RNA–Protein interactions for RNA: ENST00000405369.3

LINC01644-201, Transcript of long intergenic non-protein coding RNA 1644, humanhuman

TSL 1 (best) BASIC

Gene LINC01644, Length 984 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01644-201ENST00000405369 NISCHQ9Y2I1 1504 aa19.9■□□□□ 0.78
LINC01644-201ENST00000405369 CCDC180Q9P1Z9 1646 aa17.74■□□□□ 0.43
LINC01644-201ENST00000405369 ABCC9O60706 1549 aa17.13■□□□□ 0.33
LINC01644-201ENST00000405369 DNAJC5BQ9UF47 199 aa16.65■□□□□ 0.26
LINC01644-201ENST00000405369 NACADO15069 1562 aa16.61■□□□□ 0.25
LINC01644-201ENST00000405369 RB1CC1Q8TDY2 1594 aa16.61■□□□□ 0.25
LINC01644-201ENST00000405369 ZCCHC6Q5VYS8 1495 aaKnown RBP16.61■□□□□ 0.25
LINC01644-201ENST00000405369 DCAF8L2P0C7V8 631 aa16.54■□□□□ 0.24
LINC01644-201ENST00000405369 MYO15BQ96JP2 1530 aa16.54■□□□□ 0.24
LINC01644-201ENST00000405369 DCAF1Q9Y4B6 1507 aa16.5■□□□□ 0.23
LINC01644-201ENST00000405369 UNC13AQ9UPW8 1703 aa16.26■□□□□ 0.19
LINC01644-201ENST00000405369 SCRIBQ14160 1630 aa16.13■□□□□ 0.17
LINC01644-201ENST00000405369 BICRAQ9NZM4 1560 aa16.03■□□□□ 0.16
LINC01644-201ENST00000405369 PABPN1Q86U42 306 aaKnown RBP eCLIP15.98■□□□□ 0.15
LINC01644-201ENST00000405369 SHROOM4Q9ULL8 1493 aa15.97■□□□□ 0.15
LINC01644-201ENST00000405369 DNAJC5Q9H3Z4 198 aa15.65■□□□□ 0.1
LINC01644-201ENST00000405369 EIF4G1Q04637 1599 aaKnown RBP15.63■□□□□ 0.09
LINC01644-201ENST00000405369 CC2D2AQ9P2K1 1620 aa15.54■□□□□ 0.08
LINC01644-201ENST00000405369 BAZ1AQ9NRL2 1556 aaPredicted RBP15.46■□□□□ 0.07
LINC01644-201ENST00000405369 SMARCA4P51532 1647 aa15.45■□□□□ 0.06
LINC01644-201ENST00000405369 CECR2Q9BXF3 1484 aa15.43■□□□□ 0.06
LINC01644-201ENST00000405369 SMARCA2P51531 1590 aa15.35■□□□□ 0.05
LINC01644-201ENST00000405369 MROH2BQ7Z745 1585 aa15.31■□□□□ 0.04
LINC01644-201ENST00000405369 PEG3Q9GZU2 1588 aa15.29■□□□□ 0.04
LINC01644-201ENST00000405369 ATAD2BQ9ULI0 1458 aa15.29■□□□□ 0.04
LINC01644-201ENST00000405369 HMGXB3Q12766 1538 aa15.26■□□□□ 0.03
LINC01644-201ENST00000405369 NCAPD3P42695 1498 aa15.26■□□□□ 0.03
LINC01644-201ENST00000405369 BAZ1BQ9UIG0 1483 aaKnown RBP15.21■□□□□ 0.03
LINC01644-201ENST00000405369 WIZO95785 1651 aa15.19■□□□□ 0.02
LINC01644-201ENST00000405369 RSF1Q96T23 1441 aaPredicted RBP15.17■□□□□ 0.02
LINC01644-201ENST00000405369 TOP2AP11388 1531 aaKnown RBP15.06■□□□□ 0
LINC01644-201ENST00000405369 LAMC3Q9Y6N6 1575 aa14.91□□□□□ -0.02
LINC01644-201ENST00000405369 SUPT5HO00267 1087 aaKnown RBP14.87□□□□□ -0.03
LINC01644-201ENST00000405369 NESP48681 1621 aa14.84□□□□□ -0.03
LINC01644-201ENST00000405369 CADPSQ9ULU8 1353 aa14.83□□□□□ -0.04
LINC01644-201ENST00000405369 PRDM2Q13029 1718 aa14.83□□□□□ -0.04
LINC01644-201ENST00000405369 CCDC88BA6NC98 1476 aa14.82□□□□□ -0.04
LINC01644-201ENST00000405369 ERCC6Q03468 1493 aa14.82□□□□□ -0.04
LINC01644-201ENST00000405369 PDS5BQ9NTI5 1447 aa14.79□□□□□ -0.04
LINC01644-201ENST00000405369 CUX2O14529 1486 aa14.78□□□□□ -0.04
LINC01644-201ENST00000405369 CFTRP13569 1480 aa14.77□□□□□ -0.04
LINC01644-201ENST00000405369 KIF21AQ7Z4S6 1674 aa14.77□□□□□ -0.05
LINC01644-201ENST00000405369 FANCD2Q9BXW9 1451 aa14.68□□□□□ -0.06
LINC01644-201ENST00000405369 CEP164Q9UPV0 1460 aa14.68□□□□□ -0.06
LINC01644-201ENST00000405369 THOC2Q8NI27 1593 aaKnown RBP14.65□□□□□ -0.06
LINC01644-201ENST00000405369 TRIM41Q8WV44 630 aa14.65□□□□□ -0.06
LINC01644-201ENST00000405369 MRC2Q9UBG0 1479 aa14.62□□□□□ -0.07
LINC01644-201ENST00000405369 WDR62O43379 1518 aa14.57□□□□□ -0.08
LINC01644-201ENST00000405369 ABCC8Q09428 1581 aa14.51□□□□□ -0.09
LINC01644-201ENST00000405369 URB2Q14146 1524 aaKnown RBP14.5□□□□□ -0.09
LINC01644-201ENST00000405369 DNMBPQ6XZF7 1577 aa14.48□□□□□ -0.09
LINC01644-201ENST00000405369 TOPBP1Q92547 1522 aa14.46□□□□□ -0.1
LINC01644-201ENST00000405369 CUX1P39880 1505 aa14.37□□□□□ -0.11
LINC01644-201ENST00000405369 IFT140Q96RY7 1462 aa14.36□□□□□ -0.11
LINC01644-201ENST00000405369 BIVM-ERCC5R4GMW8 1640 aa14.34□□□□□ -0.11
LINC01644-201ENST00000405369 WRNQ14191 1432 aaPredicted RBP eCLIP14.33□□□□□ -0.11
LINC01644-201ENST00000405369 POLA1P09884 1462 aaPredicted RBP14.33□□□□□ -0.12
LINC01644-201ENST00000405369 TOP2BQ02880 1626 aa14.33□□□□□ -0.12
LINC01644-201ENST00000405369 FGD5Q6ZNL6 1462 aa14.31□□□□□ -0.12
LINC01644-201ENST00000405369 SYNJ1O43426 1573 aa14.29□□□□□ -0.12
LINC01644-201ENST00000405369 TARBP1Q13395 1621 aaKnown RBP14.29□□□□□ -0.12
LINC01644-201ENST00000405369 WDR97A6NE52 1622 aa14.27□□□□□ -0.12
LINC01644-201ENST00000405369 SOGA1O94964 1423 aa14.26□□□□□ -0.13
LINC01644-201ENST00000405369 EIF4G3O43432 1585 aaKnown RBP14.24□□□□□ -0.13
LINC01644-201ENST00000405369 RAD54L2Q9Y4B4 1467 aa14.24□□□□□ -0.13
LINC01644-201ENST00000405369 ZNF608Q9ULD9 1512 aaPredicted RBP14.21□□□□□ -0.13
LINC01644-201ENST00000405369 ABCA10Q8WWZ4 1543 aa14.2□□□□□ -0.14
LINC01644-201ENST00000405369 PBRM1Q86U86 1689 aa14.17□□□□□ -0.14
LINC01644-201ENST00000405369 ABCA5Q8WWZ7 1642 aa14.15□□□□□ -0.14
LINC01644-201ENST00000405369 AQRO60306 1485 aaKnown RBP eCLIP14.15□□□□□ -0.14
LINC01644-201ENST00000405369 TDRD9Q8NDG6 1382 aaKnown RBP14.14□□□□□ -0.15
LINC01644-201ENST00000405369 OSCARQ8IYS5 282 aa14.14□□□□□ -0.15
LINC01644-201ENST00000405369 GAPVD1Q14C86 1478 aa14.13□□□□□ -0.15
LINC01644-201ENST00000405369 GRIN2BQ13224 1484 aa14.12□□□□□ -0.15
LINC01644-201ENST00000405369 MAGI1Q96QZ7 1491 aaPredicted RBP14.09□□□□□ -0.15
LINC01644-201ENST00000405369 CHD1O14646 1710 aa14.08□□□□□ -0.16
LINC01644-201ENST00000405369 SNAPC4Q5SXM2 1469 aa14.07□□□□□ -0.16
LINC01644-201ENST00000405369 KIF27Q86VH2 1401 aa14.06□□□□□ -0.16
LINC01644-201ENST00000405369 ERICH3Q5RHP9 1530 aa14.05□□□□□ -0.16
LINC01644-201ENST00000405369 ADAMTS12P58397 1594 aa14.01□□□□□ -0.17
LINC01644-201ENST00000405369 SYNJ2O15056 1496 aa14.01□□□□□ -0.17
LINC01644-201ENST00000405369 CUL7Q14999 1698 aa14□□□□□ -0.17
LINC01644-201ENST00000405369 FBLN2P98095 1184 aa13.99□□□□□ -0.17
LINC01644-201ENST00000405369 CHMP7Q8WUX9 453 aaPredicted RBP13.98□□□□□ -0.17
LINC01644-201ENST00000405369 FHAD1B1AJZ9 1412 aa13.98□□□□□ -0.17
LINC01644-201ENST00000405369 GRIN2AQ12879 1464 aa13.93□□□□□ -0.18
LINC01644-201ENST00000405369 CHIC1Q5VXU3 224 aa13.92□□□□□ -0.18
LINC01644-201ENST00000405369 IGF1RP08069 1367 aa13.9□□□□□ -0.18
LINC01644-201ENST00000405369 EEA1Q15075 1411 aa13.9□□□□□ -0.19
LINC01644-201ENST00000405369 CARMIL1Q5VZK9 1371 aa13.87□□□□□ -0.19
LINC01644-201ENST00000405369 CYB5RLQ6IPT4 315 aa13.87□□□□□ -0.19
LINC01644-201ENST00000405369 CLASP1Q7Z460 1538 aa13.86□□□□□ -0.19
LINC01644-201ENST00000405369 RUSC2Q8N2Y8 1516 aa13.86□□□□□ -0.19
LINC01644-201ENST00000405369 RIMBP3CA6NJZ7 1639 aa13.86□□□□□ -0.19
LINC01644-201ENST00000405369 RIMBP3BA6NNM3 1639 aa13.86□□□□□ -0.19
LINC01644-201ENST00000405369 RIMBP3Q9UFD9 1639 aa13.86□□□□□ -0.19
LINC01644-201ENST00000405369 NUP160Q12769 1436 aa13.85□□□□□ -0.19
LINC01644-201ENST00000405369 TRHP20396 242 aaPredicted RBP13.85□□□□□ -0.19
LINC01644-201ENST00000405369 AEBP2Q6ZN18 517 aaPredicted RBP13.85□□□□□ -0.19
LINC01644-201ENST00000405369 CEP170Q5SW79 1584 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms