RNA–Protein interactions for RNA: ENST00000405496.5

SERPING1-206, Transcript of serpin family G member 1, humanhuman

TSL 4

Gene SERPING1, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERPING1-206ENST00000405496 NISCHQ9Y2I1 1504 aa30.98■■■□□ 2.55
SERPING1-206ENST00000405496 AEBP2Q6ZN18 517 aaPredicted RBP28.84■■■□□ 2.21
SERPING1-206ENST00000405496 CCDC180Q9P1Z9 1646 aa27.54■■■□□ 2
SERPING1-206ENST00000405496 CHIC1Q5VXU3 224 aa27.3■■□□□ 1.96
SERPING1-206ENST00000405496 ABCC9O60706 1549 aa26.6■■□□□ 1.85
SERPING1-206ENST00000405496 ZCCHC6Q5VYS8 1495 aaKnown RBP25.88■■□□□ 1.73
SERPING1-206ENST00000405496 NACADO15069 1562 aa25.82■■□□□ 1.72
SERPING1-206ENST00000405496 MYO15BQ96JP2 1530 aa25.78■■□□□ 1.72
SERPING1-206ENST00000405496 RB1CC1Q8TDY2 1594 aa25.78■■□□□ 1.72
SERPING1-206ENST00000405496 DCAF1Q9Y4B6 1507 aa25.73■■□□□ 1.71
SERPING1-206ENST00000405496 DCAF8L2P0C7V8 631 aa25.63■■□□□ 1.69
SERPING1-206ENST00000405496 UNC13AQ9UPW8 1703 aa25.15■■□□□ 1.62
SERPING1-206ENST00000405496 SCRIBQ14160 1630 aa25.03■■□□□ 1.6
SERPING1-206ENST00000405496 BICRAQ9NZM4 1560 aa24.94■■□□□ 1.58
SERPING1-206ENST00000405496 SHROOM4Q9ULL8 1493 aa24.86■■□□□ 1.57
SERPING1-206ENST00000405496 PABPN1Q86U42 306 aaKnown RBP eCLIP24.82■■□□□ 1.56
SERPING1-206ENST00000405496 SENP3Q9H4L4 574 aaPredicted RBP24.68■■□□□ 1.54
SERPING1-206ENST00000405496 PHF23Q9BUL5 403 aaPredicted RBP24.34■■□□□ 1.49
SERPING1-206ENST00000405496 EIF4G1Q04637 1599 aaKnown RBP24.29■■□□□ 1.48
SERPING1-206ENST00000405496 DNAJC5BQ9UF47 199 aa24.14■■□□□ 1.45
SERPING1-206ENST00000405496 CC2D2AQ9P2K1 1620 aa24.13■■□□□ 1.45
SERPING1-206ENST00000405496 BAZ1AQ9NRL2 1556 aaPredicted RBP24.04■■□□□ 1.44
SERPING1-206ENST00000405496 CECR2Q9BXF3 1484 aa24.04■■□□□ 1.44
SERPING1-206ENST00000405496 SMARCA4P51532 1647 aa24.01■■□□□ 1.43
SERPING1-206ENST00000405496 SMARCA2P51531 1590 aa23.85■■□□□ 1.41
SERPING1-206ENST00000405496 MROH2BQ7Z745 1585 aa23.83■■□□□ 1.41
SERPING1-206ENST00000405496 PEG3Q9GZU2 1588 aa23.82■■□□□ 1.4
SERPING1-206ENST00000405496 ATAD2BQ9ULI0 1458 aa23.81■■□□□ 1.4
SERPING1-206ENST00000405496 NCAPD3P42695 1498 aa23.79■■□□□ 1.4
SERPING1-206ENST00000405496 HMGXB3Q12766 1538 aa23.74■■□□□ 1.39
SERPING1-206ENST00000405496 BAZ1BQ9UIG0 1483 aaKnown RBP23.64■■□□□ 1.38
SERPING1-206ENST00000405496 RSF1Q96T23 1441 aaPredicted RBP23.64■■□□□ 1.37
SERPING1-206ENST00000405496 WIZO95785 1651 aa23.58■■□□□ 1.37
SERPING1-206ENST00000405496 TOP2AP11388 1531 aaKnown RBP23.43■■□□□ 1.34
SERPING1-206ENST00000405496 LAMC3Q9Y6N6 1575 aa23.16■■□□□ 1.3
SERPING1-206ENST00000405496 SUPT5HO00267 1087 aaKnown RBP23.09■■□□□ 1.29
SERPING1-206ENST00000405496 CADPSQ9ULU8 1353 aa23.08■■□□□ 1.29
SERPING1-206ENST00000405496 CCDC88BA6NC98 1476 aa23.07■■□□□ 1.28
SERPING1-206ENST00000405496 NESP48681 1621 aa23.06■■□□□ 1.28
SERPING1-206ENST00000405496 CFTRP13569 1480 aa23.01■■□□□ 1.27
SERPING1-206ENST00000405496 FOXD1Q16676 465 aa22.99■■□□□ 1.27
SERPING1-206ENST00000405496 PDS5BQ9NTI5 1447 aa22.98■■□□□ 1.27
SERPING1-206ENST00000405496 ERCC6Q03468 1493 aa22.97■■□□□ 1.27
SERPING1-206ENST00000405496 PRDM2Q13029 1718 aa22.91■■□□□ 1.26
SERPING1-206ENST00000405496 KIF21AQ7Z4S6 1674 aa22.85■■□□□ 1.25
SERPING1-206ENST00000405496 FANCD2Q9BXW9 1451 aa22.82■■□□□ 1.24
SERPING1-206ENST00000405496 CEP164Q9UPV0 1460 aa22.79■■□□□ 1.24
SERPING1-206ENST00000405496 THOC2Q8NI27 1593 aaKnown RBP22.77■■□□□ 1.24
SERPING1-206ENST00000405496 MRC2Q9UBG0 1479 aa22.73■■□□□ 1.23
SERPING1-206ENST00000405496 CUX2O14529 1486 aa22.72■■□□□ 1.23
SERPING1-206ENST00000405496 WDR62O43379 1518 aa22.67■■□□□ 1.22
SERPING1-206ENST00000405496 URB2Q14146 1524 aaKnown RBP22.56■■□□□ 1.2
SERPING1-206ENST00000405496 ABCC8Q09428 1581 aa22.55■■□□□ 1.2
SERPING1-206ENST00000405496 DNMBPQ6XZF7 1577 aa22.5■■□□□ 1.19
SERPING1-206ENST00000405496 TOPBP1Q92547 1522 aa22.48■■□□□ 1.19
SERPING1-206ENST00000405496 CUX1P39880 1505 aa22.36■■□□□ 1.17
SERPING1-206ENST00000405496 IFT140Q96RY7 1462 aa22.32■■□□□ 1.16
SERPING1-206ENST00000405496 WRNQ14191 1432 aaPredicted RBP eCLIP22.31■■□□□ 1.16
SERPING1-206ENST00000405496 POLA1P09884 1462 aaPredicted RBP22.3■■□□□ 1.16
SERPING1-206ENST00000405496 BIVM-ERCC5R4GMW8 1640 aa22.28■■□□□ 1.16
SERPING1-206ENST00000405496 TOP2BQ02880 1626 aa22.27■■□□□ 1.16
SERPING1-206ENST00000405496 FGD5Q6ZNL6 1462 aa22.27■■□□□ 1.16
SERPING1-206ENST00000405496 SYNJ1O43426 1573 aa22.23■■□□□ 1.15
SERPING1-206ENST00000405496 TARBP1Q13395 1621 aaKnown RBP22.22■■□□□ 1.15
SERPING1-206ENST00000405496 SOGA1O94964 1423 aa22.19■■□□□ 1.14
SERPING1-206ENST00000405496 WDR97A6NE52 1622 aa22.18■■□□□ 1.14
SERPING1-206ENST00000405496 RAD54L2Q9Y4B4 1467 aa22.14■■□□□ 1.13
SERPING1-206ENST00000405496 ZNF608Q9ULD9 1512 aaPredicted RBP22.12■■□□□ 1.13
SERPING1-206ENST00000405496 EIF4G3O43432 1585 aaKnown RBP22.11■■□□□ 1.13
SERPING1-206ENST00000405496 ABCA10Q8WWZ4 1543 aa22.1■■□□□ 1.13
SERPING1-206ENST00000405496 AQRO60306 1485 aaKnown RBP eCLIP22.01■■□□□ 1.11
SERPING1-206ENST00000405496 ABCA5Q8WWZ7 1642 aa22■■□□□ 1.11
SERPING1-206ENST00000405496 TDRD9Q8NDG6 1382 aaKnown RBP21.99■■□□□ 1.11
SERPING1-206ENST00000405496 GAPVD1Q14C86 1478 aa21.96■■□□□ 1.11
SERPING1-206ENST00000405496 GRIN2BQ13224 1484 aa21.96■■□□□ 1.11
SERPING1-206ENST00000405496 PBRM1Q86U86 1689 aa21.92■■□□□ 1.1
SERPING1-206ENST00000405496 MAGI1Q96QZ7 1491 aaPredicted RBP21.9■■□□□ 1.1
SERPING1-206ENST00000405496 SNAPC4Q5SXM2 1469 aa21.87■■□□□ 1.09
SERPING1-206ENST00000405496 TRIM41Q8WV44 630 aa21.86■■□□□ 1.09
SERPING1-206ENST00000405496 ERICH3Q5RHP9 1530 aa21.85■■□□□ 1.09
SERPING1-206ENST00000405496 KIF27Q86VH2 1401 aa21.85■■□□□ 1.09
SERPING1-206ENST00000405496 PLPPR3Q6T4P5 718 aa21.8■■□□□ 1.08
SERPING1-206ENST00000405496 SYNJ2O15056 1496 aa21.79■■□□□ 1.08
SERPING1-206ENST00000405496 ADAMTS12P58397 1594 aa21.78■■□□□ 1.08
SERPING1-206ENST00000405496 CHD1O14646 1710 aa21.77■■□□□ 1.08
SERPING1-206ENST00000405496 FHAD1B1AJZ9 1412 aa21.73■■□□□ 1.07
SERPING1-206ENST00000405496 CUL7Q14999 1698 aa21.72■■□□□ 1.07
SERPING1-206ENST00000405496 OSCARQ8IYS5 282 aa21.71■■□□□ 1.07
SERPING1-206ENST00000405496 CHMP7Q8WUX9 453 aaPredicted RBP21.69■■□□□ 1.06
SERPING1-206ENST00000405496 IGF1RP08069 1367 aa21.68■■□□□ 1.06
SERPING1-206ENST00000405496 FBLN2P98095 1184 aa21.67■■□□□ 1.06
SERPING1-206ENST00000405496 DNAJC5Q9H3Z4 198 aa21.67■■□□□ 1.06
SERPING1-206ENST00000405496 GRIN2AQ12879 1464 aa21.66■■□□□ 1.06
SERPING1-206ENST00000405496 EEA1Q15075 1411 aa21.62■■□□□ 1.05
SERPING1-206ENST00000405496 MSH5O43196 834 aa21.6■■□□□ 1.05
SERPING1-206ENST00000405496 RUSC2Q8N2Y8 1516 aa21.6■■□□□ 1.05
SERPING1-206ENST00000405496 NUP160Q12769 1436 aa21.57■■□□□ 1.04
SERPING1-206ENST00000405496 CLASP1Q7Z460 1538 aa21.57■■□□□ 1.04
SERPING1-206ENST00000405496 CARMIL1Q5VZK9 1371 aa21.57■■□□□ 1.04
SERPING1-206ENST00000405496 CEP170Q5SW79 1584 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms