RNA–Protein interactions for RNA: ENST00000407817.3

TCN2-203, Transcript of transcobalamin 2, humanhuman

TSL 1 (best) BASIC

Gene TCN2, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN2-203ENST00000407817 NISCHQ9Y2I1 1504 aa27.29■■□□□ 1.96
TCN2-203ENST00000407817 CCDC180Q9P1Z9 1646 aa23.99■■□□□ 1.43
TCN2-203ENST00000407817 ZCCHC6Q5VYS8 1495 aaKnown RBP22.89■■□□□ 1.25
TCN2-203ENST00000407817 ABCC9O60706 1549 aa22.81■■□□□ 1.24
TCN2-203ENST00000407817 DCAF1Q9Y4B6 1507 aa22.59■■□□□ 1.21
TCN2-203ENST00000407817 DCAF8L2P0C7V8 631 aa22.43■■□□□ 1.18
TCN2-203ENST00000407817 MYO15BQ96JP2 1530 aa22.42■■□□□ 1.18
TCN2-203ENST00000407817 NACADO15069 1562 aa22.34■■□□□ 1.17
TCN2-203ENST00000407817 RB1CC1Q8TDY2 1594 aa22.2■■□□□ 1.14
TCN2-203ENST00000407817 SHROOM4Q9ULL8 1493 aa22.07■■□□□ 1.12
TCN2-203ENST00000407817 SCRIBQ14160 1630 aa21.96■■□□□ 1.11
TCN2-203ENST00000407817 UNC13AQ9UPW8 1703 aa21.89■■□□□ 1.1
TCN2-203ENST00000407817 BICRAQ9NZM4 1560 aa21.62■■□□□ 1.05
TCN2-203ENST00000407817 PABPN1Q86U42 306 aaKnown RBP eCLIP21.41■■□□□ 1.02
TCN2-203ENST00000407817 SUPT5HO00267 1087 aaKnown RBP21.28■■□□□ 1
TCN2-203ENST00000407817 CECR2Q9BXF3 1484 aa21.23■□□□□ 0.99
TCN2-203ENST00000407817 MROH2BQ7Z745 1585 aa21.08■□□□□ 0.97
TCN2-203ENST00000407817 BAZ1AQ9NRL2 1556 aaPredicted RBP21.08■□□□□ 0.96
TCN2-203ENST00000407817 SMARCA4P51532 1647 aa21.06■□□□□ 0.96
TCN2-203ENST00000407817 RSF1Q96T23 1441 aaPredicted RBP21.05■□□□□ 0.96
TCN2-203ENST00000407817 EIF4G1Q04637 1599 aaKnown RBP20.93■□□□□ 0.94
TCN2-203ENST00000407817 WIZO95785 1651 aa20.92■□□□□ 0.94
TCN2-203ENST00000407817 PEG3Q9GZU2 1588 aa20.84■□□□□ 0.93
TCN2-203ENST00000407817 ATAD2BQ9ULI0 1458 aa20.74■□□□□ 0.91
TCN2-203ENST00000407817 SMARCA2P51531 1590 aa20.72■□□□□ 0.91
TCN2-203ENST00000407817 CC2D2AQ9P2K1 1620 aa20.7■□□□□ 0.9
TCN2-203ENST00000407817 TOP2AP11388 1531 aaKnown RBP20.67■□□□□ 0.9
TCN2-203ENST00000407817 NCAPD3P42695 1498 aa20.61■□□□□ 0.89
TCN2-203ENST00000407817 HMGXB3Q12766 1538 aa20.59■□□□□ 0.89
TCN2-203ENST00000407817 BAZ1BQ9UIG0 1483 aaKnown RBP20.58■□□□□ 0.88
TCN2-203ENST00000407817 CCDC88BA6NC98 1476 aa20.43■□□□□ 0.86
TCN2-203ENST00000407817 DNAJC5BQ9UF47 199 aa20.38■□□□□ 0.85
TCN2-203ENST00000407817 CHIC1Q5VXU3 224 aa20.36■□□□□ 0.85
TCN2-203ENST00000407817 PRDM2Q13029 1718 aa20.08■□□□□ 0.81
TCN2-203ENST00000407817 CFTRP13569 1480 aa20.08■□□□□ 0.8
TCN2-203ENST00000407817 CADPSQ9ULU8 1353 aa20.03■□□□□ 0.8
TCN2-203ENST00000407817 TRIM41Q8WV44 630 aa20■□□□□ 0.79
TCN2-203ENST00000407817 NESP48681 1621 aa19.98■□□□□ 0.79
TCN2-203ENST00000407817 LAMC3Q9Y6N6 1575 aa19.97■□□□□ 0.79
TCN2-203ENST00000407817 ABCC8Q09428 1581 aa19.93■□□□□ 0.78
TCN2-203ENST00000407817 FANCD2Q9BXW9 1451 aa19.81■□□□□ 0.76
TCN2-203ENST00000407817 KIF21AQ7Z4S6 1674 aa19.8■□□□□ 0.76
TCN2-203ENST00000407817 SYNJ1O43426 1573 aa19.79■□□□□ 0.76
TCN2-203ENST00000407817 WRNQ14191 1432 aaPredicted RBP eCLIP19.79■□□□□ 0.76
TCN2-203ENST00000407817 PDS5BQ9NTI5 1447 aa19.74■□□□□ 0.75
TCN2-203ENST00000407817 BIVM-ERCC5R4GMW8 1640 aa19.74■□□□□ 0.75
TCN2-203ENST00000407817 CUX1P39880 1505 aa19.73■□□□□ 0.75
TCN2-203ENST00000407817 TOP2BQ02880 1626 aa19.72■□□□□ 0.75
TCN2-203ENST00000407817 CEP164Q9UPV0 1460 aa19.71■□□□□ 0.75
TCN2-203ENST00000407817 FAM9AQ8IZU1 332 aaPredicted RBP19.65■□□□□ 0.74
TCN2-203ENST00000407817 DNMBPQ6XZF7 1577 aa19.64■□□□□ 0.73
TCN2-203ENST00000407817 URB2Q14146 1524 aaKnown RBP19.63■□□□□ 0.73
TCN2-203ENST00000407817 TOPBP1Q92547 1522 aa19.6■□□□□ 0.73
TCN2-203ENST00000407817 LOC105371045A0A1W2PR82 267 aa19.6■□□□□ 0.73
TCN2-203ENST00000407817 MRC2Q9UBG0 1479 aa19.56■□□□□ 0.72
TCN2-203ENST00000407817 THOC2Q8NI27 1593 aaKnown RBP19.55■□□□□ 0.72
TCN2-203ENST00000407817 ERCC6Q03468 1493 aa19.53■□□□□ 0.72
TCN2-203ENST00000407817 FGD5Q6ZNL6 1462 aa19.53■□□□□ 0.72
TCN2-203ENST00000407817 WDR62O43379 1518 aa19.51■□□□□ 0.71
TCN2-203ENST00000407817 POLA1P09884 1462 aaPredicted RBP19.48■□□□□ 0.71
TCN2-203ENST00000407817 SOGA1O94964 1423 aa19.47■□□□□ 0.71
TCN2-203ENST00000407817 EEA1Q15075 1411 aa19.46■□□□□ 0.71
TCN2-203ENST00000407817 RUSC2Q8N2Y8 1516 aa19.44■□□□□ 0.7
TCN2-203ENST00000407817 WDR97A6NE52 1622 aa19.42■□□□□ 0.7
TCN2-203ENST00000407817 RAD54L2Q9Y4B4 1467 aa19.4■□□□□ 0.7
TCN2-203ENST00000407817 EHMT2Q96KQ7 1210 aa19.39■□□□□ 0.7
TCN2-203ENST00000407817 TARBP1Q13395 1621 aaKnown RBP19.38■□□□□ 0.69
TCN2-203ENST00000407817 CUX2O14529 1486 aa19.37■□□□□ 0.69
TCN2-203ENST00000407817 ABCA10Q8WWZ4 1543 aa19.36■□□□□ 0.69
TCN2-203ENST00000407817 CSRNP3Q8WYN3 585 aa19.34■□□□□ 0.69
TCN2-203ENST00000407817 KIF27Q86VH2 1401 aa19.29■□□□□ 0.68
TCN2-203ENST00000407817 ABCA5Q8WWZ7 1642 aa19.28■□□□□ 0.68
TCN2-203ENST00000407817 IFT140Q96RY7 1462 aa19.26■□□□□ 0.67
TCN2-203ENST00000407817 KIF21BO75037 1637 aa19.21■□□□□ 0.67
TCN2-203ENST00000407817 GOLGA3Q08378 1498 aa19.21■□□□□ 0.67
TCN2-203ENST00000407817 TDRD9Q8NDG6 1382 aaKnown RBP19.19■□□□□ 0.66
TCN2-203ENST00000407817 ZNF608Q9ULD9 1512 aaPredicted RBP19.19■□□□□ 0.66
TCN2-203ENST00000407817 PBRM1Q86U86 1689 aa19.18■□□□□ 0.66
TCN2-203ENST00000407817 IGF1RP08069 1367 aa19.17■□□□□ 0.66
TCN2-203ENST00000407817 GAPVD1Q14C86 1478 aa19.17■□□□□ 0.66
TCN2-203ENST00000407817 EIF4G3O43432 1585 aaKnown RBP19.16■□□□□ 0.66
TCN2-203ENST00000407817 PRXQ9BXM0 1461 aa19.15■□□□□ 0.66
TCN2-203ENST00000407817 UBTFP17480 764 aaKnown RBP19.15■□□□□ 0.66
TCN2-203ENST00000407817 AQRO60306 1485 aaKnown RBP eCLIP19.14■□□□□ 0.66
TCN2-203ENST00000407817 TNIKQ9UKE5 1360 aa19.14■□□□□ 0.65
TCN2-203ENST00000407817 ERICH3Q5RHP9 1530 aa19.13■□□□□ 0.65
TCN2-203ENST00000407817 CUL7Q14999 1698 aa19.1■□□□□ 0.65
TCN2-203ENST00000407817 RAPGEF2Q9Y4G8 1499 aa19.09■□□□□ 0.65
TCN2-203ENST00000407817 CEP162Q5TB80 1403 aa19.07■□□□□ 0.64
TCN2-203ENST00000407817 GRIN2BQ13224 1484 aa19.06■□□□□ 0.64
TCN2-203ENST00000407817 CARMIL1Q5VZK9 1371 aa19.04■□□□□ 0.64
TCN2-203ENST00000407817 ADAMTS12P58397 1594 aa19.03■□□□□ 0.64
TCN2-203ENST00000407817 SNAPC4Q5SXM2 1469 aa18.97■□□□□ 0.63
TCN2-203ENST00000407817 FHAD1B1AJZ9 1412 aa18.95■□□□□ 0.62
TCN2-203ENST00000407817 MAGI1Q96QZ7 1491 aaPredicted RBP18.94■□□□□ 0.62
TCN2-203ENST00000407817 CLIP1P30622 1438 aa18.9■□□□□ 0.62
TCN2-203ENST00000407817 CTTNBP2Q8WZ74 1663 aa18.89■□□□□ 0.61
TCN2-203ENST00000407817 SYNJ2O15056 1496 aa18.87■□□□□ 0.61
TCN2-203ENST00000407817 GRIN2AQ12879 1464 aa18.84■□□□□ 0.61
TCN2-203ENST00000407817 RANGAP1P46060 587 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms