RNA–Protein interactions for RNA: ENST00000407870.1

CYCSP17-201, Transcript of cytochrome c, somatic pseudogene 17, humanhuman

BASIC

Gene CYCSP17, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP17-201ENST00000407870 NISCHQ9Y2I1 1504 aa15.57■□□□□ 0.08
CYCSP17-201ENST00000407870 AEBP2Q6ZN18 517 aaPredicted RBP14.22□□□□□ -0.13
CYCSP17-201ENST00000407870 CCDC180Q9P1Z9 1646 aa13.63□□□□□ -0.23
CYCSP17-201ENST00000407870 CHIC1Q5VXU3 224 aa13.45□□□□□ -0.26
CYCSP17-201ENST00000407870 ABCC9O60706 1549 aa13.2□□□□□ -0.3
CYCSP17-201ENST00000407870 DCAF8L2P0C7V8 631 aa13.2□□□□□ -0.3
CYCSP17-201ENST00000407870 ZCCHC6Q5VYS8 1495 aaKnown RBP12.99□□□□□ -0.33
CYCSP17-201ENST00000407870 DCAF1Q9Y4B6 1507 aa12.83□□□□□ -0.35
CYCSP17-201ENST00000407870 NACADO15069 1562 aa12.81□□□□□ -0.36
CYCSP17-201ENST00000407870 MYO15BQ96JP2 1530 aa12.78□□□□□ -0.36
CYCSP17-201ENST00000407870 RB1CC1Q8TDY2 1594 aa12.77□□□□□ -0.36
CYCSP17-201ENST00000407870 SHROOM4Q9ULL8 1493 aa12.66□□□□□ -0.38
CYCSP17-201ENST00000407870 SCRIBQ14160 1630 aa12.56□□□□□ -0.4
CYCSP17-201ENST00000407870 PABPN1Q86U42 306 aaKnown RBP eCLIP12.48□□□□□ -0.41
CYCSP17-201ENST00000407870 UNC13AQ9UPW8 1703 aa12.36□□□□□ -0.43
CYCSP17-201ENST00000407870 BICRAQ9NZM4 1560 aa12.29□□□□□ -0.44
CYCSP17-201ENST00000407870 SENP3Q9H4L4 574 aaPredicted RBP12.18□□□□□ -0.46
CYCSP17-201ENST00000407870 SUPT5HO00267 1087 aaKnown RBP12.15□□□□□ -0.46
CYCSP17-201ENST00000407870 CECR2Q9BXF3 1484 aa12.12□□□□□ -0.47
CYCSP17-201ENST00000407870 BAZ1AQ9NRL2 1556 aaPredicted RBP12.06□□□□□ -0.48
CYCSP17-201ENST00000407870 MROH2BQ7Z745 1585 aa12.01□□□□□ -0.49
CYCSP17-201ENST00000407870 RSF1Q96T23 1441 aaPredicted RBP12.01□□□□□ -0.49
CYCSP17-201ENST00000407870 EIF4G1Q04637 1599 aaKnown RBP12□□□□□ -0.49
CYCSP17-201ENST00000407870 SMARCA4P51532 1647 aa11.99□□□□□ -0.49
CYCSP17-201ENST00000407870 PHF23Q9BUL5 403 aaPredicted RBP11.98□□□□□ -0.49
CYCSP17-201ENST00000407870 WIZO95785 1651 aa11.9□□□□□ -0.5
CYCSP17-201ENST00000407870 SMARCA2P51531 1590 aa11.89□□□□□ -0.51
CYCSP17-201ENST00000407870 CC2D2AQ9P2K1 1620 aa11.89□□□□□ -0.51
CYCSP17-201ENST00000407870 ATAD2BQ9ULI0 1458 aa11.89□□□□□ -0.51
CYCSP17-201ENST00000407870 BAZ1BQ9UIG0 1483 aaKnown RBP11.85□□□□□ -0.51
CYCSP17-201ENST00000407870 DNAJC5BQ9UF47 199 aa11.84□□□□□ -0.51
CYCSP17-201ENST00000407870 NCAPD3P42695 1498 aa11.83□□□□□ -0.52
CYCSP17-201ENST00000407870 PEG3Q9GZU2 1588 aa11.81□□□□□ -0.52
CYCSP17-201ENST00000407870 TOP2AP11388 1531 aaKnown RBP11.77□□□□□ -0.52
CYCSP17-201ENST00000407870 HMGXB3Q12766 1538 aa11.75□□□□□ -0.53
CYCSP17-201ENST00000407870 CCDC88BA6NC98 1476 aa11.69□□□□□ -0.54
CYCSP17-201ENST00000407870 CADPSQ9ULU8 1353 aa11.56□□□□□ -0.56
CYCSP17-201ENST00000407870 CFTRP13569 1480 aa11.5□□□□□ -0.57
CYCSP17-201ENST00000407870 NESP48681 1621 aa11.48□□□□□ -0.57
CYCSP17-201ENST00000407870 PDS5BQ9NTI5 1447 aa11.46□□□□□ -0.57
CYCSP17-201ENST00000407870 LAMC3Q9Y6N6 1575 aa11.45□□□□□ -0.58
CYCSP17-201ENST00000407870 TRIM41Q8WV44 630 aa11.45□□□□□ -0.58
CYCSP17-201ENST00000407870 ERCC6Q03468 1493 aa11.41□□□□□ -0.58
CYCSP17-201ENST00000407870 FANCD2Q9BXW9 1451 aa11.41□□□□□ -0.58
CYCSP17-201ENST00000407870 CEP164Q9UPV0 1460 aa11.37□□□□□ -0.59
CYCSP17-201ENST00000407870 WRNQ14191 1432 aaPredicted RBP eCLIP11.35□□□□□ -0.59
CYCSP17-201ENST00000407870 ABCC8Q09428 1581 aa11.34□□□□□ -0.59
CYCSP17-201ENST00000407870 PRDM2Q13029 1718 aa11.33□□□□□ -0.6
CYCSP17-201ENST00000407870 FOXD1Q16676 465 aa11.33□□□□□ -0.6
CYCSP17-201ENST00000407870 KIF21AQ7Z4S6 1674 aa11.28□□□□□ -0.6
CYCSP17-201ENST00000407870 MRC2Q9UBG0 1479 aa11.27□□□□□ -0.6
CYCSP17-201ENST00000407870 FAM9AQ8IZU1 332 aaPredicted RBP11.24□□□□□ -0.61
CYCSP17-201ENST00000407870 CUX1P39880 1505 aa11.24□□□□□ -0.61
CYCSP17-201ENST00000407870 URB2Q14146 1524 aaKnown RBP11.23□□□□□ -0.61
CYCSP17-201ENST00000407870 TOPBP1Q92547 1522 aa11.23□□□□□ -0.61
CYCSP17-201ENST00000407870 SYNJ1O43426 1573 aa11.23□□□□□ -0.61
CYCSP17-201ENST00000407870 DNMBPQ6XZF7 1577 aa11.23□□□□□ -0.61
CYCSP17-201ENST00000407870 TOP2BQ02880 1626 aa11.21□□□□□ -0.61
CYCSP17-201ENST00000407870 SOGA1O94964 1423 aa11.2□□□□□ -0.62
CYCSP17-201ENST00000407870 FGD5Q6ZNL6 1462 aa11.19□□□□□ -0.62
CYCSP17-201ENST00000407870 BIVM-ERCC5R4GMW8 1640 aa11.17□□□□□ -0.62
CYCSP17-201ENST00000407870 WDR62O43379 1518 aa11.16□□□□□ -0.62
CYCSP17-201ENST00000407870 POLA1P09884 1462 aaPredicted RBP11.15□□□□□ -0.62
CYCSP17-201ENST00000407870 RAD54L2Q9Y4B4 1467 aa11.15□□□□□ -0.62
CYCSP17-201ENST00000407870 THOC2Q8NI27 1593 aaKnown RBP11.14□□□□□ -0.63
CYCSP17-201ENST00000407870 CSRNP3Q8WYN3 585 aa11.12□□□□□ -0.63
CYCSP17-201ENST00000407870 EHMT2Q96KQ7 1210 aa11.12□□□□□ -0.63
CYCSP17-201ENST00000407870 CUX2O14529 1486 aa11.12□□□□□ -0.63
CYCSP17-201ENST00000407870 IFT140Q96RY7 1462 aa11.12□□□□□ -0.63
CYCSP17-201ENST00000407870 KIF27Q86VH2 1401 aa11.11□□□□□ -0.63
CYCSP17-201ENST00000407870 TDRD9Q8NDG6 1382 aaKnown RBP11.11□□□□□ -0.63
CYCSP17-201ENST00000407870 EEA1Q15075 1411 aa11.09□□□□□ -0.63
CYCSP17-201ENST00000407870 ABCA10Q8WWZ4 1543 aa11.07□□□□□ -0.64
CYCSP17-201ENST00000407870 RUSC2Q8N2Y8 1516 aa11.06□□□□□ -0.64
CYCSP17-201ENST00000407870 AQRO60306 1485 aaKnown RBP eCLIP11.05□□□□□ -0.64
CYCSP17-201ENST00000407870 GAPVD1Q14C86 1478 aa11.04□□□□□ -0.64
CYCSP17-201ENST00000407870 LOC105371045A0A1W2PR82 267 aa11.02□□□□□ -0.65
CYCSP17-201ENST00000407870 UBTFP17480 764 aaKnown RBP11.02□□□□□ -0.65
CYCSP17-201ENST00000407870 FBLN2P98095 1184 aa11.02□□□□□ -0.65
CYCSP17-201ENST00000407870 ZNF608Q9ULD9 1512 aaPredicted RBP11.02□□□□□ -0.65
CYCSP17-201ENST00000407870 IGF1RP08069 1367 aa11.02□□□□□ -0.65
CYCSP17-201ENST00000407870 TARBP1Q13395 1621 aaKnown RBP11.02□□□□□ -0.65
CYCSP17-201ENST00000407870 GRIN2BQ13224 1484 aa11□□□□□ -0.65
CYCSP17-201ENST00000407870 CHMP7Q8WUX9 453 aaPredicted RBP10.99□□□□□ -0.65
CYCSP17-201ENST00000407870 CARMIL1Q5VZK9 1371 aa10.99□□□□□ -0.65
CYCSP17-201ENST00000407870 WDR97A6NE52 1622 aa10.95□□□□□ -0.66
CYCSP17-201ENST00000407870 ABCA5Q8WWZ7 1642 aa10.95□□□□□ -0.66
CYCSP17-201ENST00000407870 EIF4G3O43432 1585 aaKnown RBP10.94□□□□□ -0.66
CYCSP17-201ENST00000407870 ERICH3Q5RHP9 1530 aa10.94□□□□□ -0.66
CYCSP17-201ENST00000407870 RANGAP1P46060 587 aaPredicted RBP10.94□□□□□ -0.66
CYCSP17-201ENST00000407870 RAPGEF2Q9Y4G8 1499 aa10.93□□□□□ -0.66
CYCSP17-201ENST00000407870 FHAD1B1AJZ9 1412 aa10.92□□□□□ -0.66
CYCSP17-201ENST00000407870 GOLGA3Q08378 1498 aa10.92□□□□□ -0.66
CYCSP17-201ENST00000407870 SNAPC4Q5SXM2 1469 aa10.92□□□□□ -0.66
CYCSP17-201ENST00000407870 PBRM1Q86U86 1689 aa10.9□□□□□ -0.66
CYCSP17-201ENST00000407870 MAGI1Q96QZ7 1491 aaPredicted RBP10.9□□□□□ -0.66
CYCSP17-201ENST00000407870 PRXQ9BXM0 1461 aa10.9□□□□□ -0.66
CYCSP17-201ENST00000407870 CUL7Q14999 1698 aa10.89□□□□□ -0.67
CYCSP17-201ENST00000407870 KIF21BO75037 1637 aa10.87□□□□□ -0.67
CYCSP17-201ENST00000407870 SYNJ2O15056 1496 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms