RNA–Protein interactions for RNA: ENST00000409159.2

RAB1C-201, Transcript of RAB1C, member RAS oncogene family pseudogene, humanhuman

BASIC

Gene RAB1C, Length 606 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1C-201ENST00000409159 NISCHQ9Y2I1 1504 aa25.87■■□□□ 1.73
RAB1C-201ENST00000409159 CCDC180Q9P1Z9 1646 aa22.64■■□□□ 1.22
RAB1C-201ENST00000409159 ZCCHC6Q5VYS8 1495 aaKnown RBP21.69■■□□□ 1.06
RAB1C-201ENST00000409159 DCAF1Q9Y4B6 1507 aa21.53■■□□□ 1.04
RAB1C-201ENST00000409159 ABCC9O60706 1549 aa21.45■■□□□ 1.02
RAB1C-201ENST00000409159 MYO15BQ96JP2 1530 aa21.4■■□□□ 1.02
RAB1C-201ENST00000409159 DCAF8L2P0C7V8 631 aa21.24■□□□□ 0.99
RAB1C-201ENST00000409159 NACADO15069 1562 aa21.21■□□□□ 0.99
RAB1C-201ENST00000409159 RB1CC1Q8TDY2 1594 aa21.02■□□□□ 0.95
RAB1C-201ENST00000409159 SHROOM4Q9ULL8 1493 aa20.7■□□□□ 0.9
RAB1C-201ENST00000409159 SCRIBQ14160 1630 aa20.61■□□□□ 0.89
RAB1C-201ENST00000409159 UNC13AQ9UPW8 1703 aa20.32■□□□□ 0.84
RAB1C-201ENST00000409159 BICRAQ9NZM4 1560 aa20.29■□□□□ 0.84
RAB1C-201ENST00000409159 PABPN1Q86U42 306 aaKnown RBP eCLIP20.18■□□□□ 0.82
RAB1C-201ENST00000409159 BAZ1AQ9NRL2 1556 aaPredicted RBP20.01■□□□□ 0.79
RAB1C-201ENST00000409159 CECR2Q9BXF3 1484 aa20■□□□□ 0.79
RAB1C-201ENST00000409159 RSF1Q96T23 1441 aaPredicted RBP19.97■□□□□ 0.79
RAB1C-201ENST00000409159 SUPT5HO00267 1087 aaKnown RBP19.89■□□□□ 0.77
RAB1C-201ENST00000409159 MROH2BQ7Z745 1585 aa19.88■□□□□ 0.77
RAB1C-201ENST00000409159 SMARCA4P51532 1647 aa19.86■□□□□ 0.77
RAB1C-201ENST00000409159 PEG3Q9GZU2 1588 aa19.74■□□□□ 0.75
RAB1C-201ENST00000409159 EIF4G1Q04637 1599 aaKnown RBP19.73■□□□□ 0.75
RAB1C-201ENST00000409159 SMARCA2P51531 1590 aa19.67■□□□□ 0.74
RAB1C-201ENST00000409159 ATAD2BQ9ULI0 1458 aa19.66■□□□□ 0.74
RAB1C-201ENST00000409159 WIZO95785 1651 aa19.62■□□□□ 0.73
RAB1C-201ENST00000409159 NCAPD3P42695 1498 aa19.6■□□□□ 0.73
RAB1C-201ENST00000409159 TOP2AP11388 1531 aaKnown RBP19.58■□□□□ 0.73
RAB1C-201ENST00000409159 HMGXB3Q12766 1538 aa19.51■□□□□ 0.71
RAB1C-201ENST00000409159 BAZ1BQ9UIG0 1483 aaKnown RBP19.5■□□□□ 0.71
RAB1C-201ENST00000409159 CC2D2AQ9P2K1 1620 aa19.43■□□□□ 0.7
RAB1C-201ENST00000409159 CCDC88BA6NC98 1476 aa19.35■□□□□ 0.69
RAB1C-201ENST00000409159 DNAJC5BQ9UF47 199 aa19.09■□□□□ 0.65
RAB1C-201ENST00000409159 CFTRP13569 1480 aa19.07■□□□□ 0.64
RAB1C-201ENST00000409159 CADPSQ9ULU8 1353 aa19.06■□□□□ 0.64
RAB1C-201ENST00000409159 CHIC1Q5VXU3 224 aa19.05■□□□□ 0.64
RAB1C-201ENST00000409159 LAMC3Q9Y6N6 1575 aa18.9■□□□□ 0.62
RAB1C-201ENST00000409159 TRIM41Q8WV44 630 aa18.85■□□□□ 0.61
RAB1C-201ENST00000409159 WRNQ14191 1432 aaPredicted RBP eCLIP18.82■□□□□ 0.6
RAB1C-201ENST00000409159 PDS5BQ9NTI5 1447 aa18.82■□□□□ 0.6
RAB1C-201ENST00000409159 PRDM2Q13029 1718 aa18.77■□□□□ 0.6
RAB1C-201ENST00000409159 FANCD2Q9BXW9 1451 aa18.77■□□□□ 0.59
RAB1C-201ENST00000409159 NESP48681 1621 aa18.74■□□□□ 0.59
RAB1C-201ENST00000409159 ABCC8Q09428 1581 aa18.72■□□□□ 0.59
RAB1C-201ENST00000409159 CEP164Q9UPV0 1460 aa18.68■□□□□ 0.58
RAB1C-201ENST00000409159 TOP2BQ02880 1626 aa18.66■□□□□ 0.58
RAB1C-201ENST00000409159 SYNJ1O43426 1573 aa18.63■□□□□ 0.57
RAB1C-201ENST00000409159 CUX1P39880 1505 aa18.62■□□□□ 0.57
RAB1C-201ENST00000409159 BIVM-ERCC5R4GMW8 1640 aa18.61■□□□□ 0.57
RAB1C-201ENST00000409159 EEA1Q15075 1411 aa18.57■□□□□ 0.56
RAB1C-201ENST00000409159 DNMBPQ6XZF7 1577 aa18.57■□□□□ 0.56
RAB1C-201ENST00000409159 TOPBP1Q92547 1522 aa18.54■□□□□ 0.56
RAB1C-201ENST00000409159 MRC2Q9UBG0 1479 aa18.52■□□□□ 0.56
RAB1C-201ENST00000409159 URB2Q14146 1524 aaKnown RBP18.5■□□□□ 0.55
RAB1C-201ENST00000409159 ERCC6Q03468 1493 aa18.48■□□□□ 0.55
RAB1C-201ENST00000409159 KIF21AQ7Z4S6 1674 aa18.46■□□□□ 0.55
RAB1C-201ENST00000409159 FGD5Q6ZNL6 1462 aa18.46■□□□□ 0.54
RAB1C-201ENST00000409159 SOGA1O94964 1423 aa18.42■□□□□ 0.54
RAB1C-201ENST00000409159 POLA1P09884 1462 aaPredicted RBP18.42■□□□□ 0.54
RAB1C-201ENST00000409159 WDR62O43379 1518 aa18.42■□□□□ 0.54
RAB1C-201ENST00000409159 KIF27Q86VH2 1401 aa18.4■□□□□ 0.54
RAB1C-201ENST00000409159 CSRNP3Q8WYN3 585 aa18.39■□□□□ 0.53
RAB1C-201ENST00000409159 ABCA10Q8WWZ4 1543 aa18.38■□□□□ 0.53
RAB1C-201ENST00000409159 THOC2Q8NI27 1593 aaKnown RBP18.33■□□□□ 0.52
RAB1C-201ENST00000409159 FAM9AQ8IZU1 332 aaPredicted RBP18.31■□□□□ 0.52
RAB1C-201ENST00000409159 CUX2O14529 1486 aa18.31■□□□□ 0.52
RAB1C-201ENST00000409159 RUSC2Q8N2Y8 1516 aa18.3■□□□□ 0.52
RAB1C-201ENST00000409159 IFT140Q96RY7 1462 aa18.3■□□□□ 0.52
RAB1C-201ENST00000409159 RAD54L2Q9Y4B4 1467 aa18.28■□□□□ 0.52
RAB1C-201ENST00000409159 WDR97A6NE52 1622 aa18.25■□□□□ 0.51
RAB1C-201ENST00000409159 IGF1RP08069 1367 aa18.25■□□□□ 0.51
RAB1C-201ENST00000409159 TARBP1Q13395 1621 aaKnown RBP18.23■□□□□ 0.51
RAB1C-201ENST00000409159 PRXQ9BXM0 1461 aa18.22■□□□□ 0.51
RAB1C-201ENST00000409159 KIF21BO75037 1637 aa18.2■□□□□ 0.5
RAB1C-201ENST00000409159 LOC105371045A0A1W2PR82 267 aa18.18■□□□□ 0.5
RAB1C-201ENST00000409159 GOLGA3Q08378 1498 aa18.18■□□□□ 0.5
RAB1C-201ENST00000409159 GAPVD1Q14C86 1478 aa18.18■□□□□ 0.5
RAB1C-201ENST00000409159 ERICH3Q5RHP9 1530 aa18.17■□□□□ 0.5
RAB1C-201ENST00000409159 TDRD9Q8NDG6 1382 aaKnown RBP18.17■□□□□ 0.5
RAB1C-201ENST00000409159 ABCA5Q8WWZ7 1642 aa18.16■□□□□ 0.5
RAB1C-201ENST00000409159 CARMIL1Q5VZK9 1371 aa18.14■□□□□ 0.49
RAB1C-201ENST00000409159 TNIKQ9UKE5 1360 aa18.14■□□□□ 0.49
RAB1C-201ENST00000409159 GRIN2BQ13224 1484 aa18.11■□□□□ 0.49
RAB1C-201ENST00000409159 RAPGEF2Q9Y4G8 1499 aa18.1■□□□□ 0.49
RAB1C-201ENST00000409159 CUL7Q14999 1698 aa18.08■□□□□ 0.48
RAB1C-201ENST00000409159 AQRO60306 1485 aaKnown RBP eCLIP18.07■□□□□ 0.48
RAB1C-201ENST00000409159 ZNF608Q9ULD9 1512 aaPredicted RBP18.05■□□□□ 0.48
RAB1C-201ENST00000409159 UBTFP17480 764 aaKnown RBP18.04■□□□□ 0.48
RAB1C-201ENST00000409159 FHAD1B1AJZ9 1412 aa18.04■□□□□ 0.48
RAB1C-201ENST00000409159 MAGI1Q96QZ7 1491 aaPredicted RBP18■□□□□ 0.47
RAB1C-201ENST00000409159 EIF4G3O43432 1585 aaKnown RBP17.99■□□□□ 0.47
RAB1C-201ENST00000409159 PBRM1Q86U86 1689 aa17.94■□□□□ 0.46
RAB1C-201ENST00000409159 ADAMTS12P58397 1594 aa17.94■□□□□ 0.46
RAB1C-201ENST00000409159 CEP162Q5TB80 1403 aa17.92■□□□□ 0.46
RAB1C-201ENST00000409159 SNAPC4Q5SXM2 1469 aa17.92■□□□□ 0.46
RAB1C-201ENST00000409159 EHMT2Q96KQ7 1210 aa17.91■□□□□ 0.46
RAB1C-201ENST00000409159 SYNJ2O15056 1496 aa17.9■□□□□ 0.46
RAB1C-201ENST00000409159 CLIP1P30622 1438 aa17.86■□□□□ 0.45
RAB1C-201ENST00000409159 GRIN2AQ12879 1464 aa17.84■□□□□ 0.45
RAB1C-201ENST00000409159 CHMP7Q8WUX9 453 aaPredicted RBP17.84■□□□□ 0.45
RAB1C-201ENST00000409159 KIAA0586Q9BVV6 1533 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms