1549 aa13.61□□□□□ -0.23
SLC3A1-206ENST00000409740 DCAF1Q9Y4B6 1507 aa13.54□□□□□ -0.24
SLC3A1-206ENST00000409740 MYO15BQ96JP2 1530 aa13.4□□□□□ -0.26
SLC3A1-206ENST00000409740 DCAF8L2P0C7V8 631 aa13.39□□□□□ -0.27
SLC3A1-206ENST00000409740 NACADO15069 1562 aa13.36□□□□□ -0.27
SLC3A1-206ENST00000409740 AEBP2Q6ZN18 517 aaPredicted RBP13.3□□□□□ -0.28
SLC3A1-206ENST00000409740 RB1CC1Q8TDY2 1594 aa13.28□□□□□ -0.28
SLC3A1-206ENST00000409740 SHROOM4Q9ULL8 1493 aa13.27□□□□□ -0.28
SLC3A1-206ENST00000409740 SCRIBQ14160 1630 aa13.23□□□□□ -0.29
SLC3A1-206ENST00000409740 UNC13AQ9UPW8 1703 aa13.17□□□□□ -0.3
SLC3A1-206ENST00000409740 BICRAQ9NZM4 1560 aa12.93□□□□□ -0.34
SLC3A1-206ENST00000409740 CECR2Q9BXF3 1484 aa12.74□□□□□ -0.37
SLC3A1-206ENST00000409740 PABPN1Q86U42 306 aaKnown RBP eCLIP12.73□□□□□ -0.37
SLC3A1-206ENST00000409740 MROH2BQ7Z745 1585 aa12.68□□□□□ -0.38
SLC3A1-206ENST00000409740 SMARCA4P51532 1647 aa12.67□□□□□ -0.38
SLC3A1-206ENST00000409740 BAZ1AQ9NRL2 1556 aaPredicted RBP12.66□□□□□ -0.38
SLC3A1-206ENST00000409740 SUPT5HO00267 1087 aaKnown RBP12.65□□□□□ -0.38
SLC3A1-206ENST00000409740 RSF1Q96T23 1441 aaPredicted RBP12.64□□□□□ -0.39
SLC3A1-206ENST00000409740 WIZO95785 1651 aa12.61□□□□□ -0.39
SLC3A1-206ENST00000409740 EIF4G1Q04637 1599 aaKnown RBP12.52□□□□□ -0.41
SLC3A1-206ENST00000409740 PEG3Q9GZU2 1588 aa12.49□□□□□ -0.41
SLC3A1-206ENST00000409740 TOP2AP11388 1531 aaKnown RBP12.46□□□□□ -0.42
SLC3A1-206ENST00000409740 SMARCA2P51531 1590 aa12.41□□□□□ -0.42
SLC3A1-206ENST00000409740 ATAD2BQ9ULI0 1458 aa12.41□□□□□ -0.42
SLC3A1-206ENST00000409740 CHIC1Q5VXU3 224 aa12.37□□□□□ -0.43
SLC3A1-206ENST00000409740 CC2D2AQ9P2K1 1620 aa12.36□□□□□ -0.43
SLC3A1-206ENST00000409740 BAZ1BQ9UIG0 1483 aaKnown RBP12.34□□□□□ -0.43
SLC3A1-206ENST00000409740 HMGXB3Q12766 1538 aa12.34□□□□□ -0.43
SLC3A1-206ENST00000409740 NCAPD3P42695 1498 aa12.27□□□□□ -0.44
SLC3A1-206ENST00000409740 CCDC88BA6NC98 1476 aa12.26□□□□□ -0.45
SLC3A1-206ENST00000409740 PRDM2Q13029 1718 aa12.13□□□□□ -0.47
SLC3A1-206ENST00000409740 ABCC8Q09428 1581 aa12.05□□□□□ -0.48
SLC3A1-206ENST00000409740 CFTRP13569 1480 aa12□□□□□ -0.49
SLC3A1-206ENST00000409740 DNAJC5BQ9UF47 199 aa12□□□□□ -0.49
SLC3A1-206ENST00000409740 SYNJ1O43426 1573 aa11.96□□□□□ -0.5
SLC3A1-206ENST00000409740 NESP48681 1621 aa11.95□□□□□ -0.5
SLC3A1-206ENST00000409740 LAMC3Q9Y6N6 1575 aa11.94□□□□□ -0.5
SLC3A1-206ENST00000409740 CADPSQ9ULU8 1353 aa11.93□□□□□ -0.5
SLC3A1-206ENST00000409740 BIVM-ERCC5R4GMW8 1640 aa11.92□□□□□ -0.5
SLC3A1-206ENST00000409740 WRNQ14191 1432 aaPredicted RBP eCLIP11.9□□□□□ -0.5
SLC3A1-206ENST00000409740 KIF21AQ7Z4S6 1674 aa11.9□□□□□ -0.5
SLC3A1-206ENST00000409740 TOP2BQ02880 1626 aa11.89□□□□□ -0.51
SLC3A1-206ENST00000409740 CUX1P39880 1505 aa11.86□□□□□ -0.51
SLC3A1-206ENST00000409740 TRIM41Q8WV44 630 aa11.86□□□□□ -0.51
SLC3A1-206ENST00000409740 FANCD2Q9BXW9 1451 aa11.86□□□□□ -0.51
SLC3A1-206ENST00000409740 CEP164Q9UPV0 1460 aa11.8□□□□□ -0.52
SLC3A1-206ENST00000409740 DNMBPQ6XZF7 1577 aa11.78□□□□□ -0.52
SLC3A1-206ENST00000409740 PDS5BQ9NTI5 1447 aa11.75□□□□□ -0.53
SLC3A1-206ENST00000409740 URB2Q14146 1524 aaKnown RBP11.75□□□□□ -0.53
SLC3A1-206ENST00000409740 TOPBP1Q92547 1522 aa11.74□□□□□ -0.53
SLC3A1-206ENST00000409740 FGD5Q6ZNL6 1462 aa11.73□□□□□ -0.53
SLC3A1-206ENST00000409740 RUSC2Q8N2Y8 1516 aa11.73□□□□□ -0.53
SLC3A1-206ENST00000409740 SOGA1O94964 1423 aa11.73□□□□□ -0.53
SLC3A1-206ENST00000409740 WDR97A6NE52 1622 aa11.72□□□□□ -0.53
SLC3A1-206ENST00000409740 THOC2Q8NI27 1593 aaKnown RBP11.7□□□□□ -0.54
SLC3A1-206ENST00000409740 MRC2Q9UBG0 1479 aa11.69□□□□□ -0.54
SLC3A1-206ENST00000409740 FAM9AQ8IZU1 332 aaPredicted RBP11.69□□□□□ -0.54
SLC3A1-206ENST00000409740 POLA1P09884 1462 aaPredicted RBP11.68□□□□□ -0.54
SLC3A1-206ENST00000409740 EEA1Q15075 1411 aa11.66□□□□□ -0.54
SLC3A1-206ENST00000409740 WDR62O43379 1518 aa11.66□□□□□ -0.54
SLC3A1-206ENST00000409740 ERCC6Q03468 1493 aa11.65□□□□□ -0.54
SLC3A1-206ENST00000409740 RAD54L2Q9Y4B4 1467 aa11.63□□□□□ -0.55
SLC3A1-206ENST00000409740 KIF21BO75037 1637 aa11.63□□□□□ -0.55
SLC3A1-206ENST00000409740 TARBP1Q13395 1621 aaKnown RBP11.62□□□□□ -0.55
SLC3A1-206ENST00000409740 ABCA10Q8WWZ4 1543 aa11.61□□□□□ -0.55
SLC3A1-206ENST00000409740 CUX2O14529 1486 aa11.61□□□□□ -0.55
SLC3A1-206ENST00000409740 ABCA5Q8WWZ7 1642 aa11.6□□□□□ -0.55
SLC3A1-206ENST00000409740 LOC105371045A0A1W2PR82 267 aa11.6□□□□□ -0.55
SLC3A1-206ENST00000409740 KIF27Q86VH2 1401 aa11.58□□□□□ -0.56
SLC3A1-206ENST00000409740 PBRM1Q86U86 1689 aa11.57□□□□□ -0.56
SLC3A1-206ENST00000409740 EHMT2Q96KQ7 1210 aa11.55□□□□□ -0.56
SLC3A1-206ENST00000409740 CSRNP3Q8WYN3 585 aa11.54□□□□□ -0.56
SLC3A1-206ENST00000409740 GOLGA3Q08378 1498 aa11.54□□□□□ -0.56
SLC3A1-206ENST00000409740 ERICH3Q5RHP9 1530 aa11.53□□□□□ -0.56
SLC3A1-206ENST00000409740 RAPGEF2Q9Y4G8 1499 aa11.52□□□□□ -0.56
SLC3A1-206ENST00000409740 CUL7Q14999 1698 aa11.52□□□□□ -0.56
SLC3A1-206ENST00000409740 EIF4G3O43432 1585 aaKnown RBP11.52□□□□□ -0.57
SLC3A1-206ENST00000409740 PRXQ9BXM0 1461 aa11.52□□□□□ -0.57
SLC3A1-206ENST00000409740 IFT140Q96RY7 1462 aa11.5□□□□□ -0.57
SLC3A1-206ENST00000409740 ZNF608Q9ULD9 1512 aaPredicted RBP11.48□□□□□ -0.57
SLC3A1-206ENST00000409740 GAPVD1Q14C86 1478 aa11.48□□□□□ -0.57
SLC3A1-206ENST00000409740 TDRD9Q8NDG6 1382 aaKnown RBP11.47□□□□□ -0.57
SLC3A1-206ENST00000409740 ADAMTS12P58397 1594 aa11.46□□□□□ -0.58
SLC3A1-206ENST00000409740 IGF1RP08069 1367 aa11.46□□□□□ -0.58
SLC3A1-206ENST00000409740 CTTNBP2Q8WZ74 1663 aa11.44□□□□□ -0.58
SLC3A1-206ENST00000409740 TNIKQ9UKE5 1360 aa11.43□□□□□ -0.58
SLC3A1-206ENST00000409740 AQRO60306 1485 aaKnown RBP eCLIP11.43□□□□□ -0.58
SLC3A1-206ENST00000409740 CEP162Q5TB80 1403 aa11.42□□□□□ -0.58
SLC3A1-206ENST00000409740 CARMIL1Q5VZK9 1371 aa11.41□□□□□ -0.58
SLC3A1-206ENST00000409740 GRIN2BQ13224 1484 aa11.4□□□□□ -0.58
SLC3A1-206ENST00000409740 SNAPC4Q5SXM2 1469 aa11.38□□□□□ -0.59
SLC3A1-206ENST00000409740 UBTFP17480 764 aaKnown RBP11.37□□□□□ -0.59
SLC3A1-206ENST00000409740 SENP3Q9H4L4 574 aaPredicted RBP11.35□□□□□ -0.59
SLC3A1-206ENST00000409740 FHAD1B1AJZ9 1412 aa11.34□□□□□ -0.59
SLC3A1-206ENST00000409740 MAGI1Q96QZ7 1491 aaPredicted RBP11.33□□□□□ -0.6
SLC3A1-206ENST00000409740 CLIP1P30622 1438 aa11.33□□□□□ -0.6
SLC3A1-206ENST00000409740 CHD1O14646 1710 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms