RNA–Protein interactions for RNA: ENST00000405497.1

PKMP3-201, Transcript of pyruvate kinase M1/2 pseudogene 3, humanhuman

BASIC

Gene PKMP3, Length 715 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKMP3-201ENST00000405497 NISCHQ9Y2I1 1504 aa18.83■□□□□ 0.6
PKMP3-201ENST00000405497 CCDC180Q9P1Z9 1646 aa16.59■□□□□ 0.25
PKMP3-201ENST00000405497 ABCC9O60706 1549 aa16.38■□□□□ 0.21
PKMP3-201ENST00000405497 DCAF8L2P0C7V8 631 aa15.95■□□□□ 0.14
PKMP3-201ENST00000405497 NACADO15069 1562 aa15.67■□□□□ 0.1
PKMP3-201ENST00000405497 RB1CC1Q8TDY2 1594 aa15.66■□□□□ 0.1
PKMP3-201ENST00000405497 ZCCHC6Q5VYS8 1495 aaKnown RBP15.64■□□□□ 0.09
PKMP3-201ENST00000405497 MYO15BQ96JP2 1530 aa15.56■□□□□ 0.08
PKMP3-201ENST00000405497 DCAF1Q9Y4B6 1507 aa15.52■□□□□ 0.07
PKMP3-201ENST00000405497 PABPN1Q86U42 306 aaKnown RBP eCLIP15.43■□□□□ 0.06
PKMP3-201ENST00000405497 UNC13AQ9UPW8 1703 aa15.27■□□□□ 0.04
PKMP3-201ENST00000405497 SCRIBQ14160 1630 aa15.22■□□□□ 0.03
PKMP3-201ENST00000405497 BICRAQ9NZM4 1560 aa15.22■□□□□ 0.03
PKMP3-201ENST00000405497 DNAJC5BQ9UF47 199 aa15.13■□□□□ 0.01
PKMP3-201ENST00000405497 SHROOM4Q9ULL8 1493 aa15.01□□□□□ -0.01
PKMP3-201ENST00000405497 EIF4G1Q04637 1599 aaKnown RBP14.8□□□□□ -0.04
PKMP3-201ENST00000405497 CC2D2AQ9P2K1 1620 aa14.75□□□□□ -0.05
PKMP3-201ENST00000405497 CECR2Q9BXF3 1484 aa14.73□□□□□ -0.05
PKMP3-201ENST00000405497 SMARCA4P51532 1647 aa14.55□□□□□ -0.08
PKMP3-201ENST00000405497 BAZ1AQ9NRL2 1556 aaPredicted RBP14.54□□□□□ -0.08
PKMP3-201ENST00000405497 MROH2BQ7Z745 1585 aa14.53□□□□□ -0.08
PKMP3-201ENST00000405497 NCAPD3P42695 1498 aa14.53□□□□□ -0.08
PKMP3-201ENST00000405497 ATAD2BQ9ULI0 1458 aa14.53□□□□□ -0.08
PKMP3-201ENST00000405497 SMARCA2P51531 1590 aa14.46□□□□□ -0.09
PKMP3-201ENST00000405497 RSF1Q96T23 1441 aaPredicted RBP14.41□□□□□ -0.1
PKMP3-201ENST00000405497 PEG3Q9GZU2 1588 aa14.39□□□□□ -0.11
PKMP3-201ENST00000405497 BAZ1BQ9UIG0 1483 aaKnown RBP14.38□□□□□ -0.11
PKMP3-201ENST00000405497 HMGXB3Q12766 1538 aa14.36□□□□□ -0.11
PKMP3-201ENST00000405497 WIZO95785 1651 aa14.35□□□□□ -0.11
PKMP3-201ENST00000405497 SUPT5HO00267 1087 aaKnown RBP14.22□□□□□ -0.13
PKMP3-201ENST00000405497 NESP48681 1621 aa14.18□□□□□ -0.14
PKMP3-201ENST00000405497 TOP2AP11388 1531 aaKnown RBP14.15□□□□□ -0.14
PKMP3-201ENST00000405497 CADPSQ9ULU8 1353 aa14.14□□□□□ -0.15
PKMP3-201ENST00000405497 CCDC88BA6NC98 1476 aa14.09□□□□□ -0.15
PKMP3-201ENST00000405497 ERCC6Q03468 1493 aa14.08□□□□□ -0.16
PKMP3-201ENST00000405497 LAMC3Q9Y6N6 1575 aa14.05□□□□□ -0.16
PKMP3-201ENST00000405497 PDS5BQ9NTI5 1447 aa14.04□□□□□ -0.16
PKMP3-201ENST00000405497 CFTRP13569 1480 aa14.01□□□□□ -0.17
PKMP3-201ENST00000405497 AEBP2Q6ZN18 517 aaPredicted RBP13.95□□□□□ -0.18
PKMP3-201ENST00000405497 FANCD2Q9BXW9 1451 aa13.93□□□□□ -0.18
PKMP3-201ENST00000405497 KIF21AQ7Z4S6 1674 aa13.91□□□□□ -0.18
PKMP3-201ENST00000405497 CEP164Q9UPV0 1460 aa13.87□□□□□ -0.19
PKMP3-201ENST00000405497 CUX2O14529 1486 aa13.87□□□□□ -0.19
PKMP3-201ENST00000405497 MRC2Q9UBG0 1479 aa13.85□□□□□ -0.19
PKMP3-201ENST00000405497 THOC2Q8NI27 1593 aaKnown RBP13.83□□□□□ -0.2
PKMP3-201ENST00000405497 URB2Q14146 1524 aaKnown RBP13.78□□□□□ -0.2
PKMP3-201ENST00000405497 WDR62O43379 1518 aa13.76□□□□□ -0.21
PKMP3-201ENST00000405497 PRDM2Q13029 1718 aa13.75□□□□□ -0.21
PKMP3-201ENST00000405497 TOPBP1Q92547 1522 aa13.7□□□□□ -0.22
PKMP3-201ENST00000405497 ABCC8Q09428 1581 aa13.7□□□□□ -0.22
PKMP3-201ENST00000405497 CHIC1Q5VXU3 224 aa13.69□□□□□ -0.22
PKMP3-201ENST00000405497 DNMBPQ6XZF7 1577 aa13.64□□□□□ -0.23
PKMP3-201ENST00000405497 CUX1P39880 1505 aa13.61□□□□□ -0.23
PKMP3-201ENST00000405497 SOGA1O94964 1423 aa13.61□□□□□ -0.23
PKMP3-201ENST00000405497 IFT140Q96RY7 1462 aa13.6□□□□□ -0.23
PKMP3-201ENST00000405497 POLA1P09884 1462 aaPredicted RBP13.59□□□□□ -0.23
PKMP3-201ENST00000405497 RAD54L2Q9Y4B4 1467 aa13.59□□□□□ -0.23
PKMP3-201ENST00000405497 DNAJC5Q9H3Z4 198 aa13.57□□□□□ -0.24
PKMP3-201ENST00000405497 ZNF608Q9ULD9 1512 aaPredicted RBP13.57□□□□□ -0.24
PKMP3-201ENST00000405497 WRNQ14191 1432 aaPredicted RBP eCLIP13.56□□□□□ -0.24
PKMP3-201ENST00000405497 FGD5Q6ZNL6 1462 aa13.55□□□□□ -0.24
PKMP3-201ENST00000405497 TDRD9Q8NDG6 1382 aaKnown RBP13.55□□□□□ -0.24
PKMP3-201ENST00000405497 AQRO60306 1485 aaKnown RBP eCLIP13.55□□□□□ -0.24
PKMP3-201ENST00000405497 TARBP1Q13395 1621 aaKnown RBP13.51□□□□□ -0.25
PKMP3-201ENST00000405497 SYNJ1O43426 1573 aa13.47□□□□□ -0.25
PKMP3-201ENST00000405497 OSCARQ8IYS5 282 aa13.47□□□□□ -0.25
PKMP3-201ENST00000405497 TOP2BQ02880 1626 aa13.46□□□□□ -0.26
PKMP3-201ENST00000405497 FBLN2P98095 1184 aa13.45□□□□□ -0.26
PKMP3-201ENST00000405497 BIVM-ERCC5R4GMW8 1640 aa13.42□□□□□ -0.26
PKMP3-201ENST00000405497 ABCA10Q8WWZ4 1543 aa13.42□□□□□ -0.26
PKMP3-201ENST00000405497 GAPVD1Q14C86 1478 aa13.41□□□□□ -0.26
PKMP3-201ENST00000405497 EIF4G3O43432 1585 aaKnown RBP13.41□□□□□ -0.26
PKMP3-201ENST00000405497 CHMP7Q8WUX9 453 aaPredicted RBP13.4□□□□□ -0.26
PKMP3-201ENST00000405497 TRIM41Q8WV44 630 aa13.4□□□□□ -0.26
PKMP3-201ENST00000405497 GRIN2BQ13224 1484 aa13.37□□□□□ -0.27
PKMP3-201ENST00000405497 SNAPC4Q5SXM2 1469 aa13.34□□□□□ -0.27
PKMP3-201ENST00000405497 WDR97A6NE52 1622 aa13.33□□□□□ -0.28
PKMP3-201ENST00000405497 MAGI1Q96QZ7 1491 aaPredicted RBP13.3□□□□□ -0.28
PKMP3-201ENST00000405497 IGF1RP08069 1367 aa13.3□□□□□ -0.28
PKMP3-201ENST00000405497 ABCA5Q8WWZ7 1642 aa13.29□□□□□ -0.28
PKMP3-201ENST00000405497 KIF27Q86VH2 1401 aa13.29□□□□□ -0.28
PKMP3-201ENST00000405497 SYNJ2O15056 1496 aa13.27□□□□□ -0.29
PKMP3-201ENST00000405497 PBRM1Q86U86 1689 aa13.24□□□□□ -0.29
PKMP3-201ENST00000405497 FHAD1B1AJZ9 1412 aa13.24□□□□□ -0.29
PKMP3-201ENST00000405497 CHD1O14646 1710 aa13.24□□□□□ -0.29
PKMP3-201ENST00000405497 ERICH3Q5RHP9 1530 aa13.23□□□□□ -0.29
PKMP3-201ENST00000405497 RUSC2Q8N2Y8 1516 aa13.23□□□□□ -0.29
PKMP3-201ENST00000405497 CARMIL1Q5VZK9 1371 aa13.2□□□□□ -0.3
PKMP3-201ENST00000405497 GRIN2AQ12879 1464 aa13.18□□□□□ -0.3
PKMP3-201ENST00000405497 FAM9AQ8IZU1 332 aaPredicted RBP13.17□□□□□ -0.3
PKMP3-201ENST00000405497 ADAMTS12P58397 1594 aa13.16□□□□□ -0.3
PKMP3-201ENST00000405497 CYB5RLQ6IPT4 315 aa13.16□□□□□ -0.3
PKMP3-201ENST00000405497 CSRNP3Q8WYN3 585 aa13.15□□□□□ -0.3
PKMP3-201ENST00000405497 JPH4Q96JJ6 628 aa13.15□□□□□ -0.3
PKMP3-201ENST00000405497 NUP160Q12769 1436 aa13.13□□□□□ -0.31
PKMP3-201ENST00000405497 CLASP1Q7Z460 1538 aa13.11□□□□□ -0.31
PKMP3-201ENST00000405497 ARHGEF11O15085 1522 aa13.1□□□□□ -0.31
PKMP3-201ENST00000405497 CEP170Q5SW79 1584 aa13.1□□□□□ -0.31
PKMP3-201ENST00000405497 RIMBP3CA6NJZ7 1639 aa13.09□□□□□ -0.31
PKMP3-201ENST00000405497 RIMBP3BA6NNM3 1639 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms